| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635764
Identifier: 110635764
GI number: 110635764
Start: 3714095
End: 3715120
Strand: Reverse
Name: 110635764
Synonym: Meso_3436
Alternate gene names: NA
Gene position: 3715120-3714095 (Counterclockwise)
Preceding gene: 110635765
Following gene: 110635762
Centisome position: 84.2
GC content: 62.38
Gene sequence:
>1026_bases ATGAGCGAGAGGCTGGAAGATATAGCGGCCCGGATGGTGGCCGACGGCAAAGGGATTCTCGCGGCGGACGAAAGCAGCGG CACGATCAAGAAGCGCTTCGACTCGATCGGCCTCGAATCGACCGCAGACAACCGCCGCGACTATCGCGAGATGTTGTTTC GCGCCGACGAGGCCATGCGGAACTCCATTTCGGGCGTTATTCTCTACGATGAGACCCTGCGCCAGCAGGCGAAGGACGGA ACGCCCCTCGTGGAGATCATCAGCCGTTCCGGCGCGGTGCCGGGGATTAAAGTGGATGCAGGCGCCAAGCCGCTGGCAGG CTTCCCGGGCGAGACCATTACGGAGGGCCTCGATGGTCTGCGCGAGCGCCTGAAGGAATATTACGAACTTGGCGCACGCT TCGCAAAGTGGCGCGGCGTGATCGCTGTTTCCGACGATCTTCCGACCTGGGGTTCGGTGAAGCAGAACGCGCAAGCGCTG GCTCGCTACGCCGCCCTTTGCCAGGAAGCCGGGATTGTACCGATCGTGGAGCCGGAAGTGCTGATGGACGGCACGCCCGC AACCCACTCCATCGATCGGTGCTACGAGGTTACCGAGTGGGTGCTGAAGACGGTCTTCACCGAGCTGTTCGATGCCCGTG TCGCGCTCGAAGGCATGGTGTTGAAGCCGAATATGGTTATTGACGGCAAGAACGCGCGCAAGGCGTCACGGGAGGAGGTG GCTGAAAAGACCGTTCGCTGCCTCAAGGCGACCGTTCCTGCGGCGGTGCCGGGTATCGCCTTCCTCTCAGGCGGCCAGTC CGACGAAGAGGCGACGGCGCATCTCTCTCTCATGAATGCATCCCACTCGATGCCATGGAAGCTGACCTTCTCTTACGGGC GTGCTCTGCAGGCCGCGGCACTCAAGGCTTGGGGCGGCAAAAGCGAGAATGTCGCTGCTGGCCAGCGCGCCTTTGCGCAC CGCGCGCGTATGAATGCTCTCGCCGCTCGAGGTGACTGGAAGCAAGAGCTGGAAGTGGCTGCTTAA
Upstream 100 bases:
>100_bases GAAATAATTCTTTACATTTCAATCGATTAGGGAGCTTTGTCCGGCATTCCGTTTTTTTGAGCCATCTGATATTCGGCATG TGTTCACACAGGAGGCAAGA
Downstream 100 bases:
>100_bases AGGTCGCGGCAGGCGGCTGGGCAGCCGGCCGCCTGCCTAGCCACGGAGATGGCTCAAGCCAACCGTTGCCGCCATCGCAG CGAGCGCGATTATCGCGAGT
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSERLEDIAARMVADGKGILAADESSGTIKKRFDSIGLESTADNRRDYREMLFRADEAMRNSISGVILYDETLRQQAKDG TPLVEIISRSGAVPGIKVDAGAKPLAGFPGETITEGLDGLRERLKEYYELGARFAKWRGVIAVSDDLPTWGSVKQNAQAL ARYAALCQEAGIVPIVEPEVLMDGTPATHSIDRCYEVTEWVLKTVFTELFDARVALEGMVLKPNMVIDGKNARKASREEV AEKTVRCLKATVPAAVPGIAFLSGGQSDEEATAHLSLMNASHSMPWKLTFSYGRALQAAALKAWGGKSENVAAGQRAFAH RARMNALAARGDWKQELEVAA
Sequences:
>Translated_341_residues MSERLEDIAARMVADGKGILAADESSGTIKKRFDSIGLESTADNRRDYREMLFRADEAMRNSISGVILYDETLRQQAKDG TPLVEIISRSGAVPGIKVDAGAKPLAGFPGETITEGLDGLRERLKEYYELGARFAKWRGVIAVSDDLPTWGSVKQNAQAL ARYAALCQEAGIVPIVEPEVLMDGTPATHSIDRCYEVTEWVLKTVFTELFDARVALEGMVLKPNMVIDGKNARKASREEV AEKTVRCLKATVPAAVPGIAFLSGGQSDEEATAHLSLMNASHSMPWKLTFSYGRALQAAALKAWGGKSENVAAGQRAFAH RARMNALAARGDWKQELEVAA >Mature_340_residues SERLEDIAARMVADGKGILAADESSGTIKKRFDSIGLESTADNRRDYREMLFRADEAMRNSISGVILYDETLRQQAKDGT PLVEIISRSGAVPGIKVDAGAKPLAGFPGETITEGLDGLRERLKEYYELGARFAKWRGVIAVSDDLPTWGSVKQNAQALA RYAALCQEAGIVPIVEPEVLMDGTPATHSIDRCYEVTEWVLKTVFTELFDARVALEGMVLKPNMVIDGKNARKASREEVA EKTVRCLKATVPAAVPGIAFLSGGQSDEEATAHLSLMNASHSMPWKLTFSYGRALQAAALKAWGGKSENVAAGQRAFAHR ARMNALAARGDWKQELEVAA
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Homo sapiens, GI34577112, Length=333, Percent_Identity=54.3543543543543, Blast_Score=352, Evalue=4e-97, Organism=Homo sapiens, GI34577110, Length=333, Percent_Identity=54.3543543543543, Blast_Score=352, Evalue=4e-97, Organism=Homo sapiens, GI4557305, Length=333, Percent_Identity=54.3543543543543, Blast_Score=352, Evalue=4e-97, Organism=Homo sapiens, GI193794814, Length=333, Percent_Identity=54.3543543543543, Blast_Score=352, Evalue=4e-97, Organism=Homo sapiens, GI4885063, Length=334, Percent_Identity=52.6946107784431, Blast_Score=337, Evalue=1e-92, Organism=Homo sapiens, GI40354205, Length=333, Percent_Identity=51.0510510510511, Blast_Score=326, Evalue=1e-89, Organism=Caenorhabditis elegans, GI71983985, Length=333, Percent_Identity=51.3513513513513, Blast_Score=328, Evalue=3e-90, Organism=Caenorhabditis elegans, GI25150450, Length=334, Percent_Identity=49.1017964071856, Blast_Score=325, Evalue=2e-89, Organism=Caenorhabditis elegans, GI71983990, Length=239, Percent_Identity=48.9539748953975, Blast_Score=222, Evalue=2e-58, Organism=Drosophila melanogaster, GI24650282, Length=334, Percent_Identity=52.9940119760479, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24650280, Length=334, Percent_Identity=52.9940119760479, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI24650278, Length=334, Percent_Identity=52.9940119760479, Blast_Score=347, Evalue=7e-96, Organism=Drosophila melanogaster, GI221459619, Length=334, Percent_Identity=52.9940119760479, Blast_Score=347, Evalue=9e-96, Organism=Drosophila melanogaster, GI24650288, Length=334, Percent_Identity=52.9940119760479, Blast_Score=347, Evalue=9e-96, Organism=Drosophila melanogaster, GI45553577, Length=334, Percent_Identity=52.6946107784431, Blast_Score=346, Evalue=1e-95, Organism=Drosophila melanogaster, GI24650304, Length=335, Percent_Identity=43.8805970149254, Blast_Score=289, Evalue=2e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 37029; Mature: 36897
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLEDIAARMVADGKGILAADESSGTIKKRFDSIGLESTADNRRDYREMLFRADEAMR CCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NSISGVILYDETLRQQAKDGTPLVEIISRSGAVPGIKVDAGAKPLAGFPGETITEGLDGL HCCCEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHH RERLKEYYELGARFAKWRGVIAVSDDLPTWGSVKQNAQALARYAALCQEAGIVPIVEPEV HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHH LMDGTPATHSIDRCYEVTEWVLKTVFTELFDARVALEGMVLKPNMVIDGKNARKASREEV EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCHHHHHHHHH AEKTVRCLKATVPAAVPGIAFLSGGQSDEEATAHLSLMNASHSMPWKLTFSYGRALQAAA HHHHHHHHHHHCCHHHCCHHEECCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH LKAWGGKSENVAAGQRAFAHRARMNALAARGDWKQELEVAA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure SERLEDIAARMVADGKGILAADESSGTIKKRFDSIGLESTADNRRDYREMLFRADEAMR CHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH NSISGVILYDETLRQQAKDGTPLVEIISRSGAVPGIKVDAGAKPLAGFPGETITEGLDGL HCCCEEEEECHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHH RERLKEYYELGARFAKWRGVIAVSDDLPTWGSVKQNAQALARYAALCQEAGIVPIVEPEV HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCHH LMDGTPATHSIDRCYEVTEWVLKTVFTELFDARVALEGMVLKPNMVIDGKNARKASREEV EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECCCHHHHHHHHH AEKTVRCLKATVPAAVPGIAFLSGGQSDEEATAHLSLMNASHSMPWKLTFSYGRALQAAA HHHHHHHHHHHCCHHHCCHHEECCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHH LKAWGGKSENVAAGQRAFAHRARMNALAARGDWKQELEVAA HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]