| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is yeiH [C]
Identifier: 110635301
GI number: 110635301
Start: 3231797
End: 3232816
Strand: Reverse
Name: yeiH [C]
Synonym: Meso_2972
Alternate gene names: 110635301
Gene position: 3232816-3231797 (Counterclockwise)
Preceding gene: 110635305
Following gene: 110635297
Centisome position: 73.27
GC content: 54.9
Gene sequence:
>1020_bases ATGTCTATACTTAAAAATAGCCGCCGACTTTTTCCGGGCGTTATTTTGTCCGCAGCGGTCGCCGGCCTGGCCCTCGCTAT GGAGCACGCAGAGTTCATGGTGTTCCATGTGCGGTGGGTCGAGAGCATTGTGCTTGCCATCGCCATCGGGATCTTTATCG CAACCTGGCGCCCGATCGAAGCTCGCTTCAGACCAGGCATCGAGTTCAGCGCCAAAGGTCTGCTGGAGGCTGCAATCGTT CTTATCGGGGCTTCGATAAGTTATTCGGCCATTCGCGATGCAGGTGTGGAGCTGGTGGTTGGCGTGGCAAGCATTGTATT CTTGTCGATTGCTGCCACCTACTTGATAGGTCGGCTGCTTGGCCTTTCGGCAAAGCTTGCGATCCTTATTGCCTGCGGTA ATTCGATCTGCGGCAACTCCGCCATCGTCGCTGTTGCGCCTGTCATCGAAGCGCCAGCTAAAGATGTTGCTGCAGCGCTT GCGTTCACCGCAGGTTTGGGCATTCTTGCGATTTTCCTGCTGCCCCTACTTTATTATCACCTTGAGCTGACCCTCGCTCA ATATGGCGTTGTCGCAGGTATAACAGCGTATGCGGTACCTCAGGTTCTTGCCGCTACCGCGCCCGTCGGGGCCGTTAGCG TTCAAATCGGGACACTCGTGAAGCTCATCCGCGTGTTGATGTTAGGCCCTGTCGTATTCGCACTGAACTCTGCAATGAAA GTGCGAGTTGGCGGTCAAAAGGGTGAAGCAACCAGACCCCTGGTCCCTTGGTTCATTTTGGGGTTCTTCGGGATGGTTGC ACTTCGATCCTCTGGCCTTGTGTCAACCGCACAGGCAGAGATCTTGGCCCAAATCGCCAGCATATTGACAACCTTGGCTA TGGCTGCGCTTGGGCTTTCCGTGAATGTCAGGTCCTTTTTCCACGCCGGTGGACGAGTCATGTTGGCTGCAACATGCTCC GTAGTATTGCTCGCCCTGATGGGGTTTGTGCTCGTCTCATTCCTTGTACCTTTACCCTAG
Upstream 100 bases:
>100_bases TCATTCTATTTTTCCGAACGTTGTATGGATTTTTTTTCGATGGATGTGGTCAACGTTAGGTGACAGGTTCCATCATCGAT CATGCCGATGATGAGCTATA
Downstream 100 bases:
>100_bases GAGCCGTTCTTGCCTTGGAAAGGTTCGCCGGCTTCACGGAATTCTATAACGCCTGCCGCGATTAACTTCTCGATTTGATC GTCTTCCCACCCGAGCACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSILKNSRRLFPGVILSAAVAGLALAMEHAEFMVFHVRWVESIVLAIAIGIFIATWRPIEARFRPGIEFSAKGLLEAAIV LIGASISYSAIRDAGVELVVGVASIVFLSIAATYLIGRLLGLSAKLAILIACGNSICGNSAIVAVAPVIEAPAKDVAAAL AFTAGLGILAIFLLPLLYYHLELTLAQYGVVAGITAYAVPQVLAATAPVGAVSVQIGTLVKLIRVLMLGPVVFALNSAMK VRVGGQKGEATRPLVPWFILGFFGMVALRSSGLVSTAQAEILAQIASILTTLAMAALGLSVNVRSFFHAGGRVMLAATCS VVLLALMGFVLVSFLVPLP
Sequences:
>Translated_339_residues MSILKNSRRLFPGVILSAAVAGLALAMEHAEFMVFHVRWVESIVLAIAIGIFIATWRPIEARFRPGIEFSAKGLLEAAIV LIGASISYSAIRDAGVELVVGVASIVFLSIAATYLIGRLLGLSAKLAILIACGNSICGNSAIVAVAPVIEAPAKDVAAAL AFTAGLGILAIFLLPLLYYHLELTLAQYGVVAGITAYAVPQVLAATAPVGAVSVQIGTLVKLIRVLMLGPVVFALNSAMK VRVGGQKGEATRPLVPWFILGFFGMVALRSSGLVSTAQAEILAQIASILTTLAMAALGLSVNVRSFFHAGGRVMLAATCS VVLLALMGFVLVSFLVPLP >Mature_338_residues SILKNSRRLFPGVILSAAVAGLALAMEHAEFMVFHVRWVESIVLAIAIGIFIATWRPIEARFRPGIEFSAKGLLEAAIVL IGASISYSAIRDAGVELVVGVASIVFLSIAATYLIGRLLGLSAKLAILIACGNSICGNSAIVAVAPVIEAPAKDVAAALA FTAGLGILAIFLLPLLYYHLELTLAQYGVVAGITAYAVPQVLAATAPVGAVSVQIGTLVKLIRVLMLGPVVFALNSAMKV RVGGQKGEATRPLVPWFILGFFGMVALRSSGLVSTAQAEILAQIASILTTLAMAALGLSVNVRSFFHAGGRVMLAATCSV VLLALMGFVLVSFLVPLP
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=331, Percent_Identity=29.3051359516616, Blast_Score=118, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 35189; Mature: 35058
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILKNSRRLFPGVILSAAVAGLALAMEHAEFMVFHVRWVESIVLAIAIGIFIATWRPIE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ARFRPGIEFSAKGLLEAAIVLIGASISYSAIRDAGVELVVGVASIVFLSIAATYLIGRLL HHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GLSAKLAILIACGNSICGNSAIVAVAPVIEAPAKDVAAALAFTAGLGILAIFLLPLLYYH CCHHHHEEEEEECCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELTLAQYGVVAGITAYAVPQVLAATAPVGAVSVQIGTLVKLIRVLMLGPVVFALNSAMK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VRVGGQKGEATRPLVPWFILGFFGMVALRSSGLVSTAQAEILAQIASILTTLAMAALGLS EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VNVRSFFHAGGRVMLAATCSVVLLALMGFVLVSFLVPLP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SILKNSRRLFPGVILSAAVAGLALAMEHAEFMVFHVRWVESIVLAIAIGIFIATWRPIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ARFRPGIEFSAKGLLEAAIVLIGASISYSAIRDAGVELVVGVASIVFLSIAATYLIGRLL HHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GLSAKLAILIACGNSICGNSAIVAVAPVIEAPAKDVAAALAFTAGLGILAIFLLPLLYYH CCHHHHEEEEEECCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LELTLAQYGVVAGITAYAVPQVLAATAPVGAVSVQIGTLVKLIRVLMLGPVVFALNSAMK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VRVGGQKGEATRPLVPWFILGFFGMVALRSSGLVSTAQAEILAQIASILTTLAMAALGLS EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VNVRSFFHAGGRVMLAATCSVVLLALMGFVLVSFLVPLP HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA