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The map label for this gene is mdoD [H]

Identifier: 110635372

GI number: 110635372

Start: 3316627

End: 3318231

Strand: Reverse

Name: mdoD [H]

Synonym: Meso_3043

Alternate gene names: 110635372

Gene position: 3318231-3316627 (Counterclockwise)

Preceding gene: 110635373

Following gene: 110635371

Centisome position: 75.2

GC content: 59.44

Gene sequence:

>1605_bases
ATGGACAGGCGTTCATTCATCATCGGAGGAGGCGGGGCACTAGCGGGCATGACCGCTTTTCTGAACAATGCCGTCGCCCT
TGCACAGGATCAGGCCGAAACGGCGCAGCTTCAGCAGTCTCTCCCCGGGGAAACGCAACCCTTCTCGTTCGACCTCCTGA
CGGCCACGATGAAGCAGAAGGCCGAAAAAGAATATCAACCGGTAGAGGAAGCTCTGCCGGAATCGGTGACGGAGTTGAGC
TATGATCAGCATCGCGCGATCCGCTTCCGGCCCGATGCTGCCTTTTTCGCCGGCGAGGCTCCTTTCGAACTCCAGGCCTT
CCATCCCGGCTGGCTCTTCAAGCAGCCGGTGCATCTTCATGTGATCGAGAACGGCGCCGCCACGAGGATGCACATCACAT
CGCAGATGTTCGAGTACCGCCAGCCCTTGTTGGACCCGCAGAAATTTCAAGGCATGGAGTTTCCGGGCGTTGCGGGCTTC
CGGCTGCACTATCCGCTCAACAATCCGGATATCATGGACGAGCTCGTGTCGTTTCTCGGCGCCAGCTACTTTCGGGGGTT
GGGGCGGGGAAGCATCTATGGGATCTCCGCGCGCGGCCTTGCGGTGAATACGGCGACGCCCGTTGGCGAAGAATTTCCGA
TGTTCACCGATTTCTGGATCGAGAAGCCGGAGCGCAGAAGCAAGTCCATCATGGTCTATGCCGCGCTCGATAGCGCCAGC
GTCACGGGAGCATATTCGTTCCAGATCACGCCCGGCCAGAATACGACCATGGAGGTGATCGCGCGGCTCTTCATCCGCAA
CGACATCCAGAGACTGGGCATCGCGCCGATGACCTCGATGTTTCTTTTCAGCCAGAACAATCATCATGCCTTCGACGATT
ACCGGGGTGAGGTGCATGATAGCGAAGGCCTCAAGATCGTGCGGGGCAATGGCGAGGAGCTGTGGCGCCATCTGAACAAC
CCGAAGGAGCTCGCCACGTCCTTTTTCGGCGAAACGGGCGTCAAGGCCTTCGGTCTGTTCCAGCGCGATCGGGACTTCGA
CCACTACCAGGATGCGGAGGCGCATTACGAGCGCCGTCCGTCGCTCCTTGTCGAGCCGCTCGGCGACTGGGGCAAGGGGT
ATCTCAACCTGGTGGAGATCCCGACAGAGCTCGAGGTGAACGACAATATTGTCGCGTTCTGGATGCCGGAAGGGGAGGTG
AAAGCCGGCCAACAGTTCGAATACCGGTATCGCCTCACTTGGGGCGCGATCGAGGAGCCGACGAATCAGCTCGCGCGAGT
GACCGCTTTGCGCGCCGGCATCGGCGGCACTTCCGGCGTGGAAAATGCAGAGGGCCTGAGGAAGTTCGTGGTGGATTTCG
AGGGAGATGTGCTCGGGAACCTAGCCGCGGATTCGAACGTTGAGGCCAGTATTTCTGTGACAAGGGCGGAAATAGTGCAC
AGCGCGGTATCTCGTGTCGAAGCCAATGGCGCATGGCGATTGGTCATCGACCTCATGCCCGAGGGAGACGCGCCGGTGGA
GATGACCGGTTATTTGAGTTTGAACGGCCAGAGGCTATCTGAAACGTGGGCGTATCAGTGGAGAAGAACCGATGAGCAGC
GCTGA

Upstream 100 bases:

>100_bases
TTACGCAGCGTAAGCCTGACTTTCCAACTTCGTAGGTCGATCGCCGCAATTCTGACGAAGACATCCCGGCATTCGCAAAC
TTCACATCGAGAAGGATTTC

Downstream 100 bases:

>100_bases
GGAAAACTTGCGCGCGCATCATATCGTTCAGCAGAGCGCGTTGCCTGCGGCTCCCATGGCGATGCCGGAGCAAGTGTTGT
CGCGGCGCTGGCGCGGCTTT

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MDRRSFIIGGGGALAGMTAFLNNAVALAQDQAETAQLQQSLPGETQPFSFDLLTATMKQKAEKEYQPVEEALPESVTELS
YDQHRAIRFRPDAAFFAGEAPFELQAFHPGWLFKQPVHLHVIENGAATRMHITSQMFEYRQPLLDPQKFQGMEFPGVAGF
RLHYPLNNPDIMDELVSFLGASYFRGLGRGSIYGISARGLAVNTATPVGEEFPMFTDFWIEKPERRSKSIMVYAALDSAS
VTGAYSFQITPGQNTTMEVIARLFIRNDIQRLGIAPMTSMFLFSQNNHHAFDDYRGEVHDSEGLKIVRGNGEELWRHLNN
PKELATSFFGETGVKAFGLFQRDRDFDHYQDAEAHYERRPSLLVEPLGDWGKGYLNLVEIPTELEVNDNIVAFWMPEGEV
KAGQQFEYRYRLTWGAIEEPTNQLARVTALRAGIGGTSGVENAEGLRKFVVDFEGDVLGNLAADSNVEASISVTRAEIVH
SAVSRVEANGAWRLVIDLMPEGDAPVEMTGYLSLNGQRLSETWAYQWRRTDEQR

Sequences:

>Translated_534_residues
MDRRSFIIGGGGALAGMTAFLNNAVALAQDQAETAQLQQSLPGETQPFSFDLLTATMKQKAEKEYQPVEEALPESVTELS
YDQHRAIRFRPDAAFFAGEAPFELQAFHPGWLFKQPVHLHVIENGAATRMHITSQMFEYRQPLLDPQKFQGMEFPGVAGF
RLHYPLNNPDIMDELVSFLGASYFRGLGRGSIYGISARGLAVNTATPVGEEFPMFTDFWIEKPERRSKSIMVYAALDSAS
VTGAYSFQITPGQNTTMEVIARLFIRNDIQRLGIAPMTSMFLFSQNNHHAFDDYRGEVHDSEGLKIVRGNGEELWRHLNN
PKELATSFFGETGVKAFGLFQRDRDFDHYQDAEAHYERRPSLLVEPLGDWGKGYLNLVEIPTELEVNDNIVAFWMPEGEV
KAGQQFEYRYRLTWGAIEEPTNQLARVTALRAGIGGTSGVENAEGLRKFVVDFEGDVLGNLAADSNVEASISVTRAEIVH
SAVSRVEANGAWRLVIDLMPEGDAPVEMTGYLSLNGQRLSETWAYQWRRTDEQR
>Mature_534_residues
MDRRSFIIGGGGALAGMTAFLNNAVALAQDQAETAQLQQSLPGETQPFSFDLLTATMKQKAEKEYQPVEEALPESVTELS
YDQHRAIRFRPDAAFFAGEAPFELQAFHPGWLFKQPVHLHVIENGAATRMHITSQMFEYRQPLLDPQKFQGMEFPGVAGF
RLHYPLNNPDIMDELVSFLGASYFRGLGRGSIYGISARGLAVNTATPVGEEFPMFTDFWIEKPERRSKSIMVYAALDSAS
VTGAYSFQITPGQNTTMEVIARLFIRNDIQRLGIAPMTSMFLFSQNNHHAFDDYRGEVHDSEGLKIVRGNGEELWRHLNN
PKELATSFFGETGVKAFGLFQRDRDFDHYQDAEAHYERRPSLLVEPLGDWGKGYLNLVEIPTELEVNDNIVAFWMPEGEV
KAGQQFEYRYRLTWGAIEEPTNQLARVTALRAGIGGTSGVENAEGLRKFVVDFEGDVLGNLAADSNVEASISVTRAEIVH
SAVSRVEANGAWRLVIDLMPEGDAPVEMTGYLSLNGQRLSETWAYQWRRTDEQR

Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI1787286, Length=487, Percent_Identity=39.8357289527721, Blast_Score=366, Evalue=1e-102,
Organism=Escherichia coli, GI145693128, Length=541, Percent_Identity=38.0776340110906, Blast_Score=338, Evalue=5e-94,

Paralogues:

None

Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 59870; Mature: 59870

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRSFIIGGGGALAGMTAFLNNAVALAQDQAETAQLQQSLPGETQPFSFDLLTATMKQK
CCCCEEEEECCHHHHHHHHHHHCHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AEKEYQPVEEALPESVTELSYDQHRAIRFRPDAAFFAGEAPFELQAFHPGWLFKQPVHLH
HHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCEEEEECCCCCCCCCEEEE
VIENGAATRMHITSQMFEYRQPLLDPQKFQGMEFPGVAGFRLHYPLNNPDIMDELVSFLG
EEECCCCEEEHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
ASYFRGLGRGSIYGISARGLAVNTATPVGEEFPMFTDFWIEKPERRSKSIMVYAALDSAS
HHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCC
VTGAYSFQITPGQNTTMEVIARLFIRNDIQRLGIAPMTSMFLFSQNNHHAFDDYRGEVHD
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCC
SEGLKIVRGNGEELWRHLNNPKELATSFFGETGVKAFGLFQRDRDFDHYQDAEAHYERRP
CCCCEEEECCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHCCHHHHHHCCC
SLLVEPLGDWGKGYLNLVEIPTELEVNDNIVAFWMPEGEVKAGQQFEYRYRLTWGAIEEP
CEEEECCCCCCCCCEEEEECCCEEEECCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCH
TNQLARVTALRAGIGGTSGVENAEGLRKFVVDFEGDVLGNLAADSNVEASISVTRAEIVH
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEEHHHHHHHH
SAVSRVEANGAWRLVIDLMPEGDAPVEMTGYLSLNGQRLSETWAYQWRRTDEQR
HHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDRRSFIIGGGGALAGMTAFLNNAVALAQDQAETAQLQQSLPGETQPFSFDLLTATMKQK
CCCCEEEEECCHHHHHHHHHHHCHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AEKEYQPVEEALPESVTELSYDQHRAIRFRPDAAFFAGEAPFELQAFHPGWLFKQPVHLH
HHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCCCCCEEEEECCCCCCCCCEEEE
VIENGAATRMHITSQMFEYRQPLLDPQKFQGMEFPGVAGFRLHYPLNNPDIMDELVSFLG
EEECCCCEEEHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHH
ASYFRGLGRGSIYGISARGLAVNTATPVGEEFPMFTDFWIEKPERRSKSIMVYAALDSAS
HHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCC
VTGAYSFQITPGQNTTMEVIARLFIRNDIQRLGIAPMTSMFLFSQNNHHAFDDYRGEVHD
CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCC
SEGLKIVRGNGEELWRHLNNPKELATSFFGETGVKAFGLFQRDRDFDHYQDAEAHYERRP
CCCCEEEECCHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHCCHHHHHHCCC
SLLVEPLGDWGKGYLNLVEIPTELEVNDNIVAFWMPEGEVKAGQQFEYRYRLTWGAIEEP
CEEEECCCCCCCCCEEEEECCCEEEECCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCH
TNQLARVTALRAGIGGTSGVENAEGLRKFVVDFEGDVLGNLAADSNVEASISVTRAEIVH
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCEEEEHHHHHHHH
SAVSRVEANGAWRLVIDLMPEGDAPVEMTGYLSLNGQRLSETWAYQWRRTDEQR
HHHHHHCCCCCEEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12027885 [H]