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The map label for this gene is yciF [H]

Identifier: 110635854

GI number: 110635854

Start: 3797284

End: 3797778

Strand: Reverse

Name: yciF [H]

Synonym: Meso_3526

Alternate gene names: 110635854

Gene position: 3797778-3797284 (Counterclockwise)

Preceding gene: 110635861

Following gene: 110635853

Centisome position: 86.07

GC content: 57.37

Gene sequence:

>495_bases
ATGCCCGCCCAGAACCGGACGCTTGAGAATTTGATGCTGGAGACGCTGAAGGACATCTATCACGCTGAAAAGCAAGTGCT
GAGGACGCTGCCGAAGATGACCAAGGCGGCGAAATCCGATGAACTGAAAAAGGCGCTGGAAAAGCATCGGCAGGAAACCG
AGGGCCAGATCGAACGCCTCGAGAAGGTTTTCGAGGCGATGGATCGGGCGCCGCGCGGAAAGCCTTGCGAGGCGATGCAG
GGACTCGTTGCCGAGGGGCAGGAGATCATGGAAGAGTTCTCCGACTCCGATGCCCTGGACGCAGGCCTGGTTTCAGCGAA
CCAATCGATCGAGCATTACGAGATTTCCCGCTATGGCACACTTCGCACTTGGGCACGACAGCTCGGGATGGAGGATGCAG
CAAAACTCTTCGAGCAAAATCTGGAGGAGGAGAAGAGGACTGACGAACTCCTCACCAAGCTCGCCGAGTCGCAAGCCAAC
AAGAAAGCGGCGTGA

Upstream 100 bases:

>100_bases
AAAGCGCCCTCGAAAACTGCCCCCAATTTCCAAGGATAATTGGAACCAGCAAGCGTCAACACCGTTCGAGGATTTCGCCA
AGAGAACACAGGAGAGCACA

Downstream 100 bases:

>100_bases
AGAGCCGCAGGATTTACCCCCAGAAAGGCGGTCCTCCGGCCGCCTTTCTGGCGAAGACGCACCACTCGACATTCAATCTG
CCATAGCAGTCGGCGCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MPAQNRTLENLMLETLKDIYHAEKQVLRTLPKMTKAAKSDELKKALEKHRQETEGQIERLEKVFEAMDRAPRGKPCEAMQ
GLVAEGQEIMEEFSDSDALDAGLVSANQSIEHYEISRYGTLRTWARQLGMEDAAKLFEQNLEEEKRTDELLTKLAESQAN
KKAA

Sequences:

>Translated_164_residues
MPAQNRTLENLMLETLKDIYHAEKQVLRTLPKMTKAAKSDELKKALEKHRQETEGQIERLEKVFEAMDRAPRGKPCEAMQ
GLVAEGQEIMEEFSDSDALDAGLVSANQSIEHYEISRYGTLRTWARQLGMEDAAKLFEQNLEEEKRTDELLTKLAESQAN
KKAA
>Mature_163_residues
PAQNRTLENLMLETLKDIYHAEKQVLRTLPKMTKAAKSDELKKALEKHRQETEGQIERLEKVFEAMDRAPRGKPCEAMQG
LVAEGQEIMEEFSDSDALDAGLVSANQSIEHYEISRYGTLRTWARQLGMEDAAKLFEQNLEEEKRTDELLTKLAESQANK
KAA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=159, Percent_Identity=44.6540880503145, Blast_Score=136, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18694; Mature: 18563

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQNRTLENLMLETLKDIYHAEKQVLRTLPKMTKAAKSDELKKALEKHRQETEGQIERL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKVFEAMDRAPRGKPCEAMQGLVAEGQEIMEEFSDSDALDAGLVSANQSIEHYEISRYGT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
LRTWARQLGMEDAAKLFEQNLEEEKRTDELLTKLAESQANKKAA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PAQNRTLENLMLETLKDIYHAEKQVLRTLPKMTKAAKSDELKKALEKHRQETEGQIERL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKVFEAMDRAPRGKPCEAMQGLVAEGQEIMEEFSDSDALDAGLVSANQSIEHYEISRYGT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
LRTWARQLGMEDAAKLFEQNLEEEKRTDELLTKLAESQANKKAA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]