Click here to switch to the map view.

The map label for this gene is dctQ

Identifier: 110833550

GI number: 110833550

Start: 765498

End: 766007

Strand: Direct

Name: dctQ

Synonym: ABO_0689

Alternate gene names: NA

Gene position: 765498-766007 (Clockwise)

Preceding gene: 110833549

Following gene: 110833551

Centisome position: 24.53

GC content: 48.82

Gene sequence:

>510_bases
ATGATGGCTGCACTATTACGTAGGGTGCATCGCGCCCTTCATCATATCGAGGACGGCCTTATTGTGGCCGTTCTTTTGTT
TATGATTCTGCTGGCTGTGGCGCAAATTGTGTTGCGTAACTTTTTTGGTACCAGCTTGGTATGGATTGAGCCCTTACTGC
AGAACGCGGTGCTGTGGATTGGTTTGTTAGGAGCCATGATCGCTTCACGTAATGATGAGCACATTCGCATTGATGTGGCT
TCATCGTTATTGCCAGAAAAATATCACCCGTTCCTGACTACATTTGTAGACCTGTTTACCGCCTTTATCTGTTTGTTGGT
TGCTTGGTACAGCGTGCAATTCGTGATTGAAGAATATGAGTACGCCACGCCAGCGTTTGCCAGTGTGCCCAGCTGGTTGT
TGCAAGCGATTATTCCAGTGGGCTTCTCGGTCATGGCCTTGCGCTATGTGGTGTTGTTTGCGATGGGGTTGATTGGTAAA
CGGCCGAAGATGCAGGAGCTGACGCCATGA

Upstream 100 bases:

>100_bases
ATGCCGAGCACGCCACCGCTGAACTGGTGGAAGAGGGCGAAATCAGCCAAGCCATGCTGGATCGGCTTAATGGCATTCTT
GCCAAGCAACGCGACGGGCA

Downstream 100 bases:

>100_bases
TTACAGCGGCGATTATCCTGCTGGTGGTATTGGCGTTAATGGGCGCGCCTTTGTTTGCCATTATTCTTGGCGCGGCAGCA
CTGGGGTTTTATACCCTAGA

Product: TRAP C4-dicarboxylate transporter

Products: NA

Alternate protein names: TRAP C4-Dicarboxylate Transporter; Tripartite ATP-Independent Periplasmic Transporter DctQ

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MMAALLRRVHRALHHIEDGLIVAVLLFMILLAVAQIVLRNFFGTSLVWIEPLLQNAVLWIGLLGAMIASRNDEHIRIDVA
SSLLPEKYHPFLTTFVDLFTAFICLLVAWYSVQFVIEEYEYATPAFASVPSWLLQAIIPVGFSVMALRYVVLFAMGLIGK
RPKMQELTP

Sequences:

>Translated_169_residues
MMAALLRRVHRALHHIEDGLIVAVLLFMILLAVAQIVLRNFFGTSLVWIEPLLQNAVLWIGLLGAMIASRNDEHIRIDVA
SSLLPEKYHPFLTTFVDLFTAFICLLVAWYSVQFVIEEYEYATPAFASVPSWLLQAIIPVGFSVMALRYVVLFAMGLIGK
RPKMQELTP
>Mature_169_residues
MMAALLRRVHRALHHIEDGLIVAVLLFMILLAVAQIVLRNFFGTSLVWIEPLLQNAVLWIGLLGAMIASRNDEHIRIDVA
SSLLPEKYHPFLTTFVDLFTAFICLLVAWYSVQFVIEEYEYATPAFASVPSWLLQAIIPVGFSVMALRYVVLFAMGLIGK
RPKMQELTP

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19099; Mature: 19099

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAALLRRVHRALHHIEDGLIVAVLLFMILLAVAQIVLRNFFGTSLVWIEPLLQNAVLWI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GLLGAMIASRNDEHIRIDVASSLLPEKYHPFLTTFVDLFTAFICLLVAWYSVQFVIEEYE
HHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YATPAFASVPSWLLQAIIPVGFSVMALRYVVLFAMGLIGKRPKMQELTP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMAALLRRVHRALHHIEDGLIVAVLLFMILLAVAQIVLRNFFGTSLVWIEPLLQNAVLWI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
GLLGAMIASRNDEHIRIDVASSLLPEKYHPFLTTFVDLFTAFICLLVAWYSVQFVIEEYE
HHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YATPAFASVPSWLLQAIIPVGFSVMALRYVVLFAMGLIGKRPKMQELTP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA