| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is blh [H]
Identifier: 110635694
GI number: 110635694
Start: 3636170
End: 3637120
Strand: Reverse
Name: blh [H]
Synonym: Meso_3366
Alternate gene names: 110635694
Gene position: 3637120-3636170 (Counterclockwise)
Preceding gene: 110635696
Following gene: 110635693
Centisome position: 82.43
GC content: 59.41
Gene sequence:
>951_bases ATGAAGACACACCGGCTTCCTTCGGCTAAAGCACGAGCGCGTATTGGACAGGTTCGTCAGGAGGTGGCGATGGGATCCCC AAAGGCGCCGCAGGTAACGGCGTTTTACGACAAGCGCACCTTTTCGCTGCAATATGTCGCCGCCGACCCGGAAACGGGAA GATGTGCGATCATCGATCCGGTCCTCGATTATGACGAGAAGTCCGGCGCCACGGCGACGGATGGTGCCGATGCCATCCTT GATTTCATCGCCAGTCAGCGCCTTACCGTCCAGTGGATACTCGACACTCATCCGCACGCGGACCACCTCTCGGCGGCTGC CTATCTCAAGGAGAAGACCGGCGCGCCCACCGCCATCGGCGAACATGTGATCGACATGCAGAGGCTCTGGAAGGATATTT ATAACCTGCCGGATTTTCCCGCCGACGGTTCCCAATGGGACAAGCTTTTTGCCGAAGGCGAAAACTTCCTCGTGGGTGAA ATCGAAGCACGCGTGCTTTTTTCCCCAGGCCATACGCTGGCGTCGATCACCTATTTGATCGGGGATGCGGCCTTCGTGCA TGATACGCTCTTCATGCCGGACGGAGGGACGGCCCGGGCGGATTTTCCCGGCGGCAGCGCGGCAAGGCTCTGGCGCTCCA TCGAAGAAATCCTGTCGCTGCCGGATGAGACAAGGGTTTTTACCGGGCACGACTATCAGCCAGGCGGCCGGGAGCTGCGT TGGGAAAGCACCGTCGCCGAGCAAAAGGCCGAAAATATCCACATCGCGAAATGCCGCACCGAGGAAGAGTTCGTGAGGCT GCGTGAGGCCCGCGACAGAACCTTGCCCATGCCGAACCTCATCCTTCACGCGTTGCAGGTGAACATCAATGGCGGAAGGC TACCGGAGCCGGAATCAAATGGCCGGCGCTATCTGAAGATTCCTCTGAATGCGCTTGGCCGGTTCCGCTGA
Upstream 100 bases:
>100_bases TGCCTTAGAGAAACGGCGAGGTCAAGGCCGTTCGATACCTGTTCCCCATTCCTGGAGGCTAAGGCATACTGCCTTGGAAC GCGGGACTCATCCGGCTGGC
Downstream 100 bases:
>100_bases ACGGGAGGATTTACCGCCGCATTTTCGACAAGCCGATTGGCCATAGGCGTTCATCATTTTGTTGTTAGACGGTCATATTT TTATGCAATTTAGCTTCCTG
Product: beta-lactamase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKTHRLPSAKARARIGQVRQEVAMGSPKAPQVTAFYDKRTFSLQYVAADPETGRCAIIDPVLDYDEKSGATATDGADAIL DFIASQRLTVQWILDTHPHADHLSAAAYLKEKTGAPTAIGEHVIDMQRLWKDIYNLPDFPADGSQWDKLFAEGENFLVGE IEARVLFSPGHTLASITYLIGDAAFVHDTLFMPDGGTARADFPGGSAARLWRSIEEILSLPDETRVFTGHDYQPGGRELR WESTVAEQKAENIHIAKCRTEEEFVRLREARDRTLPMPNLILHALQVNINGGRLPEPESNGRRYLKIPLNALGRFR
Sequences:
>Translated_316_residues MKTHRLPSAKARARIGQVRQEVAMGSPKAPQVTAFYDKRTFSLQYVAADPETGRCAIIDPVLDYDEKSGATATDGADAIL DFIASQRLTVQWILDTHPHADHLSAAAYLKEKTGAPTAIGEHVIDMQRLWKDIYNLPDFPADGSQWDKLFAEGENFLVGE IEARVLFSPGHTLASITYLIGDAAFVHDTLFMPDGGTARADFPGGSAARLWRSIEEILSLPDETRVFTGHDYQPGGRELR WESTVAEQKAENIHIAKCRTEEEFVRLREARDRTLPMPNLILHALQVNINGGRLPEPESNGRRYLKIPLNALGRFR >Mature_316_residues MKTHRLPSAKARARIGQVRQEVAMGSPKAPQVTAFYDKRTFSLQYVAADPETGRCAIIDPVLDYDEKSGATATDGADAIL DFIASQRLTVQWILDTHPHADHLSAAAYLKEKTGAPTAIGEHVIDMQRLWKDIYNLPDFPADGSQWDKLFAEGENFLVGE IEARVLFSPGHTLASITYLIGDAAFVHDTLFMPDGGTARADFPGGSAARLWRSIEEILSLPDETRVFTGHDYQPGGRELR WESTVAEQKAENIHIAKCRTEEEFVRLREARDRTLPMPNLILHALQVNINGGRLPEPESNGRRYLKIPLNALGRFR
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=288, Percent_Identity=27.4305555555556, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1787158, Length=166, Percent_Identity=28.9156626506024, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17538952, Length=269, Percent_Identity=26.7657992565056, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI221330176, Length=300, Percent_Identity=27, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 35215; Mature: 35215
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHRLPSAKARARIGQVRQEVAMGSPKAPQVTAFYDKRTFSLQYVAADPETGRCAIIDP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEECCCCCCCEEEECH VLDYDEKSGATATDGADAILDFIASQRLTVQWILDTHPHADHLSAAAYLKEKTGAPTAIG HHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHH EHVIDMQRLWKDIYNLPDFPADGSQWDKLFAEGENFLVGEIEARVLFSPGHTLASITYLI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHH GDAAFVHDTLFMPDGGTARADFPGGSAARLWRSIEEILSLPDETRVFTGHDYQPGGRELR HCHHHHHHEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEE WESTVAEQKAENIHIAKCRTEEEFVRLREARDRTLPMPNLILHALQVNINGGRLPEPESN EHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHEEEHEEEECCCCCCCCCCC GRRYLKIPLNALGRFR CCEEEEEEHHHCCCCC >Mature Secondary Structure MKTHRLPSAKARARIGQVRQEVAMGSPKAPQVTAFYDKRTFSLQYVAADPETGRCAIIDP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEEECCCCCCCEEEECH VLDYDEKSGATATDGADAILDFIASQRLTVQWILDTHPHADHLSAAAYLKEKTGAPTAIG HHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHH EHVIDMQRLWKDIYNLPDFPADGSQWDKLFAEGENFLVGEIEARVLFSPGHTLASITYLI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHH GDAAFVHDTLFMPDGGTARADFPGGSAARLWRSIEEILSLPDETRVFTGHDYQPGGRELR HCHHHHHHEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEE WESTVAEQKAENIHIAKCRTEEEFVRLREARDRTLPMPNLILHALQVNINGGRLPEPESN EHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHEEEHEEEECCCCCCCCCCC GRRYLKIPLNALGRFR CCEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]