| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ttg2D [H]
Identifier: 110833419
GI number: 110833419
Start: 615988
End: 616635
Strand: Direct
Name: ttg2D [H]
Synonym: ABO_0558
Alternate gene names: 110833419
Gene position: 615988-616635 (Clockwise)
Preceding gene: 110833401
Following gene: 110833420
Centisome position: 19.74
GC content: 52.93
Gene sequence:
>648_bases ATGCATTTACAATGGTATATGGCCGCCTGGCTTCGCGTCGGGTTGGTGGTCATGCTGACCGCAATGGCAGCACTGGTCCA GGCCCAGAGTGATCCTCGCCAGGTGGTGGCGGATGCAGTGGAGCGCATGACGTCTCGTGTTGAGGCGGAGCGAGAGACGT TGAAAGCCGATCCGGATAGGGCCAAAGAGCTGGTGCGTGAAGAGCTGGCGGATCTGGTGGATTTCAAGCGCATCACCCGC ATGGTCATGGGCGATTACTTTGGGCCGTCTAGCAAGGAGCAGAAATACCGGTTTTTGGATGTCTTCAAAAACAGCTTAAT CAACACCTATGCGTCCGGCATTACCCTGTATGACGGACAGAAAATCGACATCTTGCCAATGCAGGATGGCGATCGTAAAG GCGATTACGCCCGAGTGCGCATGGAAGTGAAGACTAACTCCGGCCAGGTGGTGCCCATCTACTACACCCTATTCTTGCGT GATGATCAGTGGAGGGTAATCAATGTGTACGTGAATGGTCTGGATCTGCGAGACACTTTCAAAAGCCAGTTCGCCCAAGG CATGCAACAGTACAATGATATCGACAAAGTGGTCGATAACTGGTCTGCGGATGCCAAAATTGATGCGGGCCTAAAAGAAG AAGGCTAG
Upstream 100 bases:
>100_bases CCAATAAAAGCACTGAGGTTCAGTGTGTTGCGGTTGTTGATCACTGGACAGCAGGTAAAGAACACCGTAAAACCGCCGAA GACTAAATAGGGAGTAATCT
Downstream 100 bases:
>100_bases CAGGGTAAATAATCTTGCTGCGCTGGGGCCGTGGATGGTGTTGGGGACGGTGCCGCCGTGGTAAGGGGCAACGCGCTCGC GTATTATTGCGCCCTTGATA
Product: toluene-tolerance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MHLQWYMAAWLRVGLVVMLTAMAALVQAQSDPRQVVADAVERMTSRVEAERETLKADPDRAKELVREELADLVDFKRITR MVMGDYFGPSSKEQKYRFLDVFKNSLINTYASGITLYDGQKIDILPMQDGDRKGDYARVRMEVKTNSGQVVPIYYTLFLR DDQWRVINVYVNGLDLRDTFKSQFAQGMQQYNDIDKVVDNWSADAKIDAGLKEEG
Sequences:
>Translated_215_residues MHLQWYMAAWLRVGLVVMLTAMAALVQAQSDPRQVVADAVERMTSRVEAERETLKADPDRAKELVREELADLVDFKRITR MVMGDYFGPSSKEQKYRFLDVFKNSLINTYASGITLYDGQKIDILPMQDGDRKGDYARVRMEVKTNSGQVVPIYYTLFLR DDQWRVINVYVNGLDLRDTFKSQFAQGMQQYNDIDKVVDNWSADAKIDAGLKEEG >Mature_215_residues MHLQWYMAAWLRVGLVVMLTAMAALVQAQSDPRQVVADAVERMTSRVEAERETLKADPDRAKELVREELADLVDFKRITR MVMGDYFGPSSKEQKYRFLDVFKNSLINTYASGITLYDGQKIDILPMQDGDRKGDYARVRMEVKTNSGQVVPIYYTLFLR DDQWRVINVYVNGLDLRDTFKSQFAQGMQQYNDIDKVVDNWSADAKIDAGLKEEG
Specific function: Plays a role in toluene resistance [H]
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=123, Percent_Identity=26.8292682926829, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 24737; Mature: 24737
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLQWYMAAWLRVGLVVMLTAMAALVQAQSDPRQVVADAVERMTSRVEAERETLKADPDR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AKELVREELADLVDFKRITRMVMGDYFGPSSKEQKYRFLDVFKNSLINTYASGITLYDGQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCC KIDILPMQDGDRKGDYARVRMEVKTNSGQVVPIYYTLFLRDDQWRVINVYVNGLDLRDTF EEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCEEEEEEEEECCCHHHHH KSQFAQGMQQYNDIDKVVDNWSADAKIDAGLKEEG HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC >Mature Secondary Structure MHLQWYMAAWLRVGLVVMLTAMAALVQAQSDPRQVVADAVERMTSRVEAERETLKADPDR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH AKELVREELADLVDFKRITRMVMGDYFGPSSKEQKYRFLDVFKNSLINTYASGITLYDGQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCC KIDILPMQDGDRKGDYARVRMEVKTNSGQVVPIYYTLFLRDDQWRVINVYVNGLDLRDTF EEEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEEEEEECCCEEEEEEEEECCCHHHHH KSQFAQGMQQYNDIDKVVDNWSADAKIDAGLKEEG HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9658016 [H]