BacMap

Definition	Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession	NC_008260
Length	3,120,143

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The map label for this gene is fabG [H]

Identifier: 110833524

GI number: 110833524

Start: 733926

End: 734696

Strand: Direct

Name: fabG [H]

Synonym: ABO_0663

Alternate gene names: 110833524

Gene position: 733926-734696 (Clockwise)

Preceding gene: 110833521

Following gene: 110833525

Centisome position: 23.52

GC content: 43.19

Gene sequence:

>771_bases
ATGAAAAATTCTAGTATTGCTTTGATTATTGGTGGATCCAGTGGCATAGGCCTGGCAACCGCAAAGCAATTAGTCGCTCA
GGGTATCAAGACGGTCATTTTGGGAAGAAATGAGGCGAAGCTGAAAGCGGCTAAAGCAGAGCTTGAGACCATTGCTAATA
GCGATGCGGTAGAAACAATACAGGCTAATCTCTATGATCAAAGTGATGTAGATGCCGTTAATAACAAAATAAACAACGAG
GAGCGGCACATAAAATACCTTGTAAACGCTGCGGGATATTTTAACCCTAAGCCATTTATTGAGCACACAGTAGATGACTA
TGATACTTATTCTGTAGTAAATCGCGCTATGTTTTTTATCAGTCAATCCGTCACAAGGAACATGATCGATAACGGTGGTG
GGGCTGTTGTGAATGTTGGTTCTATGTGGGCTAAGCAAGCGATTAAAGCAACACCTTCTTCTGCGTACTCAATGGCTAAA
GCTGGTTTGCATGCTTTAACGCAACATATGGCAATGGAACTCGCTGAATACAATATTAGAGTTAACGCCGTCTCTCCTGC
GGTGGTAAAAACGCCCATTTATGAAGCATTTATTGACCCCGCGGAAATGGATGATGCCTTAGCAGGATTTAATGACTTTC
ATCCGATCGGTCGAATAGGGTCACCCGATGATATTGCGAATAGCATTATGTTTCTCTTAAATTCTGGATCCAGCTGGGTA
ACTGGCGCTATTTGGGATGTAGATGGGGGCGTTATGGCGGGTAGGAACTAA

Upstream 100 bases:

>100_bases
TACCCAAAAGTGCCTACCTTACCCAAAGGTGCTTACTTTCTTATTGTCTCAATGATTGTCTAAATTGTCTCTATCAAATA
ACACCTCTAGGAGATATGAC

Downstream 100 bases:

>100_bases
AAAATAGGTTAGGCACGCAACATGACGATACGAATAAATGCAGATTTTTCACAACGCATCGTGGTTCAACCTAGTGACTA
TCACTGGGTTGAATCCCCGA

Product: oxidoreductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKNSSIALIIGGSSGIGLATAKQLVAQGIKTVILGRNEAKLKAAKAELETIANSDAVETIQANLYDQSDVDAVNNKINNE
ERHIKYLVNAAGYFNPKPFIEHTVDDYDTYSVVNRAMFFISQSVTRNMIDNGGGAVVNVGSMWAKQAIKATPSSAYSMAK
AGLHALTQHMAMELAEYNIRVNAVSPAVVKTPIYEAFIDPAEMDDALAGFNDFHPIGRIGSPDDIANSIMFLLNSGSSWV
TGAIWDVDGGVMAGRN

Sequences:

>Translated_256_residues
MKNSSIALIIGGSSGIGLATAKQLVAQGIKTVILGRNEAKLKAAKAELETIANSDAVETIQANLYDQSDVDAVNNKINNE
ERHIKYLVNAAGYFNPKPFIEHTVDDYDTYSVVNRAMFFISQSVTRNMIDNGGGAVVNVGSMWAKQAIKATPSSAYSMAK
AGLHALTQHMAMELAEYNIRVNAVSPAVVKTPIYEAFIDPAEMDDALAGFNDFHPIGRIGSPDDIANSIMFLLNSGSSWV
TGAIWDVDGGVMAGRN
>Mature_256_residues
MKNSSIALIIGGSSGIGLATAKQLVAQGIKTVILGRNEAKLKAAKAELETIANSDAVETIQANLYDQSDVDAVNNKINNE
ERHIKYLVNAAGYFNPKPFIEHTVDDYDTYSVVNRAMFFISQSVTRNMIDNGGGAVVNVGSMWAKQAIKATPSSAYSMAK
AGLHALTQHMAMELAEYNIRVNAVSPAVVKTPIYEAFIDPAEMDDALAGFNDFHPIGRIGSPDDIANSIMFLLNSGSSWV
TGAIWDVDGGVMAGRN

Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=32.9317269076305, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=27.5303643724696, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=25.6704980842912, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=28.0769230769231, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI32483357, Length=258, Percent_Identity=26.7441860465116, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=28.6885245901639, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=27.6679841897233, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI109715829, Length=235, Percent_Identity=23.8297872340426, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI4758504, Length=259, Percent_Identity=26.2548262548263, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI126723750, Length=259, Percent_Identity=23.9382239382239, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4503301, Length=232, Percent_Identity=25.8620689655172, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI66933014, Length=226, Percent_Identity=26.1061946902655, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI59889578, Length=246, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1790717, Length=249, Percent_Identity=29.718875502008, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI2367175, Length=259, Percent_Identity=29.7297297297297, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=29.4354838709677, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788459, Length=251, Percent_Identity=29.4820717131474, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=29.5546558704453, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=30.7086614173228, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=28.1124497991968, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=29.296875, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI87082160, Length=251, Percent_Identity=26.6932270916335, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=23.7354085603113, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=27.8225806451613, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787820, Length=186, Percent_Identity=22.5806451612903, Blast_Score=61, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=257, Percent_Identity=34.2412451361868, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=255, Percent_Identity=31.3725490196078, Blast_Score=103, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=31.496062992126, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=30.1204819277108, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17531453, Length=258, Percent_Identity=32.5581395348837, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=32.03125, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=32.1138211382114, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=31.0344827586207, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71994604, Length=263, Percent_Identity=29.6577946768061, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=258, Percent_Identity=29.8449612403101, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17560150, Length=253, Percent_Identity=30.8300395256917, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=27.7777777777778, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=257, Percent_Identity=29.1828793774319, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562908, Length=257, Percent_Identity=30.3501945525292, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=29.4339622641509, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17562990, Length=253, Percent_Identity=30.0395256916996, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=253, Percent_Identity=31.2252964426877, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=255, Percent_Identity=30.1960784313725, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI72000259, Length=256, Percent_Identity=31.25, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=259, Percent_Identity=30.5019305019305, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=258, Percent_Identity=30.6201550387597, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=29.6992481203008, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=28.1746031746032, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=28.3582089552239, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=258, Percent_Identity=25.968992248062, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=258, Percent_Identity=28.2945736434109, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=204, Percent_Identity=28.4313725490196, Blast_Score=70, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6324126, Length=258, Percent_Identity=28.2945736434109, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=30.8, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=28.8, Blast_Score=100, Evalue=6e-22,
Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=29.8387096774194, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=32.7935222672065, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=29.0322580645161, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=28.4046692607004, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24644337, Length=201, Percent_Identity=28.8557213930348, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=25, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI116007236, Length=246, Percent_Identity=23.5772357723577, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17737361, Length=264, Percent_Identity=23.4848484848485, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=29.1005291005291, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27415; Mature: 27415

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSSIALIIGGSSGIGLATAKQLVAQGIKTVILGRNEAKLKAAKAELETIANSDAVETI
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCHHHHHH
QANLYDQSDVDAVNNKINNEERHIKYLVNAAGYFNPKPFIEHTVDDYDTYSVVNRAMFFI
HHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHH
SQSVTRNMIDNGGGAVVNVGSMWAKQAIKATPSSAYSMAKAGLHALTQHMAMELAEYNIR
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEE
VNAVSPAVVKTPIYEAFIDPAEMDDALAGFNDFHPIGRIGSPDDIANSIMFLLNSGSSWV
EEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
TGAIWDVDGGVMAGRN
EEEEEECCCCEECCCC
>Mature Secondary Structure
MKNSSIALIIGGSSGIGLATAKQLVAQGIKTVILGRNEAKLKAAKAELETIANSDAVETI
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHCCCHHHHHH
QANLYDQSDVDAVNNKINNEERHIKYLVNAAGYFNPKPFIEHTVDDYDTYSVVNRAMFFI
HHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHH
SQSVTRNMIDNGGGAVVNVGSMWAKQAIKATPSSAYSMAKAGLHALTQHMAMELAEYNIR
HHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEE
VNAVSPAVVKTPIYEAFIDPAEMDDALAGFNDFHPIGRIGSPDDIANSIMFLLNSGSSWV
EEEECCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
TGAIWDVDGGVMAGRN
EEEEEECCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]