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The map label for this gene is dctP [H]

Identifier: 110833549

GI number: 110833549

Start: 764512

End: 765501

Strand: Direct

Name: dctP [H]

Synonym: ABO_0688

Alternate gene names: 110833549

Gene position: 764512-765501 (Clockwise)

Preceding gene: 110833548

Following gene: 110833550

Centisome position: 24.5

GC content: 53.94

Gene sequence:

>990_bases
ATGCTGCGCCTTGCCACGATTCTGATCGTGTTGTTCCCGCTGGTTGCCACCGCTGCGACCACCCTGAAAATTTCCACTCT
GTACCCGGATGGCACCACCATTGTTTCTGGGCTAAAAAAAGCCGGTAAAGATATTGCTGCGCAAACCGATGGCCGAGTGA
AACTGAAAATTTATCCCGGCGGGGTGATGGGCGATGACCGCGCGGTTGAACGCAAAATCCGTATTGGCCAGCTCCACGGC
CTGGTGGCCCAAGGCGGGGCTTTTTCCTCCGCGTACAAAGACAGCCAGATTCTCAATGTCCCGTTGGCTTTTAATAATTA
CGATGAAGTGGATGCGGTACGCAGTGAACTGGACCCGGTAATTCAAAAGGGCCTGGAAGACGGTGGCTGGGTCAGCTTCG
GTTTGCTGGATGGCGGGTTTGCTTATGTGATGTCTGAGCAGCCGGTAAAAAGTATTGCCGATTTGCGTGAACAAAAACTG
TGGTTGCCGGCGAATGATGAAGCCTCTGCTAAGGCGGCCAAGGCTTTCGAGCTGTCACCGATTATGCTCAATATTGGCTC
TGTGCTGACCTCCCTGCAAACCGGTGCGGTGAATGCTTTTGCTGCGCCCCCTGTCGCGGCGCTGACTCTGCAGTGGTACT
CCCGAGTAAACTATCTGACCGACATGCCGCTGCTCTATACCTTTGGCATGCTGGGTATCCACGAAAAGTACTTTAAACGC
ATCAGCGCGGAAGACCAGAAAGTGGTTCGCGCCATACTGGATGGCACCTTTGACACCCTGAATGCGAAAAGTCGCGAGGA
AAACCTAAGCGCTTTTGCCGCTGTTCAACAACAGGGGTTGGAAGTGATCAAACCGAACGAAGAACAGCGCAAGGAATGGC
ACCGTTATGCCGAGCACGCCACCGCTGAACTGGTGGAAGAGGGCGAAATCAGCCAAGCCATGCTGGATCGGCTTAATGGC
ATTCTTGCCAAGCAACGCGACGGGCAATGA

Upstream 100 bases:

>100_bases
CGGATCCTGATGTCCACGGCCTGACCCTGCAAAATACCTATGCGCAGCAGCAGGCTGAAGCCCTGCTTGCCGACGCGGAT
GATTATTTCTAGGAGTGTTT

Downstream 100 bases:

>100_bases
TGGCTGCACTATTACGTAGGGTGCATCGCGCCCTTCATCATATCGAGGACGGCCTTATTGTGGCCGTTCTTTTGTTTATG
ATTCTGCTGGCTGTGGCGCA

Product: TRAP dicarboxylate transporter

Products: NA

Alternate protein names: Extracytoplasmic solute receptor protein siaP; N-acetylneuraminic-binding protein; Neu5Ac-binding protein [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MLRLATILIVLFPLVATAATTLKISTLYPDGTTIVSGLKKAGKDIAAQTDGRVKLKIYPGGVMGDDRAVERKIRIGQLHG
LVAQGGAFSSAYKDSQILNVPLAFNNYDEVDAVRSELDPVIQKGLEDGGWVSFGLLDGGFAYVMSEQPVKSIADLREQKL
WLPANDEASAKAAKAFELSPIMLNIGSVLTSLQTGAVNAFAAPPVAALTLQWYSRVNYLTDMPLLYTFGMLGIHEKYFKR
ISAEDQKVVRAILDGTFDTLNAKSREENLSAFAAVQQQGLEVIKPNEEQRKEWHRYAEHATAELVEEGEISQAMLDRLNG
ILAKQRDGQ

Sequences:

>Translated_329_residues
MLRLATILIVLFPLVATAATTLKISTLYPDGTTIVSGLKKAGKDIAAQTDGRVKLKIYPGGVMGDDRAVERKIRIGQLHG
LVAQGGAFSSAYKDSQILNVPLAFNNYDEVDAVRSELDPVIQKGLEDGGWVSFGLLDGGFAYVMSEQPVKSIADLREQKL
WLPANDEASAKAAKAFELSPIMLNIGSVLTSLQTGAVNAFAAPPVAALTLQWYSRVNYLTDMPLLYTFGMLGIHEKYFKR
ISAEDQKVVRAILDGTFDTLNAKSREENLSAFAAVQQQGLEVIKPNEEQRKEWHRYAEHATAELVEEGEISQAMLDRLNG
ILAKQRDGQ
>Mature_329_residues
MLRLATILIVLFPLVATAATTLKISTLYPDGTTIVSGLKKAGKDIAAQTDGRVKLKIYPGGVMGDDRAVERKIRIGQLHG
LVAQGGAFSSAYKDSQILNVPLAFNNYDEVDAVRSELDPVIQKGLEDGGWVSFGLLDGGFAYVMSEQPVKSIADLREQKL
WLPANDEASAKAAKAFELSPIMLNIGSVLTSLQTGAVNAFAAPPVAALTLQWYSRVNYLTDMPLLYTFGMLGIHEKYFKR
ISAEDQKVVRAILDGTFDTLNAKSREENLSAFAAVQQQGLEVIKPNEEQRKEWHRYAEHATAELVEEGEISQAMLDRLNG
ILAKQRDGQ

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid. This protein specifically binds sialic acid [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35984; Mature: 35984

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLATILIVLFPLVATAATTLKISTLYPDGTTIVSGLKKAGKDIAAQTDGRVKLKIYPG
CHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCHHHCCCCCEEEEEEECC
GVMGDDRAVERKIRIGQLHGLVAQGGAFSSAYKDSQILNVPLAFNNYDEVDAVRSELDPV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHH
IQKGLEDGGWVSFGLLDGGFAYVMSEQPVKSIADLREQKLWLPANDEASAKAAKAFELSP
HHHCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCH
IMLNIGSVLTSLQTGAVNAFAAPPVAALTLQWYSRVNYLTDMPLLYTFGMLGIHEKYFKR
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ISAEDQKVVRAILDGTFDTLNAKSREENLSAFAAVQQQGLEVIKPNEEQRKEWHRYAEHA
HCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHH
TAELVEEGEISQAMLDRLNGILAKQRDGQ
HHHHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRLATILIVLFPLVATAATTLKISTLYPDGTTIVSGLKKAGKDIAAQTDGRVKLKIYPG
CHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHCCHHHCCCCCEEEEEEECC
GVMGDDRAVERKIRIGQLHGLVAQGGAFSSAYKDSQILNVPLAFNNYDEVDAVRSELDPV
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHH
IQKGLEDGGWVSFGLLDGGFAYVMSEQPVKSIADLREQKLWLPANDEASAKAAKAFELSP
HHHCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCH
IMLNIGSVLTSLQTGAVNAFAAPPVAALTLQWYSRVNYLTDMPLLYTFGMLGIHEKYFKR
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ISAEDQKVVRAILDGTFDTLNAKSREENLSAFAAVQQQGLEVIKPNEEQRKEWHRYAEHA
HCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHH
TAELVEEGEISQAMLDRLNGILAKQRDGQ
HHHHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA