| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is mviN [H]
Identifier: 110833318
GI number: 110833318
Start: 496206
End: 497771
Strand: Direct
Name: mviN [H]
Synonym: ABO_0457
Alternate gene names: 110833318
Gene position: 496206-497771 (Clockwise)
Preceding gene: 110833316
Following gene: 110833319
Centisome position: 15.9
GC content: 56.58
Gene sequence:
>1566_bases ATGACCGATATCCCCGAACAACCCCCGAAAAAGGCAGGTTTGCTGGCCTCCACCGCCGTGGTGGCGACCATGACTATGCT GTCGCGGGTGCTGGGGTTGGTGCGTGATGTGGTTATCGCCAGAATGCTTGGCGCCTCCGCCGGTGCGGATGCTTTTTTTG TGGCATTGAAAATTCCTAATTTTCTGCGTCGATTGTTTGCCGAAGGGGCCTTTAATCAGGCCTTTGTGCCTGTGCTTAGT GAATATCGCAGCAAGGGTAGTATGGCGGCGACCAAGTTGCTGGTAGATCGAGTGGCGGGCACGTTAGGCGGCACTTTGAT GTTAGTAACCCTGGTCGGGGTGCTGGCGGCACCGGGAATTATTTGGATATTCGCCCCGGGTTTTGGGGATGATCCGGCAA AACGGGCGCTGACGGTTGAGATGTTGCGCCTCACCTTTCCTTACCTGTTCTTCATTGCGCTTACCGCCTTTGCCGGTGGC ATTCTCAATAGCTGGAACCGTTTTGCGGTGCCGGCGTTTACGCCGGTGTTGCTCAATCTGAGCCTGATCGGTTGTGCCCT GTTTCTGGCGCCACATTTTGCCGAGGAGCGCATGGCGGTGGCGCTGGCTTGGGGAGTGTTGATTGCCGGGATAGCCCAGC TTTTGTTCCAATTGCCATTTTTGGCTCGGCTGAACCTAATGCCGATCCCGCGCATGGGCTGGAGTGACCCCGGTGTCCGT AAGATCATGAGGCTGATGGCGCCGGCCCTGTTCGGGGCATCGGTTTATCAGCTTAATTCTTTGGTCAATACGATTCTGGC CTCTATGTTGGAAACGGGATCGGTGACCTGGCTGTACTACACGGATCGCTTGATTGAATTGCCTTTAGGGATTTTTGCGG TGGCCATTGGTACGGTAATTCTGCCCAGCTTATCCAGTAAACATGCGGATGCCTCTGCTGAGGCGTTCTCGAGGACCTTG GACTGGGCCATTCGGATGGTGTTGCTGGTTGGCTTGCCTGCGGCTTTGGCGTTGTTTGCTTTGGCCGAGCCATTGTTATC TACCCTGTTTCAATACGGTGAGTTTTCGGCGTTTGATGTGACGAAAACCGCCGCATCGCTTCGTGCGTATAGCGCGGGTT TGCTCGCCGCCATGTTGATCAAGGTTTTGGCGCCAGGGTTCTATGCGCGCCAAGATACACGCACCCCGGTGCGCATCGGG GTGTTGGCCATGCTGGCTAACATGCTGTTGGGCGCCTTGTTGGTGTGGGAGTGGCGTCATGTTGGCTTGGCCTCGGCCAT GGCGTTATCGGCTTGGCTGAATGCTGGTTTGTTATATTTGGGCCTGCGCCGTAGTGGGGTGTACCAGCCGTTGTCAGGTT GGGGGTTGCAATGGTTGCGGATGTTGTTGGCCGGGGCGTCCATGGTGGCGGCTTGTTACTGGCTGTCACTGCAGACCACA GCCTGGAATGAGCCCGGAGTGTGGCCTCGAGTCGGCTGGCTGTCATTGATAGTGGCTGCGGGCGTGGCCATTTATTTGTC GTCACTGGTGGTGTTAGGTTTGCGGGTGCGGCACTTGCGCCGTTAG
Upstream 100 bases:
>100_bases TGTGTCAATGGTGAATGCCTGTTGAAATGATGATTGGCACGTGGCTCTCTGGCGGTTTGGGTGGCCTTTCGTTAACCTTC ACCGGTTTCTTGGAGCGACA
Downstream 100 bases:
>100_bases TGATTTCGCATTGTGGCGCTCGGGCGTGTGTCGTGGGCCTGCCCAACTCTGTATAATCGGGCGTCTTTTGATATGAGGGT GAGATGCGACTGATTCGCGG
Product: MviN family membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MTDIPEQPPKKAGLLASTAVVATMTMLSRVLGLVRDVVIARMLGASAGADAFFVALKIPNFLRRLFAEGAFNQAFVPVLS EYRSKGSMAATKLLVDRVAGTLGGTLMLVTLVGVLAAPGIIWIFAPGFGDDPAKRALTVEMLRLTFPYLFFIALTAFAGG ILNSWNRFAVPAFTPVLLNLSLIGCALFLAPHFAEERMAVALAWGVLIAGIAQLLFQLPFLARLNLMPIPRMGWSDPGVR KIMRLMAPALFGASVYQLNSLVNTILASMLETGSVTWLYYTDRLIELPLGIFAVAIGTVILPSLSSKHADASAEAFSRTL DWAIRMVLLVGLPAALALFALAEPLLSTLFQYGEFSAFDVTKTAASLRAYSAGLLAAMLIKVLAPGFYARQDTRTPVRIG VLAMLANMLLGALLVWEWRHVGLASAMALSAWLNAGLLYLGLRRSGVYQPLSGWGLQWLRMLLAGASMVAACYWLSLQTT AWNEPGVWPRVGWLSLIVAAGVAIYLSSLVVLGLRVRHLRR
Sequences:
>Translated_521_residues MTDIPEQPPKKAGLLASTAVVATMTMLSRVLGLVRDVVIARMLGASAGADAFFVALKIPNFLRRLFAEGAFNQAFVPVLS EYRSKGSMAATKLLVDRVAGTLGGTLMLVTLVGVLAAPGIIWIFAPGFGDDPAKRALTVEMLRLTFPYLFFIALTAFAGG ILNSWNRFAVPAFTPVLLNLSLIGCALFLAPHFAEERMAVALAWGVLIAGIAQLLFQLPFLARLNLMPIPRMGWSDPGVR KIMRLMAPALFGASVYQLNSLVNTILASMLETGSVTWLYYTDRLIELPLGIFAVAIGTVILPSLSSKHADASAEAFSRTL DWAIRMVLLVGLPAALALFALAEPLLSTLFQYGEFSAFDVTKTAASLRAYSAGLLAAMLIKVLAPGFYARQDTRTPVRIG VLAMLANMLLGALLVWEWRHVGLASAMALSAWLNAGLLYLGLRRSGVYQPLSGWGLQWLRMLLAGASMVAACYWLSLQTT AWNEPGVWPRVGWLSLIVAAGVAIYLSSLVVLGLRVRHLRR >Mature_520_residues TDIPEQPPKKAGLLASTAVVATMTMLSRVLGLVRDVVIARMLGASAGADAFFVALKIPNFLRRLFAEGAFNQAFVPVLSE YRSKGSMAATKLLVDRVAGTLGGTLMLVTLVGVLAAPGIIWIFAPGFGDDPAKRALTVEMLRLTFPYLFFIALTAFAGGI LNSWNRFAVPAFTPVLLNLSLIGCALFLAPHFAEERMAVALAWGVLIAGIAQLLFQLPFLARLNLMPIPRMGWSDPGVRK IMRLMAPALFGASVYQLNSLVNTILASMLETGSVTWLYYTDRLIELPLGIFAVAIGTVILPSLSSKHADASAEAFSRTLD WAIRMVLLVGLPAALALFALAEPLLSTLFQYGEFSAFDVTKTAASLRAYSAGLLAAMLIKVLAPGFYARQDTRTPVRIGV LAMLANMLLGALLVWEWRHVGLASAMALSAWLNAGLLYLGLRRSGVYQPLSGWGLQWLRMLLAGASMVAACYWLSLQTTA WNEPGVWPRVGWLSLIVAAGVAIYLSSLVVLGLRVRHLRR
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=510, Percent_Identity=45.8823529411765, Blast_Score=454, Evalue=1e-129,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56252; Mature: 56121
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIPEQPPKKAGLLASTAVVATMTMLSRVLGLVRDVVIARMLGASAGADAFFVALKIPN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH FLRRLFAEGAFNQAFVPVLSEYRSKGSMAATKLLVDRVAGTLGGTLMLVTLVGVLAAPGI HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IWIFAPGFGDDPAKRALTVEMLRLTFPYLFFIALTAFAGGILNSWNRFAVPAFTPVLLNL EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH SLIGCALFLAPHFAEERMAVALAWGVLIAGIAQLLFQLPFLARLNLMPIPRMGWSDPGVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCHHHH KIMRLMAPALFGASVYQLNSLVNTILASMLETGSVTWLYYTDRLIELPLGIFAVAIGTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHH LPSLSSKHADASAEAFSRTLDWAIRMVLLVGLPAALALFALAEPLLSTLFQYGEFSAFDV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH TKTAASLRAYSAGLLAAMLIKVLAPGFYARQDTRTPVRIGVLAMLANMLLGALLVWEWRH HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGLASAMALSAWLNAGLLYLGLRRSGVYQPLSGWGLQWLRMLLAGASMVAACYWLSLQTT HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AWNEPGVWPRVGWLSLIVAAGVAIYLSSLVVLGLRVRHLRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDIPEQPPKKAGLLASTAVVATMTMLSRVLGLVRDVVIARMLGASAGADAFFVALKIPN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHH FLRRLFAEGAFNQAFVPVLSEYRSKGSMAATKLLVDRVAGTLGGTLMLVTLVGVLAAPGI HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IWIFAPGFGDDPAKRALTVEMLRLTFPYLFFIALTAFAGGILNSWNRFAVPAFTPVLLNL EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH SLIGCALFLAPHFAEERMAVALAWGVLIAGIAQLLFQLPFLARLNLMPIPRMGWSDPGVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCHHHH KIMRLMAPALFGASVYQLNSLVNTILASMLETGSVTWLYYTDRLIELPLGIFAVAIGTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHH LPSLSSKHADASAEAFSRTLDWAIRMVLLVGLPAALALFALAEPLLSTLFQYGEFSAFDV HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH TKTAASLRAYSAGLLAAMLIKVLAPGFYARQDTRTPVRIGVLAMLANMLLGALLVWEWRH HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VGLASAMALSAWLNAGLLYLGLRRSGVYQPLSGWGLQWLRMLLAGASMVAACYWLSLQTT HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AWNEPGVWPRVGWLSLIVAAGVAIYLSSLVVLGLRVRHLRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9457888; 10952301 [H]