| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is metA
Identifier: 110635412
GI number: 110635412
Start: 3354615
End: 3355553
Strand: Reverse
Name: metA
Synonym: Meso_3083
Alternate gene names: 110635412
Gene position: 3355553-3354615 (Counterclockwise)
Preceding gene: 110635415
Following gene: 110635409
Centisome position: 76.05
GC content: 59.11
Gene sequence:
>939_bases ATGCCGATCAAGATTCCCGATCAGCTGCCTGCCCGCGAGGTGCTTGTGCGCGAGGGCGTCTCCGTCATGGATGAAAAGAC GGCGCTGCGTCAGGACATTCGTCCGCTGCAGATCGGGCTCTTGAATCTCATGCCGAACAAGATCCGCACCGAGACGCAGT TCGCCCGCCTGATCGGGGCCAGCCCGCTCCAGGTGGAACTGACGCTGGTGCGCATCGGCAACCACAAAGCCAAGAACACG CCGGAAGATCACCTCATCACCTTCTACGAAACCTGGGAAGAGGTGGCGCCGCGCAAGTTCGACGGCTTTATCGTGACGGG TGCTCCCATCGAGCTTTTGCCTTACGAGGACGTCACCTATTGGAACGAAATGACGCGCATTCTCGATTGGACCACTTCCC ACGTCCACTCCTCGTTTTTCATCTGCTGGGGCGCGATGGCCGCGGCCTGGCATTTCCACGGCATTCCGAAGCATACGTTG GATAAAAAGGCGTTTGGGGTGTTCCGGCACCGCAACAATGCTCCCGCCTCTCCCTATCTCGCCGGGTTCTCGGACGATTT GGCGCTTCCAGTCTCGCGCTGGACGGAGGTGCGCACTGCCGATATTCCCGCTAATTCCGGCTTGGAAATGCTCATGGATT CGGACGAAACCGGCCCATGCCTGCTCGCGGAAGCCGCCGGGAACCGGCTCTATATGTTCAATCACATCGAGTATGATTCC ACATCGCTCAAGGAGGAGTATGACCGGGACGTGGCCGCCGGTGTGCCGATCGAGGTGCCACATGAATATTACCCGGGCAA TGATCCGACGCGGCCGCCGCTCAATCGCTGGCGCTCACACGCACATCTGCTCTTCGGCAACTGGATCAACCAGGTGTATC AGACCACGCCTTACGATCTGGACAAGATCGGCAGGAACTTGGAGCATGCCCTTTCCTGA
Upstream 100 bases:
>100_bases TTGCAGCCACGTAAAAGAAGTCGCTAAAAGGCCGTGGATACCAAGTCCGTTGGGACCGGCCGCGATTTCGCCGCCGGTCT TTTTTGTTTGGAGTTTCACG
Downstream 100 bases:
>100_bases CGGGCAACCAGGATAGCCTCATCACCCTAGAAGCGCCGCTGCATCTTTTGCGAGCTTCAGCGTGAGTTCGCCTGCGGGCA TTGCCCTTGCAAGTGGCGCG
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MPIKIPDQLPAREVLVREGVSVMDEKTALRQDIRPLQIGLLNLMPNKIRTETQFARLIGASPLQVELTLVRIGNHKAKNT PEDHLITFYETWEEVAPRKFDGFIVTGAPIELLPYEDVTYWNEMTRILDWTTSHVHSSFFICWGAMAAAWHFHGIPKHTL DKKAFGVFRHRNNAPASPYLAGFSDDLALPVSRWTEVRTADIPANSGLEMLMDSDETGPCLLAEAAGNRLYMFNHIEYDS TSLKEEYDRDVAAGVPIEVPHEYYPGNDPTRPPLNRWRSHAHLLFGNWINQVYQTTPYDLDKIGRNLEHALS
Sequences:
>Translated_312_residues MPIKIPDQLPAREVLVREGVSVMDEKTALRQDIRPLQIGLLNLMPNKIRTETQFARLIGASPLQVELTLVRIGNHKAKNT PEDHLITFYETWEEVAPRKFDGFIVTGAPIELLPYEDVTYWNEMTRILDWTTSHVHSSFFICWGAMAAAWHFHGIPKHTL DKKAFGVFRHRNNAPASPYLAGFSDDLALPVSRWTEVRTADIPANSGLEMLMDSDETGPCLLAEAAGNRLYMFNHIEYDS TSLKEEYDRDVAAGVPIEVPHEYYPGNDPTRPPLNRWRSHAHLLFGNWINQVYQTTPYDLDKIGRNLEHALS >Mature_311_residues PIKIPDQLPAREVLVREGVSVMDEKTALRQDIRPLQIGLLNLMPNKIRTETQFARLIGASPLQVELTLVRIGNHKAKNTP EDHLITFYETWEEVAPRKFDGFIVTGAPIELLPYEDVTYWNEMTRILDWTTSHVHSSFFICWGAMAAAWHFHGIPKHTLD KKAFGVFRHRNNAPASPYLAGFSDDLALPVSRWTEVRTADIPANSGLEMLMDSDETGPCLLAEAAGNRLYMFNHIEYDST SLKEEYDRDVAAGVPIEVPHEYYPGNDPTRPPLNRWRSHAHLLFGNWINQVYQTTPYDLDKIGRNLEHALS
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family
Homologues:
Organism=Escherichia coli, GI1790443, Length=309, Percent_Identity=43.3656957928803, Blast_Score=268, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): META_MESSB (Q11DS0)
Other databases:
- EMBL: CP000390 - RefSeq: YP_675620.1 - ProteinModelPortal: Q11DS0 - SMR: Q11DS0 - STRING: Q11DS0 - GeneID: 4183270 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_3083 - NMPDR: fig|266779.1.peg.201 - eggNOG: COG1897 - HOGENOM: HBG362506 - OMA: QAGLYYH - PhylomeDB: Q11DS0 - ProtClustDB: PRK05368 - BioCyc: MSP266779:MESO_3083-MONOMER - GO: GO:0005737 - HAMAP: MF_00295 - InterPro: IPR005697 - PANTHER: PTHR20919 - PIRSF: PIRSF000450 - ProDom: PD037892 - TIGRFAMs: TIGR01001
Pfam domain/function: PF04204 HTS
EC number: =2.3.1.46
Molecular weight: Translated: 35573; Mature: 35442
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: ACT_SITE 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKIPDQLPAREVLVREGVSVMDEKTALRQDIRPLQIGLLNLMPNKIRTETQFARLIGA CCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCC SPLQVELTLVRIGNHKAKNTPEDHLITFYETWEEVAPRKFDGFIVTGAPIELLPYEDVTY CCCEEEEEEEEECCCCCCCCCHHHEEEHHHHHHHHCCCCCCCEEEECCCEEEECCCCHHH WNEMTRILDWTTSHVHSSFFICWGAMAAAWHFHGIPKHTLDKKAFGVFRHRNNAPASPYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEE AGFSDDLALPVSRWTEVRTADIPANSGLEMLMDSDETGPCLLAEAAGNRLYMFNHIEYDS CCCCCCCCCCHHHHCCEEEECCCCCCCHHEEECCCCCCCEEEEECCCCEEEEEEECCCCC TSLKEEYDRDVAAGVPIEVPHEYYPGNDPTRPPLNRWRSHAHLLFGNWINQVYQTTPYDL HHHHHHHCCHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH DKIGRNLEHALS HHHCCHHHHHCC >Mature Secondary Structure PIKIPDQLPAREVLVREGVSVMDEKTALRQDIRPLQIGLLNLMPNKIRTETQFARLIGA CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCC SPLQVELTLVRIGNHKAKNTPEDHLITFYETWEEVAPRKFDGFIVTGAPIELLPYEDVTY CCCEEEEEEEEECCCCCCCCCHHHEEEHHHHHHHHCCCCCCCEEEECCCEEEECCCCHHH WNEMTRILDWTTSHVHSSFFICWGAMAAAWHFHGIPKHTLDKKAFGVFRHRNNAPASPYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEE AGFSDDLALPVSRWTEVRTADIPANSGLEMLMDSDETGPCLLAEAAGNRLYMFNHIEYDS CCCCCCCCCCHHHHCCEEEECCCCCCCHHEEECCCCCCCEEEEECCCCEEEEEEECCCCC TSLKEEYDRDVAAGVPIEVPHEYYPGNDPTRPPLNRWRSHAHLLFGNWINQVYQTTPYDL HHHHHHHCCHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH DKIGRNLEHALS HHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA