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The map label for this gene is 110635835

Identifier: 110635835

GI number: 110635835

Start: 3777364

End: 3778653

Strand: Reverse

Name: 110635835

Synonym: Meso_3507

Alternate gene names: NA

Gene position: 3778653-3777364 (Counterclockwise)

Preceding gene: 110635836

Following gene: 110635834

Centisome position: 85.64

GC content: 61.55

Gene sequence:

>1290_bases
ATGAAGGTTCTTGTCACAGGCGCAACGGGGCTTATCGGCAGCACAGTTTGCGCCCGGCTAATGTCGGAGGGTCACCACGT
GATTGCCGTGGTGCGGCCGGGCAGCAATCCACTCCCTTCGGGAGCGGCCCAGATCGTAGAAATCGACATGGCCCGGGCCA
CCGGGGTGCAAATCTGGGCGGAGCATCTTTTCGGTGTAGAAGCGGTCGTCAACTGCGTTGGCGCGCTGCAGGACAGCGCG
CGGGAGGACACGGAAGGCGTTCATGTCACTGGGGCAGCAGCCCTTTTCCGGGCCTGTGAAAGGCTGAGCATAAGACGCGT
CATCCATTTTTCCGCAATTGGCGTCGACCGCGCCCAGCCCTCCGCTTTTTCCGCGACTAAGCTTGAGGGCGACCATTTGT
TGATGGAGCGGGATCTGGACTGGGTGATTCTCCGACCCTCAGTGGTGCTGGGGAGAAACGTCTTTGGTGCGAGTGCCCTT
ATCCGCGGCCTGTCAGCCCTGCCGTTCGCGCTCTCCCTCGGTCGCACTGCCCCCCTCCAGGTTGTCCAGCTCGACGATGT
GGCCGCCACGGTTGCATTCTTCATACAGCCGACCGCACCCGTCCAGGTGACATTGGAGCTGGCCGGGCCGGAACGACTGC
CCATGGACGAGGTGGTCGCACGATACAGGCAATGGCACGGCTGGCAGCCTGCCCGCCGGTTCAGCTTATCGGACAAGGCG
GCAAGCCTTTTCTACCGCGCAGGCGATCTCATCAGCTTTCTCGGCTGGCGGCCGCCGGTGCGCAGCACGGCACGAAAGGA
GATCGAGCGCGGCGCCGTCGGCAATCCGGGCCCCTGGCGATCGATGACGGGGATCCTGCCCACATCGCTTTCAATGGCAT
TGATCCGCGATCCTGTAACAGTGCAGGATCGCTGGTTTGCGCAGCTCTACTTCTTGAAACCAGTTATTTTCATAGTGCTG
CCGCTGTTTTGGATAGGCACCGGCATCGTCTCCCTGACGATCGGCTATCGCGAAGGCATCGAATTGATGCTGCGTACCGG
CGCGGGGCCGCTTTCAGCCTCCGGTGTGGTGGCGGGAGCAATCGCGGATATCCTGGTTGGGCTCGCCATCGCTTACCGGC
CAACCACCCGCCACGGCCTATATGGGGCGATCGCTTTGTCGGTTTTCTATATAATCTCCGGGACGATTCTCCTGCCGTCG
CTATGGGCCGAGCCGCTGGGTCCCTTGGCAAAGATATGGCCGATCCTTGTACTCCATTTCGTGGCGCTCGCGATTTACAA
GGAGCGGTAA

Upstream 100 bases:

>100_bases
GCCACGGCTCGCGTTTCGATGAATGGGGAGAGGTGATCGCGGGGCCGGCAGTTTCTGCGCTGAAACCGCGCGATATTCGG
GATTTGGAAAAAGGGGGACC

Downstream 100 bases:

>100_bases
GAGGCAATGCTCTACTTCTTCCTGAAATTCCTCCATGTGATCGGTGCGGCCGTGCTTCTGGGAACCGGCGCAGGCATCGC
ATTCTTCATGCTGATGGCCC

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NADH-Ubiquinone Oxidoreductase; NADH Dehydrogenase; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-4-Dehydrorhamnose Reductase; Oxidoreductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerases; Transmembrane Protein; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; NADH Dehydrogenase-Like Protein; Nucleoside-Diphosphate Sugar Epimerase; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH-Ubiquinone Oxidoreductase Putativ; NADH Ubiquinone Oxidoreductase; Saccharopine Dehydrogenase; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MKVLVTGATGLIGSTVCARLMSEGHHVIAVVRPGSNPLPSGAAQIVEIDMARATGVQIWAEHLFGVEAVVNCVGALQDSA
REDTEGVHVTGAAALFRACERLSIRRVIHFSAIGVDRAQPSAFSATKLEGDHLLMERDLDWVILRPSVVLGRNVFGASAL
IRGLSALPFALSLGRTAPLQVVQLDDVAATVAFFIQPTAPVQVTLELAGPERLPMDEVVARYRQWHGWQPARRFSLSDKA
ASLFYRAGDLISFLGWRPPVRSTARKEIERGAVGNPGPWRSMTGILPTSLSMALIRDPVTVQDRWFAQLYFLKPVIFIVL
PLFWIGTGIVSLTIGYREGIELMLRTGAGPLSASGVVAGAIADILVGLAIAYRPTTRHGLYGAIALSVFYIISGTILLPS
LWAEPLGPLAKIWPILVLHFVALAIYKER

Sequences:

>Translated_429_residues
MKVLVTGATGLIGSTVCARLMSEGHHVIAVVRPGSNPLPSGAAQIVEIDMARATGVQIWAEHLFGVEAVVNCVGALQDSA
REDTEGVHVTGAAALFRACERLSIRRVIHFSAIGVDRAQPSAFSATKLEGDHLLMERDLDWVILRPSVVLGRNVFGASAL
IRGLSALPFALSLGRTAPLQVVQLDDVAATVAFFIQPTAPVQVTLELAGPERLPMDEVVARYRQWHGWQPARRFSLSDKA
ASLFYRAGDLISFLGWRPPVRSTARKEIERGAVGNPGPWRSMTGILPTSLSMALIRDPVTVQDRWFAQLYFLKPVIFIVL
PLFWIGTGIVSLTIGYREGIELMLRTGAGPLSASGVVAGAIADILVGLAIAYRPTTRHGLYGAIALSVFYIISGTILLPS
LWAEPLGPLAKIWPILVLHFVALAIYKER
>Mature_429_residues
MKVLVTGATGLIGSTVCARLMSEGHHVIAVVRPGSNPLPSGAAQIVEIDMARATGVQIWAEHLFGVEAVVNCVGALQDSA
REDTEGVHVTGAAALFRACERLSIRRVIHFSAIGVDRAQPSAFSATKLEGDHLLMERDLDWVILRPSVVLGRNVFGASAL
IRGLSALPFALSLGRTAPLQVVQLDDVAATVAFFIQPTAPVQVTLELAGPERLPMDEVVARYRQWHGWQPARRFSLSDKA
ASLFYRAGDLISFLGWRPPVRSTARKEIERGAVGNPGPWRSMTGILPTSLSMALIRDPVTVQDRWFAQLYFLKPVIFIVL
PLFWIGTGIVSLTIGYREGIELMLRTGAGPLSASGVVAGAIADILVGLAIAYRPTTRHGLYGAIALSVFYIISGTILLPS
LWAEPLGPLAKIWPILVLHFVALAIYKER

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46357; Mature: 46357

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVTGATGLIGSTVCARLMSEGHHVIAVVRPGSNPLPSGAAQIVEIDMARATGVQIWA
CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHEEEEHHHHHHHHHHH
EHLFGVEAVVNCVGALQDSAREDTEGVHVTGAAALFRACERLSIRRVIHFSAIGVDRAQP
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SAFSATKLEGDHLLMERDLDWVILRPSVVLGRNVFGASALIRGLSALPFALSLGRTAPLQ
CCCCCEEECCCEEEEECCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
VVQLDDVAATVAFFIQPTAPVQVTLELAGPERLPMDEVVARYRQWHGWQPARRFSLSDKA
EEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHCCCCHHH
ASLFYRAGDLISFLGWRPPVRSTARKEIERGAVGNPGPWRSMTGILPTSLSMALIRDPVT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHCCCCC
VQDRWFAQLYFLKPVIFIVLPLFWIGTGIVSLTIGYREGIELMLRTGAGPLSASGVVAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHCHHHHEECCCCCCCCCCHHHHH
IADILVGLAIAYRPTTRHGLYGAIALSVFYIISGTILLPSLWAEPLGPLAKIWPILVLHF
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VALAIYKER
HHHHHHCCC
>Mature Secondary Structure
MKVLVTGATGLIGSTVCARLMSEGHHVIAVVRPGSNPLPSGAAQIVEIDMARATGVQIWA
CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHEEEEHHHHHHHHHHH
EHLFGVEAVVNCVGALQDSAREDTEGVHVTGAAALFRACERLSIRRVIHFSAIGVDRAQP
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SAFSATKLEGDHLLMERDLDWVILRPSVVLGRNVFGASALIRGLSALPFALSLGRTAPLQ
CCCCCEEECCCEEEEECCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
VVQLDDVAATVAFFIQPTAPVQVTLELAGPERLPMDEVVARYRQWHGWQPARRFSLSDKA
EEEEHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHCCCCHHH
ASLFYRAGDLISFLGWRPPVRSTARKEIERGAVGNPGPWRSMTGILPTSLSMALIRDPVT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHHHHHCCCCC
VQDRWFAQLYFLKPVIFIVLPLFWIGTGIVSLTIGYREGIELMLRTGAGPLSASGVVAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHCHHHHEECCCCCCCCCCHHHHH
IADILVGLAIAYRPTTRHGLYGAIALSVFYIISGTILLPSLWAEPLGPLAKIWPILVLHF
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VALAIYKER
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA