| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yhjG [H]
Identifier: 110833521
GI number: 110833521
Start: 730868
End: 732436
Strand: Direct
Name: yhjG [H]
Synonym: ABO_0660
Alternate gene names: 110833521
Gene position: 730868-732436 (Clockwise)
Preceding gene: 110833519
Following gene: 110833524
Centisome position: 23.42
GC content: 58.32
Gene sequence:
>1569_bases TTGCGCCGTCATGGCATTGATTGTTGCATTATTGACAGGCTGGATGCGCCATCGCCGTATTCGCGCGCCTTGGGGTTACA TGCTCGAACGCTGGAGATTTTCGATGCGCTGGAGGTGCTGCCGTCGATTCGTAAGGTGTCGAGGCGGCTCAAGGCGGTAT CAGTGTATGGCGATAAGGGTTTTCTCTTGGAGTTGGATCTCACCACTTTGAAAGCGCCATACCCGTGGGTGCTCAGTTGC CCGCAATCCGAGGTGGAAACCGTGCTGATTGATCGTTACCGGATGCTGGGGGGGGAATTGATCCGCAGCGCGGAGCTGCT GGATTTTCGTCAGGATGGTCGCGGCGTCGAGGCGCGTATTCGTCAGGGTTCGGATGTGCAGAAGCTGCAGTGCGAATTGC TGGTCGGTGCCGATGGTGTGGGTTCTATCGTCCGGGAACAGCTGGGCATTGGTTTCAATGGCGTGGATTATAAGGAACAT TTCCTGTTGGCGGATGTGCTCTGGGAGGCCCCTTGGAGTAATGATCGCTCTCACGGGTTCCTGCAGGAAGAAGGCTTGTT ATTGGCATTGCCGCTGCCGCAGGGCTGGCGGTTGATTATGGCCCGTCGCGAGCCGCCGACATTGCCGTTAAGTTTAGCTC TCTTCACTGAACGGCTCACGTCGATTCTGGGGGAGGCACCGAATCTGGGTGAACCCCGTTGGCTCAGCCAGTTTTCCGTG CAGCGCCGGCTGGCCCAGCATTTTCGCCGCAACCGGGTGTTTCTGGCCGGGGATGCGGCCCATGTGCAAAGCCCGCTGGG CGCACAAGGGATGAATACGGGCCTGGCTGATGCCTTCAACCTGAGCTGGAAACTGGCGTTTTATCTGAAAGGATTTGGGC AGGGCGCTTTGCTAGACAGTTATGAGCAGGAACGGCGCCCGGTGGCGGAGAAAATGTTGTACGGCGTGGACATGCTATCG CGGGCTTCATTGGTGAAGTTGCCGATGCTGCGACGCAGCCGGGATTCGCTGCTGAAACTGGCGGGTAGCCGTCGTAATAT CTCCAGTCGTTTGTTGCGCACTGCCAGTCAGTTGAATGTGCACTATCGCAACTCGCCGCTGGTTACCTATGGCCCGGAAG CGGATGTTGGTTGGCGGCATCAAGGGCCGCTACCGGGGGATCGGCTACCGGATGCGGCGCTGAAATCCGTGCGGACCGGG CATCTGCATCAGTTGCATGGCTTGCTGCGTAAGCCCGTGCATCATTTGTTATTGCAGCTGAGTGAGAGTCCTGAGCATAA CGAGCGGCTGGTGATGTATGCGCTGAGTGAGCGACTCGGGCAAGAGTATCGCGAAAGCGTGCATCTGACCGTGATTGCGG CGCGTGCCACCGCCGATGATGACGTGCCCCGTGAAGGCACCACCCGTATCTGGCGTGACCATGAGGGCGAGTTCGCTAGC GCCTTTGGCGATAAAGGCCGGCTTTGGTTGATGCGGCCGGATGGGCATTTAGCGTACCGGGCACCGGTGAGCAATGCGGA TGATTTGCTGGGTTATCTGAGGAGAGTGGTTGGGAAGGCTAACAGCTGA
Upstream 100 bases:
>100_bases AGTGACATAAGGAGAGTGTACCATCGCCGTTACCGAGAACCGCACAGCGCAGGTATTGATTGTTGGTGCCGGCCCTACTG GGTTGGCGCTGGGTATTGGT
Downstream 100 bases:
>100_bases AACGAAGAAGGAGCGAGGTGTTTCTCGTTAGCCCCAAAGGCGTAATCGGACACCTCACTTTATCGAATACGAGAGCGACT ACGCCACACGCCGCCAGCGT
Product: oxidoreductase
Products: H2O; 3-(2,3-dihydroxyphenyl)propionate; NAD [C]
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MRRHGIDCCIIDRLDAPSPYSRALGLHARTLEIFDALEVLPSIRKVSRRLKAVSVYGDKGFLLELDLTTLKAPYPWVLSC PQSEVETVLIDRYRMLGGELIRSAELLDFRQDGRGVEARIRQGSDVQKLQCELLVGADGVGSIVREQLGIGFNGVDYKEH FLLADVLWEAPWSNDRSHGFLQEEGLLLALPLPQGWRLIMARREPPTLPLSLALFTERLTSILGEAPNLGEPRWLSQFSV QRRLAQHFRRNRVFLAGDAAHVQSPLGAQGMNTGLADAFNLSWKLAFYLKGFGQGALLDSYEQERRPVAEKMLYGVDMLS RASLVKLPMLRRSRDSLLKLAGSRRNISSRLLRTASQLNVHYRNSPLVTYGPEADVGWRHQGPLPGDRLPDAALKSVRTG HLHQLHGLLRKPVHHLLLQLSESPEHNERLVMYALSERLGQEYRESVHLTVIAARATADDDVPREGTTRIWRDHEGEFAS AFGDKGRLWLMRPDGHLAYRAPVSNADDLLGYLRRVVGKANS
Sequences:
>Translated_522_residues MRRHGIDCCIIDRLDAPSPYSRALGLHARTLEIFDALEVLPSIRKVSRRLKAVSVYGDKGFLLELDLTTLKAPYPWVLSC PQSEVETVLIDRYRMLGGELIRSAELLDFRQDGRGVEARIRQGSDVQKLQCELLVGADGVGSIVREQLGIGFNGVDYKEH FLLADVLWEAPWSNDRSHGFLQEEGLLLALPLPQGWRLIMARREPPTLPLSLALFTERLTSILGEAPNLGEPRWLSQFSV QRRLAQHFRRNRVFLAGDAAHVQSPLGAQGMNTGLADAFNLSWKLAFYLKGFGQGALLDSYEQERRPVAEKMLYGVDMLS RASLVKLPMLRRSRDSLLKLAGSRRNISSRLLRTASQLNVHYRNSPLVTYGPEADVGWRHQGPLPGDRLPDAALKSVRTG HLHQLHGLLRKPVHHLLLQLSESPEHNERLVMYALSERLGQEYRESVHLTVIAARATADDDVPREGTTRIWRDHEGEFAS AFGDKGRLWLMRPDGHLAYRAPVSNADDLLGYLRRVVGKANS >Mature_522_residues MRRHGIDCCIIDRLDAPSPYSRALGLHARTLEIFDALEVLPSIRKVSRRLKAVSVYGDKGFLLELDLTTLKAPYPWVLSC PQSEVETVLIDRYRMLGGELIRSAELLDFRQDGRGVEARIRQGSDVQKLQCELLVGADGVGSIVREQLGIGFNGVDYKEH FLLADVLWEAPWSNDRSHGFLQEEGLLLALPLPQGWRLIMARREPPTLPLSLALFTERLTSILGEAPNLGEPRWLSQFSV QRRLAQHFRRNRVFLAGDAAHVQSPLGAQGMNTGLADAFNLSWKLAFYLKGFGQGALLDSYEQERRPVAEKMLYGVDMLS RASLVKLPMLRRSRDSLLKLAGSRRNISSRLLRTASQLNVHYRNSPLVTYGPEADVGWRHQGPLPGDRLPDAALKSVRTG HLHQLHGLLRKPVHHLLLQLSESPEHNERLVMYALSERLGQEYRESVHLTVIAARATADDDVPREGTTRIWRDHEGEFAS AFGDKGRLWLMRPDGHLAYRAPVSNADDLLGYLRRVVGKANS
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pheA/tfdB FAD monooxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786543, Length=324, Percent_Identity=27.7777777777778, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1789273, Length=256, Percent_Identity=30.078125, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: 1.14.13.- [C]
Molecular weight: Translated: 58716; Mature: 58716
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHGIDCCIIDRLDAPSPYSRALGLHARTLEIFDALEVLPSIRKVSRRLKAVSVYGDKG CCCCCCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC FLLELDLTTLKAPYPWVLSCPQSEVETVLIDRYRMLGGELIRSAELLDFRQDGRGVEARI EEEEEEHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RQGSDVQKLQCELLVGADGVGSIVREQLGIGFNGVDYKEHFLLADVLWEAPWSNDRSHGF CCCCCHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC LQEEGLLLALPLPQGWRLIMARREPPTLPLSLALFTERLTSILGEAPNLGEPRWLSQFSV CCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH QRRLAQHFRRNRVFLAGDAAHVQSPLGAQGMNTGLADAFNLSWKLAFYLKGFGQGALLDS HHHHHHHHHHCEEEEECCHHHHCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCHHHH YEQERRPVAEKMLYGVDMLSRASLVKLPMLRRSRDSLLKLAGSRRNISSRLLRTASQLNV HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEE HYRNSPLVTYGPEADVGWRHQGPLPGDRLPDAALKSVRTGHLHQLHGLLRKPVHHLLLQL EECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SESPEHNERLVMYALSERLGQEYRESVHLTVIAARATADDDVPREGTTRIWRDHEGEFAS CCCCCCCCCEEHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCHHHCCCCCCHHH AFGDKGRLWLMRPDGHLAYRAPVSNADDLLGYLRRVVGKANS HCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRRHGIDCCIIDRLDAPSPYSRALGLHARTLEIFDALEVLPSIRKVSRRLKAVSVYGDKG CCCCCCCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC FLLELDLTTLKAPYPWVLSCPQSEVETVLIDRYRMLGGELIRSAELLDFRQDGRGVEARI EEEEEEHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH RQGSDVQKLQCELLVGADGVGSIVREQLGIGFNGVDYKEHFLLADVLWEAPWSNDRSHGF CCCCCHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC LQEEGLLLALPLPQGWRLIMARREPPTLPLSLALFTERLTSILGEAPNLGEPRWLSQFSV CCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH QRRLAQHFRRNRVFLAGDAAHVQSPLGAQGMNTGLADAFNLSWKLAFYLKGFGQGALLDS HHHHHHHHHHCEEEEECCHHHHCCCCCCCCCCCCCCHHHCCCEEEEEEEECCCCCCHHHH YEQERRPVAEKMLYGVDMLSRASLVKLPMLRRSRDSLLKLAGSRRNISSRLLRTASQLNV HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCEE HYRNSPLVTYGPEADVGWRHQGPLPGDRLPDAALKSVRTGHLHQLHGLLRKPVHHLLLQL EECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH SESPEHNERLVMYALSERLGQEYRESVHLTVIAARATADDDVPREGTTRIWRDHEGEFAS CCCCCCCCCEEHHHHHHHHHHHHHHCEEEEEEEEECCCCCCCCCCCCCHHHCCCCCCHHH AFGDKGRLWLMRPDGHLAYRAPVSNADDLLGYLRRVVGKANS HCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3-(3-hydroxyphenyl)propionate; NADH; O2 [C]
Specific reaction: 3-(3-hydroxyphenyl)propionate + NADH + O2 = H2O + 3-(2,3-dihydroxyphenyl)propionate + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]