| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833590
Identifier: 110833590
GI number: 110833590
Start: 819089
End: 820147
Strand: Direct
Name: 110833590
Synonym: ABO_0729
Alternate gene names: NA
Gene position: 819089-820147 (Clockwise)
Preceding gene: 110833589
Following gene: 110833591
Centisome position: 26.25
GC content: 54.86
Gene sequence:
>1059_bases ATGAAAAATAGTAGAGAGCCTAAAAATACCCCCTTCGAGATCAACGGCATTACGGTTCAGCCCGGCACTCGGGCGAAAGT GGAATTGCCGTTAGCGCAGCTTTATACCCAAACACCGTTAAACGTACCGATCCATGTGATTCATGGGCGTAAGCCGGGAC CGGTATTTATGGTCAGCGCGGCTATCCATGGAGACGAACTGAACGGCGTGGAAATCATTCGCCGCCTGTTGCGCCACTCC GCATTAAAGAACCTTAGCGGTACCGTGCTGGCGGTGCCGGTGGTGAATGTGTTCGGCTTTATCCATAAATCCCGTTACCT GCCGGATCGCCGGGACTTGAATCGCTGTTTTCCCGGTTCTGAAACCGGCAGCTTGGGCGCGCGAATGGCGTGGCAGTTCA AGACTCAAGTGCTGGACCGGGTTAGCTATGCGGTGGACTTGCATACCGGCGCTATTCATCGCGATAACCTGCCACAAATT CGGGCTAATCTGTCCAACGAAGATACCGGTGCCATGGCTAACGCCTTTGGCGTGCCGGTGGTGATTAACTCGGTACTGGG CGAAGGCACCTTGCGCGAAGTGGCAGAAGCTCAAGGCATTCCGGTGATTACCTATGAAGCTGGCGAAGCGTTGCGCTTTG ATGAATCCTGTATTCGTGCCGGCGTCAAAGGCGTGCTCAATGTCATGCATCACCTAGGAATGACCGGTAGCCGCCGTACC AAAGCCCCGCGTGAGCCTTATATTGCTCGTTCTTCAAGCTGGGTCCGTGCGGAACGCGACGGTGTGTTCTTGTCACTGGT GGCGCTGGGTGCGTGGATTAAAAGCGGCGATTTGATCGGTCGCATTTCCAGCCCGTTTGGTGGCGACGACGTGGATATTA TTTCTCCCGCATCGGGCATTCTGGTGGGTCGCAATAACTTGCCGCTGGTGAATGAAGGCGAAGCCTTGTATCACATTGCT CGTTTCGAGGAAGTCAGTGAAGTGGCGGAGTCACTGGAAGTCTTTACCTCGGATATCGAAGACGGGCCGACGCAATCCGG GCAGCTGCCGATTGTATAG
Upstream 100 bases:
>100_bases CCCCTTGAGGGACGAAATGGGTAGGCGCCATTGGCCTCTTAAGGGCTCCTGCAGGGAGATCTTTAGCACAACGGTTTTTC TCTAAGGTATTGAATAAAAA
Downstream 100 bases:
>100_bases AGCATAGAGCATGGCGCGTTGAATTGAGTCAGGAAAGAATGGGGCTCGCTGTTCGTGGTAACGGCTTAACGCTTTACAAG GCTCCTTATGCCGGTTTGCG
Product: deacylase
Products: NA
Alternate protein names: Deacylase; Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; Deacylase-Like; Succinylglutamate Desuccinylase; Succinylglutamate Desuccinylase/Aspartoacylase Family; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKNSREPKNTPFEINGITVQPGTRAKVELPLAQLYTQTPLNVPIHVIHGRKPGPVFMVSAAIHGDELNGVEIIRRLLRHS ALKNLSGTVLAVPVVNVFGFIHKSRYLPDRRDLNRCFPGSETGSLGARMAWQFKTQVLDRVSYAVDLHTGAIHRDNLPQI RANLSNEDTGAMANAFGVPVVINSVLGEGTLREVAEAQGIPVITYEAGEALRFDESCIRAGVKGVLNVMHHLGMTGSRRT KAPREPYIARSSSWVRAERDGVFLSLVALGAWIKSGDLIGRISSPFGGDDVDIISPASGILVGRNNLPLVNEGEALYHIA RFEEVSEVAESLEVFTSDIEDGPTQSGQLPIV
Sequences:
>Translated_352_residues MKNSREPKNTPFEINGITVQPGTRAKVELPLAQLYTQTPLNVPIHVIHGRKPGPVFMVSAAIHGDELNGVEIIRRLLRHS ALKNLSGTVLAVPVVNVFGFIHKSRYLPDRRDLNRCFPGSETGSLGARMAWQFKTQVLDRVSYAVDLHTGAIHRDNLPQI RANLSNEDTGAMANAFGVPVVINSVLGEGTLREVAEAQGIPVITYEAGEALRFDESCIRAGVKGVLNVMHHLGMTGSRRT KAPREPYIARSSSWVRAERDGVFLSLVALGAWIKSGDLIGRISSPFGGDDVDIISPASGILVGRNNLPLVNEGEALYHIA RFEEVSEVAESLEVFTSDIEDGPTQSGQLPIV >Mature_352_residues MKNSREPKNTPFEINGITVQPGTRAKVELPLAQLYTQTPLNVPIHVIHGRKPGPVFMVSAAIHGDELNGVEIIRRLLRHS ALKNLSGTVLAVPVVNVFGFIHKSRYLPDRRDLNRCFPGSETGSLGARMAWQFKTQVLDRVSYAVDLHTGAIHRDNLPQI RANLSNEDTGAMANAFGVPVVINSVLGEGTLREVAEAQGIPVITYEAGEALRFDESCIRAGVKGVLNVMHHLGMTGSRRT KAPREPYIARSSSWVRAERDGVFLSLVALGAWIKSGDLIGRISSPFGGDDVDIISPASGILVGRNNLPLVNEGEALYHIA RFEEVSEVAESLEVFTSDIEDGPTQSGQLPIV
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38233; Mature: 38233
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSREPKNTPFEINGITVQPGTRAKVELPLAQLYTQTPLNVPIHVIHGRKPGPVFMVSA CCCCCCCCCCCEEEEEEEECCCCCCEEECCHHHHHHCCCCCCCEEEEECCCCCCEEEEEE AIHGDELNGVEIIRRLLRHSALKNLSGTVLAVPVVNVFGFIHKSRYLPDRRDLNRCFPGS EECCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHCCCCC ETGSLGARMAWQFKTQVLDRVSYAVDLHTGAIHRDNLPQIRANLSNEDTGAMANAFGVPV CCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHCCHHH VINSVLGEGTLREVAEAQGIPVITYEAGEALRFDESCIRAGVKGVLNVMHHLGMTGSRRT HHHHHHCCCHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC KAPREPYIARSSSWVRAERDGVFLSLVALGAWIKSGDLIGRISSPFGGDDVDIISPASGI CCCCCCCEECCCCCEEECCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCE LVGRNNLPLVNEGEALYHIARFEEVSEVAESLEVFTSDIEDGPTQSGQLPIV EEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKNSREPKNTPFEINGITVQPGTRAKVELPLAQLYTQTPLNVPIHVIHGRKPGPVFMVSA CCCCCCCCCCCEEEEEEEECCCCCCEEECCHHHHHHCCCCCCCEEEEECCCCCCEEEEEE AIHGDELNGVEIIRRLLRHSALKNLSGTVLAVPVVNVFGFIHKSRYLPDRRDLNRCFPGS EECCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHCCCCC ETGSLGARMAWQFKTQVLDRVSYAVDLHTGAIHRDNLPQIRANLSNEDTGAMANAFGVPV CCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHCCHHH VINSVLGEGTLREVAEAQGIPVITYEAGEALRFDESCIRAGVKGVLNVMHHLGMTGSRRT HHHHHHCCCHHHHHHHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCC KAPREPYIARSSSWVRAERDGVFLSLVALGAWIKSGDLIGRISSPFGGDDVDIISPASGI CCCCCCCEECCCCCEEECCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCCEEECCCCCE LVGRNNLPLVNEGEALYHIARFEEVSEVAESLEVFTSDIEDGPTQSGQLPIV EEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA