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The map label for this gene is ygfA [C]

Identifier: 110635525

GI number: 110635525

Start: 3465683

End: 3466270

Strand: Reverse

Name: ygfA [C]

Synonym: Meso_3196

Alternate gene names: 110635525

Gene position: 3466270-3465683 (Counterclockwise)

Preceding gene: 110635526

Following gene: 110635524

Centisome position: 78.56

GC content: 65.82

Gene sequence:

>588_bases
ATGACGGCCATTCCCCGCGAGATAAAAAGAAGGCTGCGCCAGGAGGCGCTCGCCCGCCGCGATGCGCTTGACCCGCGCTG
GCGTATAGAGGCTTCGCTGGGCTTTGCGGAATGGGCGGACCGGATCGCGCCGCTGCCGGGCACGGTCGTTTCCGGCTTCT
GGCCCATGCGCTCGGAAGTCGACGTGCGCCCGTTGATGGCCGCGCTGCGCGATCGTGGCGCGCGGCTCAGCTTGCCCGCC
ATCCTCGATAAGACCACGATCGTGTTTCGGGAGTTTGTGCGCGGGGCGCTGCTTGCCGATATGGGCTTCGGTACCTGGGG
GCCGGGCAAAGAGGCGGCTGAACTTGAACCCGGCATGATGCTCGTCCCGCTCGCCGCCTTCGATTCGCGCGGGCACCGCA
TCGGTTATGGGGCAGGCTATTACGATAGAGCCATAGAGAGGCTGCAGCGGCTAGGCCGCGCGCCGCGCCTGATCGGCATC
GCTTTTGATTGCCAGGAAGTCCCGGAAGTTCCCGACGAGGCACATGACATAGCGCTTCCCGAAATCCTCACCGAAAGCGG
CTTGCGCCGGTTCCCCCCGCCCCTGTAA

Upstream 100 bases:

>100_bases
TGGATCGCTGCTCTTCCCTCCCGTCTTCCTTTTTGCCATCCTGCCGGTTCCGCCCTGCGGGTTTCTTCCTCGCAGTGTCT
CCATCCGATGAAGGGCAGCG

Downstream 100 bases:

>100_bases
GAGCAGGCGATGCGTATCTTATTTCTTGGTGACATGGTCGGCCGTACGGGCCGCACCGCCGTCTGGGAGCGCCTTCCTGG
CCTCATCTCGGACTTTAGGC

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTAIPREIKRRLRQEALARRDALDPRWRIEASLGFAEWADRIAPLPGTVVSGFWPMRSEVDVRPLMAALRDRGARLSLPA
ILDKTTIVFREFVRGALLADMGFGTWGPGKEAAELEPGMMLVPLAAFDSRGHRIGYGAGYYDRAIERLQRLGRAPRLIGI
AFDCQEVPEVPDEAHDIALPEILTESGLRRFPPPL

Sequences:

>Translated_195_residues
MTAIPREIKRRLRQEALARRDALDPRWRIEASLGFAEWADRIAPLPGTVVSGFWPMRSEVDVRPLMAALRDRGARLSLPA
ILDKTTIVFREFVRGALLADMGFGTWGPGKEAAELEPGMMLVPLAAFDSRGHRIGYGAGYYDRAIERLQRLGRAPRLIGI
AFDCQEVPEVPDEAHDIALPEILTESGLRRFPPPL
>Mature_194_residues
TAIPREIKRRLRQEALARRDALDPRWRIEASLGFAEWADRIAPLPGTVVSGFWPMRSEVDVRPLMAALRDRGARLSLPAI
LDKTTIVFREFVRGALLADMGFGTWGPGKEAAELEPGMMLVPLAAFDSRGHRIGYGAGYYDRAIERLQRLGRAPRLIGIA
FDCQEVPEVPDEAHDIALPEILTESGLRRFPPPL

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=180, Percent_Identity=30, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21782; Mature: 21650

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIPREIKRRLRQEALARRDALDPRWRIEASLGFAEWADRIAPLPGTVVSGFWPMRSEV
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCHHHHCCCCCCCCC
DVRPLMAALRDRGARLSLPAILDKTTIVFREFVRGALLADMGFGTWGPGKEAAELEPGMM
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
LVPLAAFDSRGHRIGYGAGYYDRAIERLQRLGRAPRLIGIAFDCQEVPEVPDEAHDIALP
EEEHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCHHHHHHH
EILTESGLRRFPPPL
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
TAIPREIKRRLRQEALARRDALDPRWRIEASLGFAEWADRIAPLPGTVVSGFWPMRSEV
CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCHHHHCCCCCCCCC
DVRPLMAALRDRGARLSLPAILDKTTIVFREFVRGALLADMGFGTWGPGKEAAELEPGMM
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
LVPLAAFDSRGHRIGYGAGYYDRAIERLQRLGRAPRLIGIAFDCQEVPEVPDEAHDIALP
EEEHHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCHHHHHHH
EILTESGLRRFPPPL
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]