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The map label for this gene is asnB [H]

Identifier: 110635217

GI number: 110635217

Start: 3136878

End: 3138818

Strand: Reverse

Name: asnB [H]

Synonym: Meso_2884

Alternate gene names: 110635217

Gene position: 3138818-3136878 (Counterclockwise)

Preceding gene: 110635218

Following gene: 110635216

Centisome position: 71.14

GC content: 64.81

Gene sequence:

>1941_bases
TTGTGCGGGTTCGGCGGATATTTCGGCGCGGGCGTTTCTGAGGCGGAACCGCTTTTGCGGCGGATGGCCTCGGCCATCGC
CCATCGCGGGCCGGACGAGCGCGGCACCGCCGTACTCGATGGTGCGGGCCTTTGCCATACGCGCCTTTCCATCGTCGGTC
TTGCCGACGGCCAGCAGCCTATGTCTCTTGATGGCGGCAGGCTCACCATCGCCTTCAACGGCGAGATCTTCAATTACGTG
GAATTGCGCGAGGCGCTGATCGCCCGCGGCCGCACCTTCCGCACTGCGAGCGACACGGAAGTCATCCTCCATCTCTATGA
CGAGAAGGGACCGGACTGCCTTGCCGACCTGAACGGCGATTTCGCTTTCGCCATCTGGGATGCGCCACGCCGCCGCATGT
TTCTTGCACGCGACCGCATGGGCGTGCGTCCGCTCTTCTATACGAGCGTGGGCGACCGGCTCTTCTTCGCTTCGGAAGTC
AAAACGCTCCTGCAGGTGCCGGGTGTCGAGGCGGAGATGGATCCGTTCGCGCTCGACCAGATGTTCACGCTCTGGGCGCC
CATAGCTCCCCGCACCGCCTTCAAGAACATTCACGAGCTTGAGCCCGGGCACATGATGCTCGTCGAGGAAGGGCGCCAGG
CGATCCGGCCCTACTGGTCGCTTTCTTTCCCGGAACATGGCGCGCCCAGCCGCCACACGGATGAGCGCGCCGTGGCGGAA
GAGCTGCGGGCACTGCTCACCGACGCGACACGGCTGCGCATGCGCGCCGACGTGCCGGTTGGCTCCTATCTTTCGGGCGG
CCTCGACTCCTCCGTGATCTCGGCGCTGGCGGCCGGCATGACGCCGGAGATCCTGCGCACCTTCTCCGTTGCGTTCGAAA
GCGCCGAGCACGATGAGAGTGCCTTCCAAAACGAGGTGGCGGCAGCACTTGGCACAATGCATGCCTCCGTCAATTGCGGC
GACGGTGACATCGCCGCGGTTTTCCCCGATGTGATCCGTTTTACCGAAAGGCCGATCCTGCGCACCGCGCCCGCCCCGCT
CTTCAAGCTTTCGGCGCTGGTGCGCGAAAGGGGCCTGAAAGTGGTGCTCACGGGCGAGGGGGCCGACGAGGTCTTCGCCG
GCTACGACATCTTCAAGGAGGCGCGGGTGCGCCGCTTCTGCGCGCGCCAGCCCGGCTCGCGCATGCGTCCGCATCTCTTC
CGCAAGCTCTACCCTTATCTGCCCGGGCTCAAGCAGCAATCGGCCGAATATCTCGCCGCCTTTTTCGGTGCGGGCGCGGA
TTCGCTCGATGATCCGCTCTTCTCGCACAAGCCCCGCATGCGCGCGACGGGTGCGGCCAAGCTCTTCTTCTCCGCCCAGC
TGCGCGAGACATTGGCCGGTTACGATGCGGCGGAGGAGCTTGCCTCACGCCTGCCGCAGGAGTTTCCCCGCTGGCATCCG
CTGCATCAGGCGCAATATCTGGAGTCCCGCTTCCTGCTCCCCGGCTACATCCTTTCCAGCCAGGGCGACCGCATGGCCAT
GGCACACGGCATCGAAGGGCGCTTCCCCTTCCTCGATCACCGGCTGGTTGAGTTCGCCACCACCCTGCCGCCGGAGATGA
AGCTGAAGGGCCTGGTCGAAAAGCACATTCTGCGCGAGGCGACCAAGGGCCTCCTCCCGGAATCGATCCTGCGCCGCACC
AAGCAGCCATACCGTGCGCCCGACAGCGCCTCATTCCGCGGAGCGGGCGAGAAGGACTATGTCCGCGAGGCGATGAGTGC
GGAAAAACTTGCCGACTGCGGACTTTTCAACCCGGCATCCGTGTCCAAACTCTTCGCCAAGAGCCGTCAGCAGCCGCTTT
CCGGCTTTCGCGACAATGCCGCTTTTGTCGGCATCCTTTCGTCCCAGCTATGGCTGGAGACCTTCACCGGTTCACGCATT
CGCGCCGTCGAGGCGGCATAA

Upstream 100 bases:

>100_bases
GGCACATTCTTTGAATGCATGCTATGGGAGTTGCCAGTTGGCAGCCCCGGTCGAGGCTCGTGCGTCCTCGGCCCGGTAGC
AGAATGGGGGCATTTGGAGT

Downstream 100 bases:

>100_bases
TTGGAGATTGGAATGGCAGGCAGCATCAAGGATCAGGTCAGGGCCTTCATCGTCGAGAATTTCCTGTTCGGAGACACCTC
CGCCCAGATCGATGATGACG

Product: asparagine synthase (glutamine-hydrolyzing)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MCGFGGYFGAGVSEAEPLLRRMASAIAHRGPDERGTAVLDGAGLCHTRLSIVGLADGQQPMSLDGGRLTIAFNGEIFNYV
ELREALIARGRTFRTASDTEVILHLYDEKGPDCLADLNGDFAFAIWDAPRRRMFLARDRMGVRPLFYTSVGDRLFFASEV
KTLLQVPGVEAEMDPFALDQMFTLWAPIAPRTAFKNIHELEPGHMMLVEEGRQAIRPYWSLSFPEHGAPSRHTDERAVAE
ELRALLTDATRLRMRADVPVGSYLSGGLDSSVISALAAGMTPEILRTFSVAFESAEHDESAFQNEVAAALGTMHASVNCG
DGDIAAVFPDVIRFTERPILRTAPAPLFKLSALVRERGLKVVLTGEGADEVFAGYDIFKEARVRRFCARQPGSRMRPHLF
RKLYPYLPGLKQQSAEYLAAFFGAGADSLDDPLFSHKPRMRATGAAKLFFSAQLRETLAGYDAAEELASRLPQEFPRWHP
LHQAQYLESRFLLPGYILSSQGDRMAMAHGIEGRFPFLDHRLVEFATTLPPEMKLKGLVEKHILREATKGLLPESILRRT
KQPYRAPDSASFRGAGEKDYVREAMSAEKLADCGLFNPASVSKLFAKSRQQPLSGFRDNAAFVGILSSQLWLETFTGSRI
RAVEAA

Sequences:

>Translated_646_residues
MCGFGGYFGAGVSEAEPLLRRMASAIAHRGPDERGTAVLDGAGLCHTRLSIVGLADGQQPMSLDGGRLTIAFNGEIFNYV
ELREALIARGRTFRTASDTEVILHLYDEKGPDCLADLNGDFAFAIWDAPRRRMFLARDRMGVRPLFYTSVGDRLFFASEV
KTLLQVPGVEAEMDPFALDQMFTLWAPIAPRTAFKNIHELEPGHMMLVEEGRQAIRPYWSLSFPEHGAPSRHTDERAVAE
ELRALLTDATRLRMRADVPVGSYLSGGLDSSVISALAAGMTPEILRTFSVAFESAEHDESAFQNEVAAALGTMHASVNCG
DGDIAAVFPDVIRFTERPILRTAPAPLFKLSALVRERGLKVVLTGEGADEVFAGYDIFKEARVRRFCARQPGSRMRPHLF
RKLYPYLPGLKQQSAEYLAAFFGAGADSLDDPLFSHKPRMRATGAAKLFFSAQLRETLAGYDAAEELASRLPQEFPRWHP
LHQAQYLESRFLLPGYILSSQGDRMAMAHGIEGRFPFLDHRLVEFATTLPPEMKLKGLVEKHILREATKGLLPESILRRT
KQPYRAPDSASFRGAGEKDYVREAMSAEKLADCGLFNPASVSKLFAKSRQQPLSGFRDNAAFVGILSSQLWLETFTGSRI
RAVEAA
>Mature_646_residues
MCGFGGYFGAGVSEAEPLLRRMASAIAHRGPDERGTAVLDGAGLCHTRLSIVGLADGQQPMSLDGGRLTIAFNGEIFNYV
ELREALIARGRTFRTASDTEVILHLYDEKGPDCLADLNGDFAFAIWDAPRRRMFLARDRMGVRPLFYTSVGDRLFFASEV
KTLLQVPGVEAEMDPFALDQMFTLWAPIAPRTAFKNIHELEPGHMMLVEEGRQAIRPYWSLSFPEHGAPSRHTDERAVAE
ELRALLTDATRLRMRADVPVGSYLSGGLDSSVISALAAGMTPEILRTFSVAFESAEHDESAFQNEVAAALGTMHASVNCG
DGDIAAVFPDVIRFTERPILRTAPAPLFKLSALVRERGLKVVLTGEGADEVFAGYDIFKEARVRRFCARQPGSRMRPHLF
RKLYPYLPGLKQQSAEYLAAFFGAGADSLDDPLFSHKPRMRATGAAKLFFSAQLRETLAGYDAAEELASRLPQEFPRWHP
LHQAQYLESRFLLPGYILSSQGDRMAMAHGIEGRFPFLDHRLVEFATTLPPEMKLKGLVEKHILREATKGLLPESILRRT
KQPYRAPDSASFRGAGEKDYVREAMSAEKLADCGLFNPASVSKLFAKSRQQPLSGFRDNAAFVGILSSQLWLETFTGSRI
RAVEAA

Specific function: Main asparagine synthetase in vegetative cells [H]

COG id: COG0367

COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Homo sapiens, GI168229248, Length=408, Percent_Identity=28.1862745098039, Blast_Score=123, Evalue=7e-28,
Organism=Homo sapiens, GI168229252, Length=408, Percent_Identity=28.1862745098039, Blast_Score=123, Evalue=7e-28,
Organism=Homo sapiens, GI168229250, Length=408, Percent_Identity=28.1862745098039, Blast_Score=123, Evalue=7e-28,
Organism=Homo sapiens, GI296010848, Length=383, Percent_Identity=28.1984334203655, Blast_Score=116, Evalue=7e-26,
Organism=Escherichia coli, GI1786889, Length=403, Percent_Identity=33.4987593052109, Blast_Score=180, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI25147557, Length=384, Percent_Identity=29.6875, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI71993933, Length=376, Percent_Identity=29.2553191489362, Blast_Score=121, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI25147560, Length=305, Percent_Identity=28.5245901639344, Blast_Score=89, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6321563, Length=420, Percent_Identity=30.7142857142857, Blast_Score=164, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6325403, Length=421, Percent_Identity=29.9287410926366, Blast_Score=150, Evalue=5e-37,
Organism=Drosophila melanogaster, GI45553209, Length=374, Percent_Identity=30.7486631016043, Blast_Score=151, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006426
- InterPro:   IPR001962
- InterPro:   IPR017932
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00733 Asn_synthase [H]

EC number: =6.3.5.4 [H]

Molecular weight: Translated: 71439; Mature: 71439

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGFGGYFGAGVSEAEPLLRRMASAIAHRGPDERGTAVLDGAGLCHTRLSIVGLADGQQP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHEEEEEECCCCCC
MSLDGGRLTIAFNGEIFNYVELREALIARGRTFRTASDTEVILHLYDEKGPDCLADLNGD
CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCHHHCCCCC
FAFAIWDAPRRRMFLARDRMGVRPLFYTSVGDRLFFASEVKTLLQVPGVEAEMDPFALDQ
EEEEEECCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
MFTLWAPIAPRTAFKNIHELEPGHMMLVEEGRQAIRPYWSLSFPEHGAPSRHTDERAVAE
HHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
ELRALLTDATRLRMRADVPVGSYLSGGLDSSVISALAAGMTPEILRTFSVAFESAEHDES
HHHHHHHHHHHHHEEECCCCCHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
AFQNEVAAALGTMHASVNCGDGDIAAVFPDVIRFTERPILRTAPAPLFKLSALVRERGLK
HHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCE
VVLTGEGADEVFAGYDIFKEARVRRFCARQPGSRMRPHLFRKLYPYLPGLKQQSAEYLAA
EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
FFGAGADSLDDPLFSHKPRMRATGAAKLFFSAQLRETLAGYDAAEELASRLPQEFPRWHP
HHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCCC
LHQAQYLESRFLLPGYILSSQGDRMAMAHGIEGRFPFLDHRLVEFATTLPPEMKLKGLVE
CHHHHHHHHCCCCCCEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
KHILREATKGLLPESILRRTKQPYRAPDSASFRGAGEKDYVREAMSAEKLADCGLFNPAS
HHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
VSKLFAKSRQQPLSGFRDNAAFVGILSSQLWLETFTGSRIRAVEAA
HHHHHHHHHCCHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MCGFGGYFGAGVSEAEPLLRRMASAIAHRGPDERGTAVLDGAGLCHTRLSIVGLADGQQP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHEEEEEECCCCCC
MSLDGGRLTIAFNGEIFNYVELREALIARGRTFRTASDTEVILHLYDEKGPDCLADLNGD
CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCHHHCCCCC
FAFAIWDAPRRRMFLARDRMGVRPLFYTSVGDRLFFASEVKTLLQVPGVEAEMDPFALDQ
EEEEEECCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
MFTLWAPIAPRTAFKNIHELEPGHMMLVEEGRQAIRPYWSLSFPEHGAPSRHTDERAVAE
HHHHHCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH
ELRALLTDATRLRMRADVPVGSYLSGGLDSSVISALAAGMTPEILRTFSVAFESAEHDES
HHHHHHHHHHHHHEEECCCCCHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHH
AFQNEVAAALGTMHASVNCGDGDIAAVFPDVIRFTERPILRTAPAPLFKLSALVRERGLK
HHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHCCCE
VVLTGEGADEVFAGYDIFKEARVRRFCARQPGSRMRPHLFRKLYPYLPGLKQQSAEYLAA
EEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
FFGAGADSLDDPLFSHKPRMRATGAAKLFFSAQLRETLAGYDAAEELASRLPQEFPRWHP
HHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCCC
LHQAQYLESRFLLPGYILSSQGDRMAMAHGIEGRFPFLDHRLVEFATTLPPEMKLKGLVE
CHHHHHHHHCCCCCCEEECCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
KHILREATKGLLPESILRRTKQPYRAPDSASFRGAGEKDYVREAMSAEKLADCGLFNPAS
HHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHH
VSKLFAKSRQQPLSGFRDNAAFVGILSSQLWLETFTGSRIRAVEAA
HHHHHHHHHCCHHHCCCCCCEEEEHHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377; 8755891; 10498721 [H]