| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110833301
Identifier: 110833301
GI number: 110833301
Start: 480283
End: 481212
Strand: Direct
Name: 110833301
Synonym: ABO_0440
Alternate gene names: NA
Gene position: 480283-481212 (Clockwise)
Preceding gene: 110833300
Following gene: 110833302
Centisome position: 15.39
GC content: 53.87
Gene sequence:
>930_bases ATGAAAACCCGTATCGACTCCGTCGAAGATATTATTCGCAGTTTCTCCGAACAGGGATACATTTGTAGCGAGCGTATTGC GTTGGCGGTGTATCTGGCGGCGCAGTTGCACAAGCCGGTACTGGTAGAGGGTCCGCCCGGGGTGGGAAAAACCGAACTGG CTAAAGCCGCGGCGGCGTTTTTGGAAGCACCGCTCATTCGCTTGCAGTGTTATGAGGGGCTGGATGAGAGCCGTGCCTTG TACGAGTGGAAGTATGGCAAGCAGTTGCTGTACACGCAGCTTTTGCGTGACAAGCTGGGCGGTATGCTGGCGGACACTGA CAGCCTGGAAGCCAGTATGGATCGCCTGGGTGACTTGGGCGAAGCTTTTTACAGTGAAACGTTTCTAGAGCCTCGCCCTC TACTGCATGCGTTGCGCAGCGATGAGCCCGCGGTGTTGTTGATTGATGAAATCGACAAGGCTGATCAGGAATTTGAGGCA TTTCTGCTGGAGCTGCTTTCTGATTTCCAAATTTCCATCCCCGAGCTAGGCACAGTGAAGGCGAAGCACCAGCCATTGGT ATTGTTGACCAGTAATGATCAGCGTGAATTGTCTGATGCGTTAAAGCGGCGCTGCTTGCACCTTTATATTCCTTACCCGG AAGCTGAGCTGGAAGCGAACATTGTGGCGGCGCGGGTACCGGATCTGGATGTTAGATTACGTGAGCAGTTGGTAGCGTTT ATTCAGTACCTGCGAGAGCAGGATATGAAGAAGCTGCCGGCGATTTCCGAAACTCTGGACTGGGCGCGAGCGCTGGTCTT GCTGCACGCGGATTCACTGGAGCAGCAGCAGGTTGCGGATACACTTAACCTCGTGTTGAAGACCGAACAGGATGTGACTT TGGCGCGGGAGCTGTTACCGGCTTGGCTGCGTAAGCTGGACAAACGTTAA
Upstream 100 bases:
>100_bases GTGGTTGGTCAATGTCTCCCGCCTCACTCTGGGTTACTCTGTTTGGCTTAGGCAAGGTTCAGCGTCGGCTGTGCCCTGGC AAGGCTGAGTAGGAGTAACC
Downstream 100 bases:
>100_bases TGCCAACCCGTCGCCTTTCTGAATTTGTGCAGGCCCTGCGTGGTGCAGGGTTACGGATTTCGCCGGATGAAGCGACCCAG GCTATGGATGCCGCTGCGTT
Product: AAA family ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; AAA Family ATPase; AAA_5 ATPase; ATPase Central Domain-Containing Protein; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Protein; Aaa ATPase; ATPase Associated With Various Cellular; ATPase-Like Protein; Carbon Monoxide Dehydrogenase Accesory Protein; Chaperone ClpB; ClpA/ClpB Family Protein; Oligopeptide ABC Transporter; ATPase Aaa Family; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; MoxR-Like ATPase CoxD; CoxD-Like Protein; ATP-Dependent Protease Subunit
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKTRIDSVEDIIRSFSEQGYICSERIALAVYLAAQLHKPVLVEGPPGVGKTELAKAAAAFLEAPLIRLQCYEGLDESRAL YEWKYGKQLLYTQLLRDKLGGMLADTDSLEASMDRLGDLGEAFYSETFLEPRPLLHALRSDEPAVLLIDEIDKADQEFEA FLLELLSDFQISIPELGTVKAKHQPLVLLTSNDQRELSDALKRRCLHLYIPYPEAELEANIVAARVPDLDVRLREQLVAF IQYLREQDMKKLPAISETLDWARALVLLHADSLEQQQVADTLNLVLKTEQDVTLARELLPAWLRKLDKR
Sequences:
>Translated_309_residues MKTRIDSVEDIIRSFSEQGYICSERIALAVYLAAQLHKPVLVEGPPGVGKTELAKAAAAFLEAPLIRLQCYEGLDESRAL YEWKYGKQLLYTQLLRDKLGGMLADTDSLEASMDRLGDLGEAFYSETFLEPRPLLHALRSDEPAVLLIDEIDKADQEFEA FLLELLSDFQISIPELGTVKAKHQPLVLLTSNDQRELSDALKRRCLHLYIPYPEAELEANIVAARVPDLDVRLREQLVAF IQYLREQDMKKLPAISETLDWARALVLLHADSLEQQQVADTLNLVLKTEQDVTLARELLPAWLRKLDKR >Mature_309_residues MKTRIDSVEDIIRSFSEQGYICSERIALAVYLAAQLHKPVLVEGPPGVGKTELAKAAAAFLEAPLIRLQCYEGLDESRAL YEWKYGKQLLYTQLLRDKLGGMLADTDSLEASMDRLGDLGEAFYSETFLEPRPLLHALRSDEPAVLLIDEIDKADQEFEA FLLELLSDFQISIPELGTVKAKHQPLVLLTSNDQRELSDALKRRCLHLYIPYPEAELEANIVAARVPDLDVRLREQLVAF IQYLREQDMKKLPAISETLDWARALVLLHADSLEQQQVADTLNLVLKTEQDVTLARELLPAWLRKLDKR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35052; Mature: 35052
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRIDSVEDIIRSFSEQGYICSERIALAVYLAAQLHKPVLVEGPPGVGKTELAKAAAAF CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH LEAPLIRLQCYEGLDESRALYEWKYGKQLLYTQLLRDKLGGMLADTDSLEASMDRLGDLG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHH EAFYSETFLEPRPLLHALRSDEPAVLLIDEIDKADQEFEAFLLELLSDFQISIPELGTVK HHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC AKHQPLVLLTSNDQRELSDALKRRCLHLYIPYPEAELEANIVAARVPDLDVRLREQLVAF CCCCCEEEEECCCHHHHHHHHHHHHEEEECCCCCCHHHHCEEEEECCCCHHHHHHHHHHH IQYLREQDMKKLPAISETLDWARALVLLHADSLEQQQVADTLNLVLKTEQDVTLARELLP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH AWLRKLDKR HHHHHHCCC >Mature Secondary Structure MKTRIDSVEDIIRSFSEQGYICSERIALAVYLAAQLHKPVLVEGPPGVGKTELAKAAAAF CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH LEAPLIRLQCYEGLDESRALYEWKYGKQLLYTQLLRDKLGGMLADTDSLEASMDRLGDLG HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHH EAFYSETFLEPRPLLHALRSDEPAVLLIDEIDKADQEFEAFLLELLSDFQISIPELGTVK HHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC AKHQPLVLLTSNDQRELSDALKRRCLHLYIPYPEAELEANIVAARVPDLDVRLREQLVAF CCCCCEEEEECCCHHHHHHHHHHHHEEEECCCCCCHHHHCEEEEECCCCHHHHHHHHHHH IQYLREQDMKKLPAISETLDWARALVLLHADSLEQQQVADTLNLVLKTEQDVTLARELLP HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH AWLRKLDKR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA