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The map label for this gene is cyoC [H]

Identifier: 110635862

GI number: 110635862

Start: 3807743

End: 3808348

Strand: Reverse

Name: cyoC [H]

Synonym: Meso_3534

Alternate gene names: 110635862

Gene position: 3808348-3807743 (Counterclockwise)

Preceding gene: 110635863

Following gene: 110635861

Centisome position: 86.31

GC content: 61.22

Gene sequence:

>606_bases
ATGACAGAAGCCGCCGCCGCAGCCAGCGACGCGCATTCCCATTCCACTCCGCGGGAAGAAAAGGCGTTTGGGTTCTGGCT
CTATCTGATGAGCGACGCGATCATCTTCGCCTTGCTCTTCGCCACTTACGTGGTGATGGCCGGCAATGTTGCCGATGCAC
CGCCGCCGCACAGCCAATTCGACCTCACCCATGTTTTTGCCGAAACCATGATCCTGCTTGCGAGCAGCATTACCTTCGGC
TTCGCCACGGTGGCGATCGGGACGGGCCGACGCCCGGCTGTTCAGCTATGGCTGCTCGTCACCTTCGCGCTTGGCCTCGG
CTTCGTACTTATGGAATTGACCGAGTTTCGGAGCATGATCGCGGCGGGCGCGGGGCCGGACCAGAGCGGCGCACTCTCGG
CCTTTTTCACCCTTGTCGGCACGCACGGCCTTCACGTGAGCATCGGCCTCGTTTGGATCCTTGTCATGATGGCCCAGGTG
GCGCTGAAGGGGCTCTCGGTTCCGGTCGTTTCGCGCCTCGAGCGGCTGGGGCTGTTCTGGCACTTTCTGGACATCATCTG
GATCGGCATCTTCTCCGTCGTCTACCTTCCGGGATTGATCGAATGA

Upstream 100 bases:

>100_bases
AGGAGATCGAGAACGCGCGTTATGGTGCACTTGCCAGGGCGGTGCCCAAGAGCGTGGATCAACCTTCAACCGCCGCCGAA
CCGCTTCCAGGAAGCGCTGC

Downstream 100 bases:

>100_bases
AACAGCAGGCAAGCACCGGCCGGTCTTTAACACAGTACCTGACGGGCTTCGTGCTGGCGCTGGTGCTAACGGCAATCCCC
TTCGCGATCGTCGCCACGGG

Product: cytochrome c oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III; Ubiquinol oxidase chain C [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTEAAAAASDAHSHSTPREEKAFGFWLYLMSDAIIFALLFATYVVMAGNVADAPPPHSQFDLTHVFAETMILLASSITFG
FATVAIGTGRRPAVQLWLLVTFALGLGFVLMELTEFRSMIAAGAGPDQSGALSAFFTLVGTHGLHVSIGLVWILVMMAQV
ALKGLSVPVVSRLERLGLFWHFLDIIWIGIFSVVYLPGLIE

Sequences:

>Translated_201_residues
MTEAAAAASDAHSHSTPREEKAFGFWLYLMSDAIIFALLFATYVVMAGNVADAPPPHSQFDLTHVFAETMILLASSITFG
FATVAIGTGRRPAVQLWLLVTFALGLGFVLMELTEFRSMIAAGAGPDQSGALSAFFTLVGTHGLHVSIGLVWILVMMAQV
ALKGLSVPVVSRLERLGLFWHFLDIIWIGIFSVVYLPGLIE
>Mature_200_residues
TEAAAAASDAHSHSTPREEKAFGFWLYLMSDAIIFALLFATYVVMAGNVADAPPPHSQFDLTHVFAETMILLASSITFGF
ATVAIGTGRRPAVQLWLLVTFALGLGFVLMELTEFRSMIAAGAGPDQSGALSAFFTLVGTHGLHVSIGLVWILVMMAQVA
LKGLSVPVVSRLERLGLFWHFLDIIWIGIFSVVYLPGLIE

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=198, Percent_Identity=49.4949494949495, Blast_Score=194, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 21685; Mature: 21554

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAAAAASDAHSHSTPREEKAFGFWLYLMSDAIIFALLFATYVVMAGNVADAPPPHSQF
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DLTHVFAETMILLASSITFGFATVAIGTGRRPAVQLWLLVTFALGLGFVLMELTEFRSMI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGAGPDQSGALSAFFTLVGTHGLHVSIGLVWILVMMAQVALKGLSVPVVSRLERLGLFW
HCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HFLDIIWIGIFSVVYLPGLIE
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TEAAAAASDAHSHSTPREEKAFGFWLYLMSDAIIFALLFATYVVMAGNVADAPPPHSQF
CCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
DLTHVFAETMILLASSITFGFATVAIGTGRRPAVQLWLLVTFALGLGFVLMELTEFRSMI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGAGPDQSGALSAFFTLVGTHGLHVSIGLVWILVMMAQVALKGLSVPVVSRLERLGLFW
HCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HFLDIIWIGIFSVVYLPGLIE
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]