| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110635216
Identifier: 110635216
GI number: 110635216
Start: 3136596
End: 3136865
Strand: Reverse
Name: 110635216
Synonym: Meso_2883
Alternate gene names: NA
Gene position: 3136865-3136596 (Counterclockwise)
Preceding gene: 110635217
Following gene: 110635215
Centisome position: 71.09
GC content: 55.19
Gene sequence:
>270_bases ATGGCAGGCAGCATCAAGGATCAGGTCAGGGCCTTCATCGTCGAGAATTTCCTGTTCGGAGACACCTCCGCCCAGATCGA TGATGACGCATCTCTCATCGAGAACGATGTCATCGATTCTACCGGGGTGCTGGAATTGGTCGCTTTTATCGAGGAGCGCT TCGGCGTGACTATGGCGGACGCCGAGATCGTTCCCGCCAATCTCGATTCCCTTGACCGTATCACAGCCTTCGTCAGCACG AAGACTGGCAAGGAATCGCTTAACGCCTGA
Upstream 100 bases:
>100_bases CAATGCCGCTTTTGTCGGCATCCTTTCGTCCCAGCTATGGCTGGAGACCTTCACCGGTTCACGCATTCGCGCCGTCGAGG CGGCATAATTGGAGATTGGA
Downstream 100 bases:
>100_bases GCGGAAGGCTGGAGGCCGGGATGCGTGTCGAAGAATTCCTGCGGGGCAGCGCCTCGCGCTACGGGGAAAAGACCGCTCTC GTGAGCGGGTCCACGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MAGSIKDQVRAFIVENFLFGDTSAQIDDDASLIENDVIDSTGVLELVAFIEERFGVTMADAEIVPANLDSLDRITAFVST KTGKESLNA
Sequences:
>Translated_89_residues MAGSIKDQVRAFIVENFLFGDTSAQIDDDASLIENDVIDSTGVLELVAFIEERFGVTMADAEIVPANLDSLDRITAFVST KTGKESLNA >Mature_88_residues AGSIKDQVRAFIVENFLFGDTSAQIDDDASLIENDVIDSTGVLELVAFIEERFGVTMADAEIVPANLDSLDRITAFVSTK TGKESLNA
Specific function: Unknown
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9584; Mature: 9453
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSIKDQVRAFIVENFLFGDTSAQIDDDASLIENDVIDSTGVLELVAFIEERFGVTMAD CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCEECC AEIVPANLDSLDRITAFVSTKTGKESLNA CEECCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AGSIKDQVRAFIVENFLFGDTSAQIDDDASLIENDVIDSTGVLELVAFIEERFGVTMAD CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCEECC AEIVPANLDSLDRITAFVSTKTGKESLNA CEECCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA