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The map label for this gene is petC [H]

Identifier: 110833441

GI number: 110833441

Start: 638181

End: 638837

Strand: Direct

Name: petC [H]

Synonym: ABO_0580

Alternate gene names: 110833441

Gene position: 638181-638837 (Clockwise)

Preceding gene: 110833440

Following gene: 110833442

Centisome position: 20.45

GC content: 52.51

Gene sequence:

>657_bases
ATGAAGAAACTAGCGGTTATTCTTTTCAGCTGCCTGCCGTTGGTCGCGTTCGCGGCTGGCGGTGGCCACAACGAGTACGT
GGTTAAAGCGCCGGTAAACCTGCAAGATAAGGTTGGCCTGCAAAATGGTGCTAAGTTGTTCGTTAACTACTGCATGGGTT
GTCATACTCTCCAGTACCAGCGTTACAGCCGCATGGCGGAAGATCTGGAAATGCCAGAAGAGCTGGTGATGGAGAATCTG
AACTTTGTCAGCGACAAGTTCGGTGACCAGATGCATAACGCCATGGACCAGGACGATGCGAAGAAGTGGTTTGGTAATGC
TCCGCCGGATCTCACCATGGTGACCCGGTACCGCTCTTCGGATTGGGTGTATTCATACCTGATCAACTTCTACGAAGATG
AGTCTCGTCCATTTGGTTACAATAACCATGTCTTCCCGAGTGTGGGCATGCCCCACGTGATGGCGGGCTTGGAGGACGAG
CTGGGCGAAGATGAGTTCAAGCAGGCGATGGGTGACATCACTAACTTCCTGACCTACACCGCGGAGCCGGTTCGTCCGCA
GCGTGAACGTCTTGGGGTTTATGTGCTGCTGTTCTTGGGCATCCTGTTGATCCCGGCTTACCTGCTTAAAAAGGAATACT
GGAAAGACGTACACTGA

Upstream 100 bases:

>100_bases
GCACGATCTATTATTTCAGCTACTTTTTACTAATCATGCCGTTTGTGCATAAATTCGAGAAATCCAAGCCGGTTCCGGAA
CGGGTAACGGGGGGACACTG

Downstream 100 bases:

>100_bases
TACCTCAGTGTTGGCTTCCAGCGTTGAACAGGGTATCCGTGTAAGCGGTTACCCTGTTTCTGTTATAGATCACTAGTGCG
GAGATGATTCGACAATGGGT

Product: ubiquinol-cytochrome c reductase cytochrome c1 subunit

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKKLAVILFSCLPLVAFAAGGGHNEYVVKAPVNLQDKVGLQNGAKLFVNYCMGCHTLQYQRYSRMAEDLEMPEELVMENL
NFVSDKFGDQMHNAMDQDDAKKWFGNAPPDLTMVTRYRSSDWVYSYLINFYEDESRPFGYNNHVFPSVGMPHVMAGLEDE
LGEDEFKQAMGDITNFLTYTAEPVRPQRERLGVYVLLFLGILLIPAYLLKKEYWKDVH

Sequences:

>Translated_218_residues
MKKLAVILFSCLPLVAFAAGGGHNEYVVKAPVNLQDKVGLQNGAKLFVNYCMGCHTLQYQRYSRMAEDLEMPEELVMENL
NFVSDKFGDQMHNAMDQDDAKKWFGNAPPDLTMVTRYRSSDWVYSYLINFYEDESRPFGYNNHVFPSVGMPHVMAGLEDE
LGEDEFKQAMGDITNFLTYTAEPVRPQRERLGVYVLLFLGILLIPAYLLKKEYWKDVH
>Mature_218_residues
MKKLAVILFSCLPLVAFAAGGGHNEYVVKAPVNLQDKVGLQNGAKLFVNYCMGCHTLQYQRYSRMAEDLEMPEELVMENL
NFVSDKFGDQMHNAMDQDDAKKWFGNAPPDLTMVTRYRSSDWVYSYLINFYEDESRPFGYNNHVFPSVGMPHVMAGLEDE
LGEDEFKQAMGDITNFLTYTAEPVRPQRERLGVYVLLFLGILLIPAYLLKKEYWKDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 25058; Mature: 25058

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLAVILFSCLPLVAFAAGGGHNEYVVKAPVNLQDKVGLQNGAKLFVNYCMGCHTLQYQ
CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH
RYSRMAEDLEMPEELVMENLNFVSDKFGDQMHNAMDQDDAKKWFGNAPPDLTMVTRYRSS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHCCC
DWVYSYLINFYEDESRPFGYNNHVFPSVGMPHVMAGLEDELGEDEFKQAMGDITNFLTYT
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHC
AEPVRPQRERLGVYVLLFLGILLIPAYLLKKEYWKDVH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLAVILFSCLPLVAFAAGGGHNEYVVKAPVNLQDKVGLQNGAKLFVNYCMGCHTLQYQ
CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHHH
RYSRMAEDLEMPEELVMENLNFVSDKFGDQMHNAMDQDDAKKWFGNAPPDLTMVTRYRSS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHCCC
DWVYSYLINFYEDESRPFGYNNHVFPSVGMPHVMAGLEDELGEDEFKQAMGDITNFLTYT
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHC
AEPVRPQRERLGVYVLLFLGILLIPAYLLKKEYWKDVH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA