Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833425

Identifier: 110833425

GI number: 110833425

Start: 621924

End: 623522

Strand: Direct

Name: 110833425

Synonym: ABO_0564

Alternate gene names: NA

Gene position: 621924-623522 (Clockwise)

Preceding gene: 110833424

Following gene: 110833427

Centisome position: 19.93

GC content: 57.85

Gene sequence:

>1599_bases
ATGAAACGTGTGTTACTGCTTACTTGCGCCCTGATTCCGCTTTCTCTTTTCGCTGCCGACTTTGCGGTCACCGCGCCGGT
GAATAAGGCCGTGTTGTTTCCTGCTCAGGCGCATCTTACTCGCACTTTTAGTCAGGCCTTGCCCGCCGGTGAGCACCAGT
TGGTGGTGAAGGGGTTGCCTGAGTTGGATCTGGATAGTCTGCAAGTGGCGGTTAACGGCGCTGAGTTGCTGGCAATCCGG
CAAGGGTTTGCCGTTGGGGACGTGGATGTATCAGCTCACCGGGCTGAGTTGGAGGCGGCAATTCGCAAGCTGGAGCAGGC
CATGGCCGAAGCCAAGGCAGCCGATGATCTTGATCAACAGCAAATCAATCACCTTCAATCCCTGATGGGCCAGGCACCTC
AAGGACAGGCCGTGTTTGCCCAGGTGCCGGTAGAAAAATGGGCCAGCGCCTGGGAGTCCATTGGCAAAGCGGTGACGCAA
CGGCAAACAGCTATCAACCAGCGGGCGGAGATTCGGCATGGGCAGCAGCAGGAGTTGGATGCCCTTCGTCAGGAGCGTCA
GCTGCTGGGCCAGGGGCAGACTCGTAGCCGCCAGTTGATACTGACCGTGGCGGCTCCTAACAAGTCCACCGCGCAGGTGG
AACTTGCCTATTTTACTGGCCAGGCCGGTTGGCAGAATCAGTTGCGTGTAGATCTGGATAGCGGCAACGAGACCGTAGCG
GTGACCGGCATTGCCCAGATTCACAACCGTACCGGTGAGGACTGGCAGAATGTCAGTGCCACCCTAGGGTTAGTGCCCGC
CGGTTATCGCCCCCTCCCGGATCTGCACCCTTGGCTGGTACGCCTGGCGACACCACAGCCGGCGATGCGTAAGTCATCGT
TGCATTCCGTAATGGCGGAATCTGCGGCCTATGAGACAGATATGGCTCAGCGTATCCAGGCGATGCCCGTGGCAGCGCCT
GTGGCGCACGGTTTTGATATGCGTGTACCGCTTTCAGCGCCGCTCAATCTGGCCAGTGGTGACGCTACCGCGCGGCTTCC
TTATCAGCAGGCGGCGCTGCCGGTAACTTTGACCCGCGAAAGTTACTTATGGCAGCAGCCGGCAGTGTTACTGGTGGGGG
AGTGGCAGAACTCCAGCCCGCTGCCCTGGTTGCCCGGTCACGTTACCCTGTTGCGTGATGGCCAACGCTTGGCCCGTTAT
TACCGCGGCAACAGTATTAAGCAGGGCGAGCACGTGAAGATGAGTTTCGGTGATGATCCGCGCTTGCAGATTGCGGTGGT
GCGCGAACCCTCACAGCAAGGAGAGGTGGGCTTGATCAATAAAGAAAGCACGCTCTCTGCGTTGAAGAATATTACTCTGT
CGTCCCATTACGATAAGGCCGTGACGGTGAATTTGTTGGATCGACTTCCGGTCGCCGGAAACGACAATATTACTATCACA
GCCAAGGGCAAGGCCGCAGATGCCAAGGATGTGAGTGGCGTGAAAGGACTGCAACGATGGCAGTTCACCTTGCCCGCCGG
GGGCGAAGAAAGCCTCAAACAAGGTTTCGAAATTCGCTACCCTGAAGATGCAATTCTGAGCGGTGTAGAGGGCTTGTGA

Upstream 100 bases:

>100_bases
TCAACCCCGGTCGCTTAGGCTGGCAGAGTCTCGCCTGCTTGAACCTTTCCCCTTACCTGCGGTACTAACAGGTATTCGCC
CAACGGTAAGGCTCCTAAAA

Downstream 100 bases:

>100_bases
GGAAAGTTCAACGTTGAAAAATGAAACGGATAAGGGTGTAGAGGCTACGTTTTAAGCCAGCAGACCGCGCCCAACGTTAA
AAAGTTTGAGCGCGGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MKRVLLLTCALIPLSLFAADFAVTAPVNKAVLFPAQAHLTRTFSQALPAGEHQLVVKGLPELDLDSLQVAVNGAELLAIR
QGFAVGDVDVSAHRAELEAAIRKLEQAMAEAKAADDLDQQQINHLQSLMGQAPQGQAVFAQVPVEKWASAWESIGKAVTQ
RQTAINQRAEIRHGQQQELDALRQERQLLGQGQTRSRQLILTVAAPNKSTAQVELAYFTGQAGWQNQLRVDLDSGNETVA
VTGIAQIHNRTGEDWQNVSATLGLVPAGYRPLPDLHPWLVRLATPQPAMRKSSLHSVMAESAAYETDMAQRIQAMPVAAP
VAHGFDMRVPLSAPLNLASGDATARLPYQQAALPVTLTRESYLWQQPAVLLVGEWQNSSPLPWLPGHVTLLRDGQRLARY
YRGNSIKQGEHVKMSFGDDPRLQIAVVREPSQQGEVGLINKESTLSALKNITLSSHYDKAVTVNLLDRLPVAGNDNITIT
AKGKAADAKDVSGVKGLQRWQFTLPAGGEESLKQGFEIRYPEDAILSGVEGL

Sequences:

>Translated_532_residues
MKRVLLLTCALIPLSLFAADFAVTAPVNKAVLFPAQAHLTRTFSQALPAGEHQLVVKGLPELDLDSLQVAVNGAELLAIR
QGFAVGDVDVSAHRAELEAAIRKLEQAMAEAKAADDLDQQQINHLQSLMGQAPQGQAVFAQVPVEKWASAWESIGKAVTQ
RQTAINQRAEIRHGQQQELDALRQERQLLGQGQTRSRQLILTVAAPNKSTAQVELAYFTGQAGWQNQLRVDLDSGNETVA
VTGIAQIHNRTGEDWQNVSATLGLVPAGYRPLPDLHPWLVRLATPQPAMRKSSLHSVMAESAAYETDMAQRIQAMPVAAP
VAHGFDMRVPLSAPLNLASGDATARLPYQQAALPVTLTRESYLWQQPAVLLVGEWQNSSPLPWLPGHVTLLRDGQRLARY
YRGNSIKQGEHVKMSFGDDPRLQIAVVREPSQQGEVGLINKESTLSALKNITLSSHYDKAVTVNLLDRLPVAGNDNITIT
AKGKAADAKDVSGVKGLQRWQFTLPAGGEESLKQGFEIRYPEDAILSGVEGL
>Mature_532_residues
MKRVLLLTCALIPLSLFAADFAVTAPVNKAVLFPAQAHLTRTFSQALPAGEHQLVVKGLPELDLDSLQVAVNGAELLAIR
QGFAVGDVDVSAHRAELEAAIRKLEQAMAEAKAADDLDQQQINHLQSLMGQAPQGQAVFAQVPVEKWASAWESIGKAVTQ
RQTAINQRAEIRHGQQQELDALRQERQLLGQGQTRSRQLILTVAAPNKSTAQVELAYFTGQAGWQNQLRVDLDSGNETVA
VTGIAQIHNRTGEDWQNVSATLGLVPAGYRPLPDLHPWLVRLATPQPAMRKSSLHSVMAESAAYETDMAQRIQAMPVAAP
VAHGFDMRVPLSAPLNLASGDATARLPYQQAALPVTLTRESYLWQQPAVLLVGEWQNSSPLPWLPGHVTLLRDGQRLARY
YRGNSIKQGEHVKMSFGDDPRLQIAVVREPSQQGEVGLINKESTLSALKNITLSSHYDKAVTVNLLDRLPVAGNDNITIT
AKGKAADAKDVSGVKGLQRWQFTLPAGGEESLKQGFEIRYPEDAILSGVEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57816; Mature: 57816

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLLLTCALIPLSLFAADFAVTAPVNKAVLFPAQAHLTRTFSQALPAGEHQLVVKGLP
CCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEECCC
ELDLDSLQVAVNGAELLAIRQGFAVGDVDVSAHRAELEAAIRKLEQAMAEAKAADDLDQQ
CCCCCCEEEEECCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
QINHLQSLMGQAPQGQAVFAQVPVEKWASAWESIGKAVTQRQTAINQRAEIRHGQQQELD
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALRQERQLLGQGQTRSRQLILTVAAPNKSTAQVELAYFTGQAGWQNQLRVDLDSGNETVA
HHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEE
VTGIAQIHNRTGEDWQNVSATLGLVPAGYRPLPDLHPWLVRLATPQPAMRKSSLHSVMAE
EEEHHHHHCCCCCCHHCCHHEEEECCCCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHH
SAAYETDMAQRIQAMPVAAPVAHGFDMRVPLSAPLNLASGDATARLPYQQAALPVTLTRE
HHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCCCCCCCCEEECCHHHCCCEEEECCC
SYLWQQPAVLLVGEWQNSSPLPWLPGHVTLLRDGQRLARYYRGNSIKQGEHVKMSFGDDP
HHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCEEEEECCCCC
RLQIAVVREPSQQGEVGLINKESTLSALKNITLSSHYDKAVTVNLLDRLPVAGNDNITIT
CEEEEEEECCCCCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCEEEE
AKGKAADAKDVSGVKGLQRWQFTLPAGGEESLKQGFEIRYPEDAILSGVEGL
ECCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHCCCEEECCCHHHHCCCCCC
>Mature Secondary Structure
MKRVLLLTCALIPLSLFAADFAVTAPVNKAVLFPAQAHLTRTFSQALPAGEHQLVVKGLP
CCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECHHHHHHHHHHHHCCCCCCEEEEECCC
ELDLDSLQVAVNGAELLAIRQGFAVGDVDVSAHRAELEAAIRKLEQAMAEAKAADDLDQQ
CCCCCCEEEEECCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
QINHLQSLMGQAPQGQAVFAQVPVEKWASAWESIGKAVTQRQTAINQRAEIRHGQQQELD
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALRQERQLLGQGQTRSRQLILTVAAPNKSTAQVELAYFTGQAGWQNQLRVDLDSGNETVA
HHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEE
VTGIAQIHNRTGEDWQNVSATLGLVPAGYRPLPDLHPWLVRLATPQPAMRKSSLHSVMAE
EEEHHHHHCCCCCCHHCCHHEEEECCCCCCCCCCCCHHHEEECCCCHHHHHHHHHHHHHH
SAAYETDMAQRIQAMPVAAPVAHGFDMRVPLSAPLNLASGDATARLPYQQAALPVTLTRE
HHHHHHHHHHHHHHCCCHHHHHCCCCEEECCCCCCCCCCCCCEEECCHHHCCCEEEECCC
SYLWQQPAVLLVGEWQNSSPLPWLPGHVTLLRDGQRLARYYRGNSIKQGEHVKMSFGDDP
HHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCEEEEECCCCC
RLQIAVVREPSQQGEVGLINKESTLSALKNITLSSHYDKAVTVNLLDRLPVAGNDNITIT
CEEEEEEECCCCCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCCEEEE
AKGKAADAKDVSGVKGLQRWQFTLPAGGEESLKQGFEIRYPEDAILSGVEGL
ECCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHCCCEEECCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA