| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is opgH [H]
Identifier: 110635371
GI number: 110635371
Start: 3314652
End: 3316448
Strand: Reverse
Name: opgH [H]
Synonym: Meso_3042
Alternate gene names: 110635371
Gene position: 3316448-3314652 (Counterclockwise)
Preceding gene: 110635372
Following gene: 110635370
Centisome position: 75.16
GC content: 60.77
Gene sequence:
>1797_bases ATGGTTACGTTGCGGCGCGCCGCCTCTGCTCTCTTTGCATTGGCGATGGCACTTACGGCCAGCTATCTGGCGATAGGCTA TTTCGATTCAGATGGGTTGCAGTGGCTGGATCTCGCGCGCGTGGTCCTGCTGGCGCTCAGCACGGCCTGGCTCGCCTGGG GCGCGGTCCTGGCACTCAACGGGCTGTTCTCGCTTCGGCGTGGACGCGTGCCTCGCCTGCGCGGTCCGATCACGGTCAGA ACTGCCGTGGTGGTGCCGGTTTATAACGAGGACCCCGTCAAATCCTTCTCGCATGTGGCTGCGATGGTGAAGAGCATCGG CCGGACATCCTTCGCCAGCCAATTCGATTTCGTCATTCTTTCGGACACCACCGATCAACGGATTGCCGCGAAAGAGGAGT TCTGGCTTGTGCGGCTCAAAACCGAGGTGAGCCATATCTGCAAGATCTTTTACCGGCGTCGTCCCTCAAATCCGGGAAAG AAGGCGGGCAATATCGCTGATTTCATCAAAACCTCCGGTGCGCTGTACGACTACCTCATCATCCTTGACGCCGACAGCCT GATGGAGGGCTCGACGATGGTGGAGATGGTGCGGCGCATGGAGGCCGATCCTCAGCTTGGTTTGTTGCAGACCTTGCCAA AGGTCATTCGCGCACGCTCGTTCTTCGGACGGGCCATTCAGTTTTCCGCCTCTTACTACTCTCCTATCTACGCTCAGGGC CTCGCACTGCTGCAAGGCACGGAGGGTCCTTTTTGGGGCCACAACGCGATTACCCGTACACGCGCTTTCGCGCAGAGCTG CGGCCTCCCGCAATTGCCGGGTAAGCCCCCCTTCGGCGGCCATATCCTCAGCCACGATTTTGTCGAAGCGGCTCTCCTGG CGCGGAATGGATGGAAGGTGAGAATAGATCCCGATCTGCGCGGTTCTTTCGAGGAGGGACCGGATAACGTCATTGATTAC GCCAAGCGCGACCGCCGCTGGTGCCAGGGTAATCTGCAGCACAGCCGGATCTTGCCCGCCCCGGGATTGAAGAGATGGAG CCGTTTCGTCTTCGTACAAGGTATTATGGCGTATGTTTCGGCGCCTCTTTGGGCGCTCTTCCTTGCTGCCAGTATTATCG CTCCGGCCATGACCGTGATCCCGGATTATTTCCCGGCGCCTGGATTGCCCGTTTTTCCCAAAGTTGAAACGGCGAATGCC CTGGCGCTGCTTACCGGCGTGGTCGGGCTTCTTCTCGGGCCGAAGCTCCTTATTCTGATCGACGGCATGATAACCGGGCG GAATCGCCGCTTTGGCGGAAGCATCCGGGCTTTCTGCAGCGTCGTGATCGAGATTGTCTGCACGAGCGTCCTCGCGCCGA TCATGATGCTGTTCCAGACGCGGGCGGTGCTTGAGATTCTGGCCGGGGCGGATGCAGGATGGCCTGCTGCCAACCGGGAA GCCGGCCGCGTCAGCCTCAGCGAGGCCTGGGCGGCCAGTTGGTGGGTCATGGTGGTCGGGCTTATAACGATTGGAGCGGC CTACCGGCTTGCGCCGGATTACCTGATTTTCGTGCTTCTGGTGGCGGGTCCTCAGGTCGTGGCGCCGTTTGTGATCAGCG GCACGTCTTATGCCGGCCAGGCGCTCCGCCGCGCGCCGGTCAGCCTGTTCGTCACACCCGAGGAACTGACGCCCTCGCAG GTAATGCGCGAGCAGCAGAATGTCCTGGTGCGTTGGCGAGCGGACACGGTGGAACTTTCGGACTCAATAATGGCCGAGCA GTCGGAGGATCCGGCGGAGGCCAGGACCAGCCGATGA
Upstream 100 bases:
>100_bases GTCGCGGCGCTGGCGCGGCTTTTTGCTGCGGCCGTTCCTTCAGTGGCTGGCGCTGAGATAGATATCTTGCCGGCAGACCG GCTTTTGAACGGGATTTGTG
Downstream 100 bases:
>100_bases CCACCACGCTTCCGCAGTTGGGCGGGCGCGATCACAGGATAGATGCCTTCCGCGGCATTGCTCTCCTGATGATCTTCGTC AATCACGTCCCGGGCAACGC
Product: glucosyltransferase MdoH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MVTLRRAASALFALAMALTASYLAIGYFDSDGLQWLDLARVVLLALSTAWLAWGAVLALNGLFSLRRGRVPRLRGPITVR TAVVVPVYNEDPVKSFSHVAAMVKSIGRTSFASQFDFVILSDTTDQRIAAKEEFWLVRLKTEVSHICKIFYRRRPSNPGK KAGNIADFIKTSGALYDYLIILDADSLMEGSTMVEMVRRMEADPQLGLLQTLPKVIRARSFFGRAIQFSASYYSPIYAQG LALLQGTEGPFWGHNAITRTRAFAQSCGLPQLPGKPPFGGHILSHDFVEAALLARNGWKVRIDPDLRGSFEEGPDNVIDY AKRDRRWCQGNLQHSRILPAPGLKRWSRFVFVQGIMAYVSAPLWALFLAASIIAPAMTVIPDYFPAPGLPVFPKVETANA LALLTGVVGLLLGPKLLILIDGMITGRNRRFGGSIRAFCSVVIEIVCTSVLAPIMMLFQTRAVLEILAGADAGWPAANRE AGRVSLSEAWAASWWVMVVGLITIGAAYRLAPDYLIFVLLVAGPQVVAPFVISGTSYAGQALRRAPVSLFVTPEELTPSQ VMREQQNVLVRWRADTVELSDSIMAEQSEDPAEARTSR
Sequences:
>Translated_598_residues MVTLRRAASALFALAMALTASYLAIGYFDSDGLQWLDLARVVLLALSTAWLAWGAVLALNGLFSLRRGRVPRLRGPITVR TAVVVPVYNEDPVKSFSHVAAMVKSIGRTSFASQFDFVILSDTTDQRIAAKEEFWLVRLKTEVSHICKIFYRRRPSNPGK KAGNIADFIKTSGALYDYLIILDADSLMEGSTMVEMVRRMEADPQLGLLQTLPKVIRARSFFGRAIQFSASYYSPIYAQG LALLQGTEGPFWGHNAITRTRAFAQSCGLPQLPGKPPFGGHILSHDFVEAALLARNGWKVRIDPDLRGSFEEGPDNVIDY AKRDRRWCQGNLQHSRILPAPGLKRWSRFVFVQGIMAYVSAPLWALFLAASIIAPAMTVIPDYFPAPGLPVFPKVETANA LALLTGVVGLLLGPKLLILIDGMITGRNRRFGGSIRAFCSVVIEIVCTSVLAPIMMLFQTRAVLEILAGADAGWPAANRE AGRVSLSEAWAASWWVMVVGLITIGAAYRLAPDYLIFVLLVAGPQVVAPFVISGTSYAGQALRRAPVSLFVTPEELTPSQ VMREQQNVLVRWRADTVELSDSIMAEQSEDPAEARTSR >Mature_598_residues MVTLRRAASALFALAMALTASYLAIGYFDSDGLQWLDLARVVLLALSTAWLAWGAVLALNGLFSLRRGRVPRLRGPITVR TAVVVPVYNEDPVKSFSHVAAMVKSIGRTSFASQFDFVILSDTTDQRIAAKEEFWLVRLKTEVSHICKIFYRRRPSNPGK KAGNIADFIKTSGALYDYLIILDADSLMEGSTMVEMVRRMEADPQLGLLQTLPKVIRARSFFGRAIQFSASYYSPIYAQG LALLQGTEGPFWGHNAITRTRAFAQSCGLPQLPGKPPFGGHILSHDFVEAALLARNGWKVRIDPDLRGSFEEGPDNVIDY AKRDRRWCQGNLQHSRILPAPGLKRWSRFVFVQGIMAYVSAPLWALFLAASIIAPAMTVIPDYFPAPGLPVFPKVETANA LALLTGVVGLLLGPKLLILIDGMITGRNRRFGGSIRAFCSVVIEIVCTSVLAPIMMLFQTRAVLEILAGADAGWPAANRE AGRVSLSEAWAASWWVMVVGLITIGAAYRLAPDYLIFVLLVAGPQVVAPFVISGTSYAGQALRRAPVSLFVTPEELTPSQ VMREQQNVLVRWRADTVELSDSIMAEQSEDPAEARTSR
Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]
COG id: COG2943
COG function: function code M; Membrane glycosyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. OpgH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787287, Length=544, Percent_Identity=37.3161764705882, Blast_Score=324, Evalue=1e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 65600; Mature: 65600
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLRRAASALFALAMALTASYLAIGYFDSDGLQWLDLARVVLLALSTAWLAWGAVLALN CCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFSLRRGRVPRLRGPITVRTAVVVPVYNEDPVKSFSHVAAMVKSIGRTSFASQFDFVIL HHHHHHCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCEEEE SDTTDQRIAAKEEFWLVRLKTEVSHICKIFYRRRPSNPGKKAGNIADFIKTSGALYDYLI ECCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEE ILDADSLMEGSTMVEMVRRMEADPQLGLLQTLPKVIRARSFFGRAIQFSASYYSPIYAQG EECCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEECCHHCCHHHHHH LALLQGTEGPFWGHNAITRTRAFAQSCGLPQLPGKPPFGGHILSHDFVEAALLARNGWKV HHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE RIDPDLRGSFEEGPDNVIDYAKRDRRWCQGNLQHSRILPAPGLKRWSRFVFVQGIMAYVS EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH APLWALFLAASIIAPAMTVIPDYFPAPGLPVFPKVETANALALLTGVVGLLLGPKLLILI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEE DGMITGRNRRFGGSIRAFCSVVIEIVCTSVLAPIMMLFQTRAVLEILAGADAGWPAANRE ECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AGRVSLSEAWAASWWVMVVGLITIGAAYRLAPDYLIFVLLVAGPQVVAPFVISGTSYAGQ CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCEECCCCHHHH ALRRAPVSLFVTPEELTPSQVMREQQNVLVRWRADTVELSDSIMAEQSEDPAEARTSR HHHHCCCEEEEECHHCCHHHHHHHHHCEEEEEECCHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure MVTLRRAASALFALAMALTASYLAIGYFDSDGLQWLDLARVVLLALSTAWLAWGAVLALN CCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFSLRRGRVPRLRGPITVRTAVVVPVYNEDPVKSFSHVAAMVKSIGRTSFASQFDFVIL HHHHHHCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCEEEE SDTTDQRIAAKEEFWLVRLKTEVSHICKIFYRRRPSNPGKKAGNIADFIKTSGALYDYLI ECCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEEEE ILDADSLMEGSTMVEMVRRMEADPQLGLLQTLPKVIRARSFFGRAIQFSASYYSPIYAQG EECCHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEECCHHCCHHHHHH LALLQGTEGPFWGHNAITRTRAFAQSCGLPQLPGKPPFGGHILSHDFVEAALLARNGWKV HHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE RIDPDLRGSFEEGPDNVIDYAKRDRRWCQGNLQHSRILPAPGLKRWSRFVFVQGIMAYVS EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH APLWALFLAASIIAPAMTVIPDYFPAPGLPVFPKVETANALALLTGVVGLLLGPKLLILI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEE DGMITGRNRRFGGSIRAFCSVVIEIVCTSVLAPIMMLFQTRAVLEILAGADAGWPAANRE ECCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC AGRVSLSEAWAASWWVMVVGLITIGAAYRLAPDYLIFVLLVAGPQVVAPFVISGTSYAGQ CCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCEECCCCHHHH ALRRAPVSLFVTPEELTPSQVMREQQNVLVRWRADTVELSDSIMAEQSEDPAEARTSR HHHHCCCEEEEECHHCCHHHHHHHHHCEEEEEECCHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12027885 [H]