Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is ampE

Identifier: 110833482

GI number: 110833482

Start: 683505

End: 684353

Strand: Direct

Name: ampE

Synonym: ABO_0621

Alternate gene names: NA

Gene position: 683505-684353 (Clockwise)

Preceding gene: 110833481

Following gene: 110833483

Centisome position: 21.91

GC content: 55.48

Gene sequence:

>849_bases
ATGAAGTTTATCGTTCTTATTGTGGTTATGGGGTTGCGACGGATGGACCTTGGTTGGTCTACATTGCTGGCAGATGATGA
ACGGCATCAGCGTTGGTTGCAGCGATGCGGCAGCCGCATTGGCCAGCCGGCTCGTGTTTGGTGGGTTGCGGTGCTGTTGC
CTGCTGTGCTGATTGCTTGGGCTGCATGCTGGTTATCAGGTTTCTGGGGCCAGCTGCTCGTCTTGGGGCTGGGCATCCTG
TTGTTGCTTTGGTTGCTTGGCAGTTACAGTGAATTTCGTTATGTGGATGAGCTACTGGTGCGCGGTCGCATGAATGATCC
AGATGGCTTTTCGGCCTTGGCTACTGACGAATTTTCCGTGACTGGGGTGCCCGGTGATCCGGCCTACCACCAGCAATTGA
ATGAGCAGATCTTGGCGCGTGAGGAGCGGCTGTTCGTGGCGATTTTCTGGCTGGTTTTGTTAGGCTTTGGTGCCGCGTTC
TTGGTGGTGATGAATCATGCCTGGTTACAACATAAGAGACGACATGGCAGAGAAGAAGATGCTCCAGTCTGGCAACAGAC
ACTGGATAACTGGTTGAGCCTTCCACCCCGGCAGTTGCTAATCCTCAGCATGGCCCTGGCGGGTAACTTCAGTGCGGCGA
TGAACCGTATGCGTGGTAGTTGGTGGCAGTTGCCTCCGTCTGCTTCGCTGCTTCTGTCTGTGGCTCATGTGGCGCAGGAA
GAAAGCTCTGAGGCCTGCCCCGCCACGCTGAACATTGCGTTGGATCAGCTGGAAGCGCTGCACGGTTTGCTGCTGCGCTG
TGTCGCCATCTGGCTGATTGTGGCCGCTCTGTGGATTATGCTGCTATGA

Upstream 100 bases:

>100_bases
GCCATGAGCACATTGCGCCGGGAAGAAAAACGGATCCGGGCCCTGCCTTCGACTGGTTGCGTTATCGTCAGGAATTAGCC
AATTTTAAGGAGAAAAGAGC

Downstream 100 bases:

>100_bases
GAATGGCAAGCAGGACCCTGTTTCTCAAGAGCCCCTATGGGAAGGGAAAAAGGGTCCAAAATAACCGACATTGGTCGAAT
TTACGTTTGCTGGCGCCGGG

Product: inner membrane protein AmpE

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAWAACWLSGFWGQLLVLGLGIL
LLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSVTGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAF
LVVMNHAWLQHKRRHGREEDAPVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE
ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL

Sequences:

>Translated_282_residues
MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAWAACWLSGFWGQLLVLGLGIL
LLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSVTGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAF
LVVMNHAWLQHKRRHGREEDAPVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE
ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL
>Mature_282_residues
MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAWAACWLSGFWGQLLVLGLGIL
LLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSVTGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAF
LVVMNHAWLQHKRRHGREEDAPVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE
ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31894; Mature: 31894

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAW
CHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AACWLSGFWGQLLVLGLGILLLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEE
TGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAFLVVMNHAWLQHKRRHGREED
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
APVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE
CCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKFIVLIVVMGLRRMDLGWSTLLADDERHQRWLQRCGSRIGQPARVWWVAVLLPAVLIAW
CHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AACWLSGFWGQLLVLGLGILLLLWLLGSYSEFRYVDELLVRGRMNDPDGFSALATDEFSV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEE
TGVPGDPAYHQQLNEQILAREERLFVAIFWLVLLGFGAAFLVVMNHAWLQHKRRHGREED
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
APVWQQTLDNWLSLPPRQLLILSMALAGNFSAAMNRMRGSWWQLPPSASLLLSVAHVAQE
CCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
ESSEACPATLNIALDQLEALHGLLLRCVAIWLIVAALWIMLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA