Click here to switch to the map view.

The map label for this gene is sspA [H]

Identifier: 110833442

GI number: 110833442

Start: 638932

End: 639570

Strand: Direct

Name: sspA [H]

Synonym: ABO_0581

Alternate gene names: 110833442

Gene position: 638932-639570 (Clockwise)

Preceding gene: 110833441

Following gene: 110833443

Centisome position: 20.48

GC content: 53.83

Gene sequence:

>639_bases
ATGGGTGTGGTGACCAAGCGTTCTTCAATGACTTTCTTTTCTTCCCCGGAAGATCATTACAGCCACCGCGTGCGTATCGT
GCTGGCAGAAAAAGGGGTCACGGTCGATATCGTTGATGTGGACAGCAACAACAAGCCGGAAGATCTGGCTTCGCTGAACC
CCTACAACGAAGTGCCCACGTTAGTTGATCGTGAGCTGACTCTGTTTCAGTCCACGGTGATCATGGAGTATTTGGACGAG
CGTTTCCCTCATCCTCCGTTGTTGCCAGTTTACCCGGTGGCACGGGCACAAAGTCGCCTGCTGATTCACCGGGTAGAGCG
TGATTGGTGCGGTCATGTGGATGCGATTCTCGCCGGTGAAGAGAAAGAAACCAGCCTCAATAAGCGTCGCAAAGAGCTGC
GTGAAGCGATCATTGCTACCGCACCGATTTTCAGCGAACTGCCATATTTCATGAGTGAAGAGTTTACGTTGGTAGATTGT
GTGGTCGCCCCGATTCTGTGGCGGTTGCCAGCTTTGGGTATTGAGCTGCCTGCCAAGCAGGTGAAGCCGCTGCTGGATTA
TGCCGAGCGTTTGTTCGACCGTGATGCGTTCCAGGCTAGCCTGACAGACGCCGAACGCGAACTGCGTAACCCGCTGTAG

Upstream 100 bases:

>100_bases
CACTGATACCTCAGTGTTGGCTTCCAGCGTTGAACAGGGTATCCGTGTAAGCGGTTACCCTGTTTCTGTTATAGATCACT
AGTGCGGAGATGATTCGACA

Downstream 100 bases:

>100_bases
TTATGTCTGAAATGACGTCCAATCGCCCGTATCTGATACGGGCCATCCACGAGTGGATCTGCGACAATGGCTTGACCACC
CATTTGGCAGTGAATGCCGG

Product: stringent starvation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGVVTKRSSMTFFSSPEDHYSHRVRIVLAEKGVTVDIVDVDSNNKPEDLASLNPYNEVPTLVDRELTLFQSTVIMEYLDE
RFPHPPLLPVYPVARAQSRLLIHRVERDWCGHVDAILAGEEKETSLNKRRKELREAIIATAPIFSELPYFMSEEFTLVDC
VVAPILWRLPALGIELPAKQVKPLLDYAERLFDRDAFQASLTDAERELRNPL

Sequences:

>Translated_212_residues
MGVVTKRSSMTFFSSPEDHYSHRVRIVLAEKGVTVDIVDVDSNNKPEDLASLNPYNEVPTLVDRELTLFQSTVIMEYLDE
RFPHPPLLPVYPVARAQSRLLIHRVERDWCGHVDAILAGEEKETSLNKRRKELREAIIATAPIFSELPYFMSEEFTLVDC
VVAPILWRLPALGIELPAKQVKPLLDYAERLFDRDAFQASLTDAERELRNPL
>Mature_211_residues
GVVTKRSSMTFFSSPEDHYSHRVRIVLAEKGVTVDIVDVDSNNKPEDLASLNPYNEVPTLVDRELTLFQSTVIMEYLDER
FPHPPLLPVYPVARAQSRLLIHRVERDWCGHVDAILAGEEKETSLNKRRKELREAIIATAPIFSELPYFMSEEFTLVDCV
VAPILWRLPALGIELPAKQVKPLLDYAERLFDRDAFQASLTDAERELRNPL

Specific function: Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme [H]

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789624, Length=207, Percent_Identity=58.9371980676328, Blast_Score=258, Evalue=3e-70,
Organism=Drosophila melanogaster, GI21355779, Length=164, Percent_Identity=29.8780487804878, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24660979, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 24259; Mature: 24128

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVTKRSSMTFFSSPEDHYSHRVRIVLAEKGVTVDIVDVDSNNKPEDLASLNPYNEVPT
CCCCCCCCCCEEECCCCHHCCCEEEEEEECCCCEEEEEECCCCCCCHHHHCCCCCCCCCH
LVDRELTLFQSTVIMEYLDERFPHPPLLPVYPVARAQSRLLIHRVERDWCGHVDAILAGE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
EKETSLNKRRKELREAIIATAPIFSELPYFMSEEFTLVDCVVAPILWRLPALGIELPAKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
VKPLLDYAERLFDRDAFQASLTDAERELRNPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GVVTKRSSMTFFSSPEDHYSHRVRIVLAEKGVTVDIVDVDSNNKPEDLASLNPYNEVPT
CCCCCCCCCEEECCCCHHCCCEEEEEEECCCCEEEEEECCCCCCCHHHHCCCCCCCCCH
LVDRELTLFQSTVIMEYLDERFPHPPLLPVYPVARAQSRLLIHRVERDWCGHVDAILAGE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
EKETSLNKRRKELREAIIATAPIFSELPYFMSEEFTLVDCVVAPILWRLPALGIELPAKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHH
VKPLLDYAERLFDRDAFQASLTDAERELRNPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]