Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833302

Identifier: 110833302

GI number: 110833302

Start: 481212

End: 482573

Strand: Direct

Name: 110833302

Synonym: ABO_0441

Alternate gene names: NA

Gene position: 481212-482573 (Clockwise)

Preceding gene: 110833301

Following gene: 110833304

Centisome position: 15.42

GC content: 55.87

Gene sequence:

>1362_bases
ATGCCAACCCGTCGCCTTTCTGAATTTGTGCAGGCCCTGCGTGGTGCAGGGTTACGGATTTCGCCGGATGAAGCGACCCA
GGCTATGGATGCCGCTGCGTTGGTGGGCTACCAGGGCCGACAACGTTTTCATGATGCCCTGGCGATGACGTTGGTGAAGC
AGGAAGAGGACCGCTCGGCCTTCGAGGAGACCTTTGCGCGTTTTTTTGCGGTGACGTCTGATGTTCGCTCTGGCTTATCA
TCGCAGAGCGCACCGCGTGCCATGCCGGCTGCGGTGAACGAGGCTGGCGAAACGAGCGAGAAGGGTCGGACAGAGGAGGT
ATTTGCTGATCTGACCACCCAAACCCCTGCCCAATTGGATCAACGCCTTGCCGAAGCTGCGGCGCGAATGGATTTCACTC
AGATGGAAGTGATTACCCAGCAAGGACTGTATACCCGTCGATTACTGATGAACATGGGCATGGGGGCTGTGGATGATCGT
ATTCTAGAGCTGGATAAAGGGGGAGATCTTTGTCTGGCTCGGGCGGAAACACTGCGGCAATGGAGGCAGGAGGTTCGTGA
GCAAGCAGCCGACCATGTGCGACGGCAATTTCTTCTGCACGGTGCCGGTAAGGGGCGGGCGCTGCGCGAGCAAACCATGC
GTGCGGTGCCCTTCCGGCACCTGCGCGAATTTCAAGAAGTAAAAACATTGGTGCGACGCATGGCGCGGCGCCTGGCTAGT
CTGCATCAGCGGCGCATGAAAAAAAGTCGACGAGGCATGTTGGACGCGCGACGCACTTTGGTGGCCGGTATTCGTCACGA
TGGCATACCTATGCGATTGCATTGGCGCCAGCGGCCAGTTCAGAAAAGCCGAGTCATGGTGATTTGTGATGTGTCCAGTT
CGGTGAGTGATGCCGCTCGTTTTCTGCTGCAGTTTCTGTACGCAATGAATGATGTGTTACCGCGGGTACGCAGTTTTGCG
TTTGCGTCACGCTTTGATGAAATTACGGAGGATTTTCAGCGCTACAGCCCGGATGTGGCTGTGGGTAGGGTTTTGGATCG
TCTGTCTGGCAGCGGTACGGATTATGCGGAAATGTTTGCGGATTTCTGGCGTCGTTGTGAACGGGAGTTGGATAGTCATA
CCACGGTTATTATTTTGGGTGATGCACGAAATAACTATCTTCCTGAGGGTGCCGAGGTGTTACAGCAAATCCGTCGGCGG
GTGAAACAGGTATGGTGGCTCAACCCCGAGGCTCGTTCTCGCTGGAATAGCGGGGATGCGGTGATGGACCGCTATTTGCC
CCATTGTCGGATGGCTCGCCAATGCGCTTCACTGGATGACCTTGAACGGATTGTGGATTCGCTGCTCAAGGGGCTAAATT
AG

Upstream 100 bases:

>100_bases
AGGTTGCGGATACACTTAACCTCGTGTTGAAGACCGAACAGGATGTGACTTTGGCGCGGGAGCTGTTACCGGCTTGGCTG
CGTAAGCTGGACAAACGTTA

Downstream 100 bases:

>100_bases
CACGCTTTGTGCGCAAGCGTTACCTTTGAGAGTCTGAATGATTCCTGGCTTTTGATGGGCGAGGCCCTGTGCTGCGAAGG
GCCTGCCGCAATGTGGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain-Containing Protein; Vwa Domain Containing Coxe-Like Protein; Vwa Domain Coxe-Like Protein; Vwa Containing Coxe Family Protein; VWA Domain Protein; CoxE-Like Protein; Von Willebrand Factor Type A Domain-Containing Protein

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MPTRRLSEFVQALRGAGLRISPDEATQAMDAAALVGYQGRQRFHDALAMTLVKQEEDRSAFEETFARFFAVTSDVRSGLS
SQSAPRAMPAAVNEAGETSEKGRTEEVFADLTTQTPAQLDQRLAEAAARMDFTQMEVITQQGLYTRRLLMNMGMGAVDDR
ILELDKGGDLCLARAETLRQWRQEVREQAADHVRRQFLLHGAGKGRALREQTMRAVPFRHLREFQEVKTLVRRMARRLAS
LHQRRMKKSRRGMLDARRTLVAGIRHDGIPMRLHWRQRPVQKSRVMVICDVSSSVSDAARFLLQFLYAMNDVLPRVRSFA
FASRFDEITEDFQRYSPDVAVGRVLDRLSGSGTDYAEMFADFWRRCERELDSHTTVIILGDARNNYLPEGAEVLQQIRRR
VKQVWWLNPEARSRWNSGDAVMDRYLPHCRMARQCASLDDLERIVDSLLKGLN

Sequences:

>Translated_453_residues
MPTRRLSEFVQALRGAGLRISPDEATQAMDAAALVGYQGRQRFHDALAMTLVKQEEDRSAFEETFARFFAVTSDVRSGLS
SQSAPRAMPAAVNEAGETSEKGRTEEVFADLTTQTPAQLDQRLAEAAARMDFTQMEVITQQGLYTRRLLMNMGMGAVDDR
ILELDKGGDLCLARAETLRQWRQEVREQAADHVRRQFLLHGAGKGRALREQTMRAVPFRHLREFQEVKTLVRRMARRLAS
LHQRRMKKSRRGMLDARRTLVAGIRHDGIPMRLHWRQRPVQKSRVMVICDVSSSVSDAARFLLQFLYAMNDVLPRVRSFA
FASRFDEITEDFQRYSPDVAVGRVLDRLSGSGTDYAEMFADFWRRCERELDSHTTVIILGDARNNYLPEGAEVLQQIRRR
VKQVWWLNPEARSRWNSGDAVMDRYLPHCRMARQCASLDDLERIVDSLLKGLN
>Mature_452_residues
PTRRLSEFVQALRGAGLRISPDEATQAMDAAALVGYQGRQRFHDALAMTLVKQEEDRSAFEETFARFFAVTSDVRSGLSS
QSAPRAMPAAVNEAGETSEKGRTEEVFADLTTQTPAQLDQRLAEAAARMDFTQMEVITQQGLYTRRLLMNMGMGAVDDRI
LELDKGGDLCLARAETLRQWRQEVREQAADHVRRQFLLHGAGKGRALREQTMRAVPFRHLREFQEVKTLVRRMARRLASL
HQRRMKKSRRGMLDARRTLVAGIRHDGIPMRLHWRQRPVQKSRVMVICDVSSSVSDAARFLLQFLYAMNDVLPRVRSFAF
ASRFDEITEDFQRYSPDVAVGRVLDRLSGSGTDYAEMFADFWRRCERELDSHTTVIILGDARNNYLPEGAEVLQQIRRRV
KQVWWLNPEARSRWNSGDAVMDRYLPHCRMARQCASLDDLERIVDSLLKGLN

Specific function: Unknown

COG id: COG3552

COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51936; Mature: 51805

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTRRLSEFVQALRGAGLRISPDEATQAMDAAALVGYQGRQRFHDALAMTLVKQEEDRSA
CCHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEETFARFFAVTSDVRSGLSSQSAPRAMPAAVNEAGETSEKGRTEEVFADLTTQTPAQLD
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHH
QRLAEAAARMDFTQMEVITQQGLYTRRLLMNMGMGAVDDRILELDKGGDLCLARAETLRQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
WRQEVREQAADHVRRQFLLHGAGKGRALREQTMRAVPFRHLREFQEVKTLVRRMARRLAS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LHQRRMKKSRRGMLDARRTLVAGIRHDGIPMRLHWRQRPVQKSRVMVICDVSSSVSDAAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHCCCCCCCEEEEEECCCCHHHHHH
FLLQFLYAMNDVLPRVRSFAFASRFDEITEDFQRYSPDVAVGRVLDRLSGSGTDYAEMFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHH
DFWRRCERELDSHTTVIILGDARNNYLPEGAEVLQQIRRRVKQVWWLNPEARSRWNSGDA
HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHH
VMDRYLPHCRMARQCASLDDLERIVDSLLKGLN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTRRLSEFVQALRGAGLRISPDEATQAMDAAALVGYQGRQRFHDALAMTLVKQEEDRSA
CHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEETFARFFAVTSDVRSGLSSQSAPRAMPAAVNEAGETSEKGRTEEVFADLTTQTPAQLD
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHH
QRLAEAAARMDFTQMEVITQQGLYTRRLLMNMGMGAVDDRILELDKGGDLCLARAETLRQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHH
WRQEVREQAADHVRRQFLLHGAGKGRALREQTMRAVPFRHLREFQEVKTLVRRMARRLAS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LHQRRMKKSRRGMLDARRTLVAGIRHDGIPMRLHWRQRPVQKSRVMVICDVSSSVSDAAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHCCCCCCCEEEEEECCCCHHHHHH
FLLQFLYAMNDVLPRVRSFAFASRFDEITEDFQRYSPDVAVGRVLDRLSGSGTDYAEMFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHH
DFWRRCERELDSHTTVIILGDARNNYLPEGAEVLQQIRRRVKQVWWLNPEARSRWNSGDA
HHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHH
VMDRYLPHCRMARQCASLDDLERIVDSLLKGLN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA