| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is gloB
Identifier: 110635409
GI number: 110635409
Start: 3351897
End: 3352664
Strand: Reverse
Name: gloB
Synonym: Meso_3080
Alternate gene names: 110635409
Gene position: 3352664-3351897 (Counterclockwise)
Preceding gene: 110635412
Following gene: 110635403
Centisome position: 75.98
GC content: 58.85
Gene sequence:
>768_bases ATGACGCTCGAAATCGAACAGTTCATGTGCCGCAGCGATAATTTCGGGATTCTCGCCCGCGATTCCGAAACCGGTATCAC GGCCCTGGTGGATGCACCGGAGGAGCAGGCTATTCTGGAGGCGATCAAGCGTACCGGGTGGACGCCCTCGCTGCTTCTCA TCACGCATCATCATGCCGATCACGTGGAAGCCAATCTGGCGCTCAAGGAGCGTTTCGGCCTTACCATTATTGGCCCCGCA AAGGAGGCGAGCAAGATTCCCGGCATTGACCGGCAGGTTAACGAGGGCGACGTGGTGCGCGTCGGCAACCAGGAAGCGCG GGTGATCGAAACGCCCGGGCATACGGCAGGTCATATCACCTTTTATTTTGCCAAGGCCGGCATTGCGTTCACCGCAGACA CGCTGTTTGCGCTGGGGTGCGGCCGGCTCTTCGAATGCAAGCCACCGGTCATGTACGAGTCGCTCAAGAAACTGGTCGAA CTGCCGCTCGAGACCGTCATCTATTGCGGCCACGAATATACGGAGTCCAACGCCCGTTTCGCGCTTTCGGTCGACCCGAC CAATTCCGCACTCAAGGAGAGGGCGAAGAAGATCGAGGCACTGAGGCGCGAAGGCAGACCCACGCTGCCCACCACGCTCG GCGAAGAAATGGCCACGAATCCCTTCCTGCGTTGCCATGACCCGGTTCTTCGGAACAATCTCGGCATGAAGAACGCTGCG GATGTCGAGGTCTTTGCCGAAATCCGCAAAAGGAAGGACGTGTTCTAG
Upstream 100 bases:
>100_bases AAGAGGGTAAGCATCCCCGGCGATTGCTTCAAGAAAGTCTTTCGGCGGGTGACAAAGGTTGGCCTAAACTTTATGTCTCA CGGGAACAAAGGAGGCGACG
Downstream 100 bases:
>100_bases CCTCAGGCCGCGTTGCCCGCGGTCGCCTGCTTGCGGCGGAGGATCATATTCTTCGCGGCAAGCGCTGCGCCGCCCGTGAT GAGAAGACATGCGGCAAGAG
Product: beta-lactamase-like
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTLEIEQFMCRSDNFGILARDSETGITALVDAPEEQAILEAIKRTGWTPSLLLITHHHADHVEANLALKERFGLTIIGPA KEASKIPGIDRQVNEGDVVRVGNQEARVIETPGHTAGHITFYFAKAGIAFTADTLFALGCGRLFECKPPVMYESLKKLVE LPLETVIYCGHEYTESNARFALSVDPTNSALKERAKKIEALRREGRPTLPTTLGEEMATNPFLRCHDPVLRNNLGMKNAA DVEVFAEIRKRKDVF
Sequences:
>Translated_255_residues MTLEIEQFMCRSDNFGILARDSETGITALVDAPEEQAILEAIKRTGWTPSLLLITHHHADHVEANLALKERFGLTIIGPA KEASKIPGIDRQVNEGDVVRVGNQEARVIETPGHTAGHITFYFAKAGIAFTADTLFALGCGRLFECKPPVMYESLKKLVE LPLETVIYCGHEYTESNARFALSVDPTNSALKERAKKIEALRREGRPTLPTTLGEEMATNPFLRCHDPVLRNNLGMKNAA DVEVFAEIRKRKDVF >Mature_254_residues TLEIEQFMCRSDNFGILARDSETGITALVDAPEEQAILEAIKRTGWTPSLLLITHHHADHVEANLALKERFGLTIIGPAK EASKIPGIDRQVNEGDVVRVGNQEARVIETPGHTAGHITFYFAKAGIAFTADTLFALGCGRLFECKPPVMYESLKKLVEL PLETVIYCGHEYTESNARFALSVDPTNSALKERAKKIEALRREGRPTLPTTLGEEMATNPFLRCHDPVLRNNLGMKNAAD VEVFAEIRKRKDVF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI94538322, Length=261, Percent_Identity=33.3333333333333, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI94538320, Length=260, Percent_Identity=33.0769230769231, Blast_Score=152, Evalue=2e-37, Organism=Homo sapiens, GI21703352, Length=256, Percent_Identity=33.203125, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI116642887, Length=256, Percent_Identity=33.203125, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI14150041, Length=246, Percent_Identity=34.9593495934959, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI46361987, Length=202, Percent_Identity=35.1485148514851, Blast_Score=113, Evalue=1e-25, Organism=Homo sapiens, GI41327741, Length=169, Percent_Identity=31.3609467455621, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1786406, Length=247, Percent_Identity=40.080971659919, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1787158, Length=139, Percent_Identity=33.0935251798561, Blast_Score=81, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17536925, Length=265, Percent_Identity=35.0943396226415, Blast_Score=147, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17538952, Length=125, Percent_Identity=35.2, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320478, Length=252, Percent_Identity=30.5555555555556, Blast_Score=88, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6324614, Length=226, Percent_Identity=31.858407079646, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI21356335, Length=263, Percent_Identity=36.1216730038023, Blast_Score=162, Evalue=1e-40, Organism=Drosophila melanogaster, GI24667711, Length=263, Percent_Identity=36.1216730038023, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI24667703, Length=263, Percent_Identity=36.1216730038023, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI221330176, Length=171, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_MESSB (Q11DS3)
Other databases:
- EMBL: CP000390 - RefSeq: YP_675617.1 - ProteinModelPortal: Q11DS3 - SMR: Q11DS3 - STRING: Q11DS3 - GeneID: 4183267 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_3080 - NMPDR: fig|266779.1.peg.204 - eggNOG: COG0491 - HOGENOM: HBG753931 - OMA: FGHEYTL - PhylomeDB: Q11DS3 - ProtClustDB: CLSK863794 - BioCyc: MSP266779:MESO_3080-MONOMER - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849 - TIGRFAMs: TIGR03413
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 28314; Mature: 28183
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLEIEQFMCRSDNFGILARDSETGITALVDAPEEQAILEAIKRTGWTPSLLLITHHHAD CEEEHHHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCC HVEANLALKERFGLTIIGPAKEASKIPGIDRQVNEGDVVRVGNQEARVIETPGHTAGHIT CHHHHEEEHHHCCEEEECCCHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEE FYFAKAGIAFTADTLFALGCGRLFECKPPVMYESLKKLVELPLETVIYCGHEYTESNARF EEEEECCCEEHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCEE ALSVDPTNSALKERAKKIEALRREGRPTLPTTLGEEMATNPFLRCHDPVLRNNLGMKNAA EEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEECCHHHHCCCCCCCCC DVEVFAEIRKRKDVF HHHHHHHHHHHCCCC >Mature Secondary Structure TLEIEQFMCRSDNFGILARDSETGITALVDAPEEQAILEAIKRTGWTPSLLLITHHHAD EEEHHHHHHCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCC HVEANLALKERFGLTIIGPAKEASKIPGIDRQVNEGDVVRVGNQEARVIETPGHTAGHIT CHHHHEEEHHHCCEEEECCCHHHHHCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEE FYFAKAGIAFTADTLFALGCGRLFECKPPVMYESLKKLVELPLETVIYCGHEYTESNARF EEEEECCCEEHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCEE ALSVDPTNSALKERAKKIEALRREGRPTLPTTLGEEMATNPFLRCHDPVLRNNLGMKNAA EEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEECCHHHHCCCCCCCCC DVEVFAEIRKRKDVF HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA