| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635730
Identifier: 110635730
GI number: 110635730
Start: 3678343
End: 3679383
Strand: Reverse
Name: 110635730
Synonym: Meso_3402
Alternate gene names: NA
Gene position: 3679383-3678343 (Counterclockwise)
Preceding gene: 110635731
Following gene: 110635729
Centisome position: 83.39
GC content: 60.42
Gene sequence:
>1041_bases ATGAAAAAGCATCTTGTCCGTTTCCGCCGCCTCTGGTGGCTTCTGCCTGCCTGCCTGAGCGGATTCCTACTGGCGTTCGC GCCGGCGGAACATGCACGCGCAGAAGAGATTGCCTGCACGGGCACGGACCTGGTGGGGCAGCTTGCCGAAAAAGACCCGG CGCTGCTGCGCAAAATCAAGGACGAGGCCGCGGCAATTCCCAACGGCAAGGGGCTTCTCTGGCGCGTCGAGAAGGACGGA ATTGCTCCATCCTACCTGTTCGGCACAATGCATCTGACCGATCCGCGGGTGACTGAGCTGCCTGCCGCGGCGAAAGGCGC TTTCGCCGAGGCTAAGACGGTGGTGATCGAGACCAAGGACATCCTGGACAGGAATGCAATGATGGCCGCAATGGCCGAAA AGCCGGAGCTGATGATGTTTTCCGGGAAGGAGAATCTTGCGGATCATCTGACGCAGGAGGAGCGCGAGAGTGTCGAAAAG GCGCTGAAAGAGCGCGGTATGCCCCTGGGAAGCGTCCTCAAGATGAAACCCTGGATCCTCATATCCCTGGTCTCGCTGCC TGAATGCGAGCTTCAGCGGCAGCGGCAGGGACTGCCTGTGCTCGACGCCAAAATTGCGCAGGAGGCGAAGGCCGAAGGCA AGGAGGTGGCCGGGCTCGAAACGGTTTCGGAACAACTCGCCGCCATGGCTTCGCTGCCCGTGGAGCTGCACATTCAAGGG CTCGTGGGTACGCTCGCCCTGGGTGACCGAATGGATGACCTGATCGAGACCATGGTCTCGCTCTATCTGGCAGGAGAAAC CGGGATGTTTCGGCCGGCGCTTGGTCAACTTCTCCGGATCGAGGGACAGGAGGAAGCAGATTATGCGGCCTTCGAGAAGC GAATGGTGGAGATGCGCAATTATGTGATGGCAGAACGCGCTGAACCGCTGCTCGAAAGCGGCAGTGCGTTCATCGCGGTT GGTGCCATGCATCTGCCGGGCGAAACAGGGCTTGTGACCTTGTTGCGGCAAGCCGGATACCGGCTACAGCCCGTCGATTA G
Upstream 100 bases:
>100_bases CAGCCGTCGACACCTCTCGGTTGCTCGAAATCTACGAAAATGCGCATCCGCGCCCCTGAGCGGCCAATTTCGCCTCTTTC CCGCGTTATCGGGTGAGCGC
Downstream 100 bases:
>100_bases CAAACGTTGCGGCGGGAAGCGGAACCCTCTGTGGCCATACGGCGTTAAATGCCTAAAGGAAAACGGAGATTGGTTCCGAT GGCTAATTATGACCGACCAA
Product: GumN
Products: NA
Alternate protein names: GumN Protein; Gumn Family Protein; Lipoprotein; GumN-Family Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MKKHLVRFRRLWWLLPACLSGFLLAFAPAEHARAEEIACTGTDLVGQLAEKDPALLRKIKDEAAAIPNGKGLLWRVEKDG IAPSYLFGTMHLTDPRVTELPAAAKGAFAEAKTVVIETKDILDRNAMMAAMAEKPELMMFSGKENLADHLTQEERESVEK ALKERGMPLGSVLKMKPWILISLVSLPECELQRQRQGLPVLDAKIAQEAKAEGKEVAGLETVSEQLAAMASLPVELHIQG LVGTLALGDRMDDLIETMVSLYLAGETGMFRPALGQLLRIEGQEEADYAAFEKRMVEMRNYVMAERAEPLLESGSAFIAV GAMHLPGETGLVTLLRQAGYRLQPVD
Sequences:
>Translated_346_residues MKKHLVRFRRLWWLLPACLSGFLLAFAPAEHARAEEIACTGTDLVGQLAEKDPALLRKIKDEAAAIPNGKGLLWRVEKDG IAPSYLFGTMHLTDPRVTELPAAAKGAFAEAKTVVIETKDILDRNAMMAAMAEKPELMMFSGKENLADHLTQEERESVEK ALKERGMPLGSVLKMKPWILISLVSLPECELQRQRQGLPVLDAKIAQEAKAEGKEVAGLETVSEQLAAMASLPVELHIQG LVGTLALGDRMDDLIETMVSLYLAGETGMFRPALGQLLRIEGQEEADYAAFEKRMVEMRNYVMAERAEPLLESGSAFIAV GAMHLPGETGLVTLLRQAGYRLQPVD >Mature_346_residues MKKHLVRFRRLWWLLPACLSGFLLAFAPAEHARAEEIACTGTDLVGQLAEKDPALLRKIKDEAAAIPNGKGLLWRVEKDG IAPSYLFGTMHLTDPRVTELPAAAKGAFAEAKTVVIETKDILDRNAMMAAMAEKPELMMFSGKENLADHLTQEERESVEK ALKERGMPLGSVLKMKPWILISLVSLPECELQRQRQGLPVLDAKIAQEAKAEGKEVAGLETVSEQLAAMASLPVELHIQG LVGTLALGDRMDDLIETMVSLYLAGETGMFRPALGQLLRIEGQEEADYAAFEKRMVEMRNYVMAERAEPLLESGSAFIAV GAMHLPGETGLVTLLRQAGYRLQPVD
Specific function: Unknown
COG id: COG3735
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37999; Mature: 37999
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHLVRFRRLWWLLPACLSGFLLAFAPAEHARAEEIACTGTDLVGQLAEKDPALLRKIK CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHEECCHHHHHHHHCCCHHHHHHHH DEAAAIPNGKGLLWRVEKDGIAPSYLFGTMHLTDPRVTELPAAAKGAFAEAKTVVIETKD HHHHCCCCCCCEEEEECCCCCCHHHHEEEEEECCCCHHHCCCHHHCCHHHCCEEEEECHH ILDRNAMMAAMAEKPELMMFSGKENLADHLTQEERESVEKALKERGMPLGSVLKMKPWIL HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHE ISLVSLPECELQRQRQGLPVLDAKIAQEAKAEGKEVAGLETVSEQLAAMASLPVELHIQG EEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEHH LVGTLALGDRMDDLIETMVSLYLAGETGMFRPALGQLLRIEGQEEADYAAFEKRMVEMRN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH YVMAERAEPLLESGSAFIAVGAMHLPGETGLVTLLRQAGYRLQPVD HHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKHLVRFRRLWWLLPACLSGFLLAFAPAEHARAEEIACTGTDLVGQLAEKDPALLRKIK CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHEECCHHHHHHHHCCCHHHHHHHH DEAAAIPNGKGLLWRVEKDGIAPSYLFGTMHLTDPRVTELPAAAKGAFAEAKTVVIETKD HHHHCCCCCCCEEEEECCCCCCHHHHEEEEEECCCCHHHCCCHHHCCHHHCCEEEEECHH ILDRNAMMAAMAEKPELMMFSGKENLADHLTQEERESVEKALKERGMPLGSVLKMKPWIL HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHE ISLVSLPECELQRQRQGLPVLDAKIAQEAKAEGKEVAGLETVSEQLAAMASLPVELHIQG EEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEHH LVGTLALGDRMDDLIETMVSLYLAGETGMFRPALGQLLRIEGQEEADYAAFEKRMVEMRN HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH YVMAERAEPLLESGSAFIAVGAMHLPGETGLVTLLRQAGYRLQPVD HHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA