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The map label for this gene is ylbA [H]

Identifier: 110635163

GI number: 110635163

Start: 3076461

End: 3077303

Strand: Reverse

Name: ylbA [H]

Synonym: Meso_2830

Alternate gene names: 110635163

Gene position: 3077303-3076461 (Counterclockwise)

Preceding gene: 110635164

Following gene: 110635162

Centisome position: 69.74

GC content: 61.57

Gene sequence:

>843_bases
ATGACCAGAAACTATTACGCGCCCACGGGCGGACACCCGCCACAAACGGATCTTCTTACCGGGAGGGCCGTCTTCACCGA
AGCCTATGCGGTGATTCCCAAGGGGGTGATGCGCGATATCGTCACCAGCGTCCTGCCACTTTGGGAAAAGACGCGGGCCT
GGATCATCGCGCGGCCGCTCTCGGGATTTGCCGAGACCTTCTCGCAATACATCATGGAAGTGCAGCCGGGCGGCGGCAGC
GAAAAGCCTGAGCCGGACCTTGAGGCAGAGGCAGTCCTTTTCGTCGTCGAAGGCGAATTAACGGTGGAACTGGATGGCCG
GAAGCATCGGATGGAGCCGGGCGGCTACGCGTTCCTGCCGCCTGAAAGCCGCTGGACGGCCCGAAACGAGAGTTCCGCAC
CTGTGCGCTTCCACTGGATTCGCAAGTCTTATGAGAGCGTAGACGGGGTTCCTGTGCCGGAGGCGTTCTTCGTCAACGAG
AAGGATATCGCGCCGACGGCGATGCCGGGCACCGAGGGAAAATGGGCCACGACGCGCTTCGTCGACCCGGAGGACGTGCG
GCACGACATGCATGTGACGATCGTGACGTTCGAGCCGGGCGCGGTAATCCCCTTCGCGGAGACGCACGTCATGGAGCACG
GGCTCTATGTGCTCGAAGGCAAGGCGGTCTACCGGCTCAACCAGGATTGGGTGGAAGTGGAGGCGGGAGATTTCATGTGG
CTCAGGGCATTCTGCCCACAGGCATGCTACGCTGGCGGCCCCGGCAAGTTCCGCTATCTGCTCTACAAGGATGTAAACAG
GCACGCAGCGCTGAAACCGCTGTGGCGGAGAGTGGATAAATGA

Upstream 100 bases:

>100_bases
TCGAGACACGTATCGAAAAGGGCCCGGAAGAGGAGTTCGCTACGGCCTGCGGCCAGGTGGAGCGGATCGCTTATCTGAGG
CTCAAGGACATCCTGCCGTC

Downstream 100 bases:

>100_bases
GGAAAATCATCGCCGAACCTTTGACGAAAGATGCGTTTGCGCCATTCGGCGACGTGATCGAGGCGGAGGAGGGGACCAGC
TTCCCGATCAACAACGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTRNYYAPTGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSVLPLWEKTRAWIIARPLSGFAETFSQYIMEVQPGGGS
EKPEPDLEAEAVLFVVEGELTVELDGRKHRMEPGGYAFLPPESRWTARNESSAPVRFHWIRKSYESVDGVPVPEAFFVNE
KDIAPTAMPGTEGKWATTRFVDPEDVRHDMHVTIVTFEPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMW
LRAFCPQACYAGGPGKFRYLLYKDVNRHAALKPLWRRVDK

Sequences:

>Translated_280_residues
MTRNYYAPTGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSVLPLWEKTRAWIIARPLSGFAETFSQYIMEVQPGGGS
EKPEPDLEAEAVLFVVEGELTVELDGRKHRMEPGGYAFLPPESRWTARNESSAPVRFHWIRKSYESVDGVPVPEAFFVNE
KDIAPTAMPGTEGKWATTRFVDPEDVRHDMHVTIVTFEPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMW
LRAFCPQACYAGGPGKFRYLLYKDVNRHAALKPLWRRVDK
>Mature_279_residues
TRNYYAPTGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSVLPLWEKTRAWIIARPLSGFAETFSQYIMEVQPGGGSE
KPEPDLEAEAVLFVVEGELTVELDGRKHRMEPGGYAFLPPESRWTARNESSAPVRFHWIRKSYESVDGVPVPEAFFVNEK
DIAPTAMPGTEGKWATTRFVDPEDVRHDMHVTIVTFEPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWL
RAFCPQACYAGGPGKFRYLLYKDVNRHAALKPLWRRVDK

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=254, Percent_Identity=30.3149606299213, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 31657; Mature: 31526

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNYYAPTGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSVLPLWEKTRAWIIARPL
CCCCCCCCCCCCCCCCHHEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCH
SGFAETFSQYIMEVQPGGGSEKPEPDLEAEAVLFVVEGELTVELDGRKHRMEPGGYAFLP
HHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEEECEEEEEECCCEECCCCCCEEECC
PESRWTARNESSAPVRFHWIRKSYESVDGVPVPEAFFVNEKDIAPTAMPGTEGKWATTRF
CCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEC
VDPEDVRHDMHVTIVTFEPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMW
CCHHHHCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEEE
LRAFCPQACYAGGPGKFRYLLYKDVNRHAALKPLWRRVDK
EHHHCCHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRNYYAPTGGHPPQTDLLTGRAVFTEAYAVIPKGVMRDIVTSVLPLWEKTRAWIIARPL
CCCCCCCCCCCCCCCHHEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCH
SGFAETFSQYIMEVQPGGGSEKPEPDLEAEAVLFVVEGELTVELDGRKHRMEPGGYAFLP
HHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEEECEEEEEECCCEECCCCCCEEECC
PESRWTARNESSAPVRFHWIRKSYESVDGVPVPEAFFVNEKDIAPTAMPGTEGKWATTRF
CCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEC
VDPEDVRHDMHVTIVTFEPGAVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMW
CCHHHHCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEECCEEEEECCCEEEEECCCEEE
LRAFCPQACYAGGPGKFRYLLYKDVNRHAALKPLWRRVDK
EHHHCCHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]