| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is wcaL [C]
Identifier: 110635022
GI number: 110635022
Start: 2920808
End: 2921914
Strand: Reverse
Name: wcaL [C]
Synonym: Meso_2688
Alternate gene names: 110635022
Gene position: 2921914-2920808 (Counterclockwise)
Preceding gene: 110635023
Following gene: 110635013
Centisome position: 66.22
GC content: 61.61
Gene sequence:
>1107_bases ATGGCTCTGACGATTCTCAGCGTTGCCTATCCATTCGCGGCGATCGGGCCGGACGCGGTGGGCGGCGCTGAGCAGGTGCT TTCCGCGCTCGATCGCGCGATGGTGCGAAACGGTCATCGCTCCATCGTGATCGCTTGCGAAGGATCAAAAACGGCGGGGG AACTGGTGCCCCTGGCTGCGCAGGGAGGCAGGATCGACGATTCCGTTCGGCACAGGGTTTGGGGGGAGGTGCGCCAGCTA ATCGGCGAGGTTCTGATGCGGGAGCGGGTGGATCTGGTGCACCTACATGGGCTCGATTTCCACGCTTACCTCCCGGAAAG TGCGCTCACAGTGGCAACGCTGCACCTGCCGCTGGACTGGTATCCCGGCTGGATCTTCGAAAGCCGCGCCAATCTCTTTC TCCACTGCGTTTCGGAAATTCAGCACCGCACCGCGCCGGTAGGCGCCCCGCTGCTGCCGCCGATCCCGAATGGGGTTCCG CTTGAGCTTTTCCTCACGCGACAGCGCAAGCGCGATCACGCAATCGTCCTCAGCCGGATTTGCCCGGAAAAGGGAATCCA CATGGCAATCCAAGCCTGCCGGCTTGCCGATGCAGCTCTTCTGATAGGCGGTCAGGTGTTTCCTTACGAGGCGCATGAGC GCTATTTCAAAGAGGAGCTTGCGCCTTTTCTGGATTCGCGGCGGCGGTTCCTTGGACCACTCGTTTTCAACCGAAAGCGA CGGCTCCTTGCGTCTGCCCGATGCGCGCTTGTGCCCAGCCTGGTGGCGGAAACAAGCTCGCTCACGGCAATGGAAGCGCT CGCCTGCGGCACGCCTGTAATCGCCTTTGAGAACGGCGCGTTGCCAGGCGTGGTCGAGAATGGACGCACCGGTTTTCTCG TCAAGAATGTTTCAGAGATGGCAGAGGCGATCATGGCTGCATCATCCCTCGATCCCCAGGTCTGCCGGGACGCGGCTTGG CAGCTCTTTTCACCGCAGCGGATGGAGCAGCGCTATCTCGATCTCTATCAGGGGCTTGCAGGCATGGCGCGACCAAGGCA GTCCAGCGCGGAATTCGCCGCCGGTACGATCAAGCAGCAAGCGCAAGCCCACCCATCTTTTCGATGA
Upstream 100 bases:
>100_bases TGCCGAACGAAGTGCTTTACGCTCAACGTGACTGGGGGCTGAGACCCTCCGACTGGCCGAATTTGGTCGAACAGGCAAGC AGGGAACTCGATCTTCCCCG
Downstream 100 bases:
>100_bases ACGCGACGACCTCTTCCGCACCTTGACGGCGGGACAGATCGGTCATGACATAGGGCCGGCCCTCACGCACTTTCTCCGTA TCGCTCCTCATCACGTCGAG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Sugar Transferase; Glycosyl Transferase Group 1 Protein; Group 1 Glycosyl Transferase Protein; Mannose-6-Phosphate Isomerase Bifunctional; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyltransferase Protein; Galactosyltransferase; UDP-Glycosyltransferase/Glycogen Phosphorylase; Glycogen Synthase
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MALTILSVAYPFAAIGPDAVGGAEQVLSALDRAMVRNGHRSIVIACEGSKTAGELVPLAAQGGRIDDSVRHRVWGEVRQL IGEVLMRERVDLVHLHGLDFHAYLPESALTVATLHLPLDWYPGWIFESRANLFLHCVSEIQHRTAPVGAPLLPPIPNGVP LELFLTRQRKRDHAIVLSRICPEKGIHMAIQACRLADAALLIGGQVFPYEAHERYFKEELAPFLDSRRRFLGPLVFNRKR RLLASARCALVPSLVAETSSLTAMEALACGTPVIAFENGALPGVVENGRTGFLVKNVSEMAEAIMAASSLDPQVCRDAAW QLFSPQRMEQRYLDLYQGLAGMARPRQSSAEFAAGTIKQQAQAHPSFR
Sequences:
>Translated_368_residues MALTILSVAYPFAAIGPDAVGGAEQVLSALDRAMVRNGHRSIVIACEGSKTAGELVPLAAQGGRIDDSVRHRVWGEVRQL IGEVLMRERVDLVHLHGLDFHAYLPESALTVATLHLPLDWYPGWIFESRANLFLHCVSEIQHRTAPVGAPLLPPIPNGVP LELFLTRQRKRDHAIVLSRICPEKGIHMAIQACRLADAALLIGGQVFPYEAHERYFKEELAPFLDSRRRFLGPLVFNRKR RLLASARCALVPSLVAETSSLTAMEALACGTPVIAFENGALPGVVENGRTGFLVKNVSEMAEAIMAASSLDPQVCRDAAW QLFSPQRMEQRYLDLYQGLAGMARPRQSSAEFAAGTIKQQAQAHPSFR >Mature_367_residues ALTILSVAYPFAAIGPDAVGGAEQVLSALDRAMVRNGHRSIVIACEGSKTAGELVPLAAQGGRIDDSVRHRVWGEVRQLI GEVLMRERVDLVHLHGLDFHAYLPESALTVATLHLPLDWYPGWIFESRANLFLHCVSEIQHRTAPVGAPLLPPIPNGVPL ELFLTRQRKRDHAIVLSRICPEKGIHMAIQACRLADAALLIGGQVFPYEAHERYFKEELAPFLDSRRRFLGPLVFNRKRR LLASARCALVPSLVAETSSLTAMEALACGTPVIAFENGALPGVVENGRTGFLVKNVSEMAEAIMAASSLDPQVCRDAAWQ LFSPQRMEQRYLDLYQGLAGMARPRQSSAEFAAGTIKQQAQAHPSFR
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.-.-.- [C]
Molecular weight: Translated: 40364; Mature: 40233
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTILSVAYPFAAIGPDAVGGAEQVLSALDRAMVRNGHRSIVIACEGSKTAGELVPLAA CEEEEEEHHCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC QGGRIDDSVRHRVWGEVRQLIGEVLMRERVDLVHLHGLDFHAYLPESALTVATLHLPLDW CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCEEEEEEEECCCC YPGWIFESRANLFLHCVSEIQHRTAPVGAPLLPPIPNGVPLELFLTRQRKRDHAIVLSRI CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHCCCHHHHHHHHH CPEKGIHMAIQACRLADAALLIGGQVFPYEAHERYFKEELAPFLDSRRRFLGPLVFNRKR CCCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLASARCALVPSLVAETSSLTAMEALACGTPVIAFENGALPGVVENGRTGFLVKNVSEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHH AEAIMAASSLDPQVCRDAAWQLFSPQRMEQRYLDLYQGLAGMARPRQSSAEFAAGTIKQQ HHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AQAHPSFR HHCCCCCC >Mature Secondary Structure ALTILSVAYPFAAIGPDAVGGAEQVLSALDRAMVRNGHRSIVIACEGSKTAGELVPLAA EEEEEEHHCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC QGGRIDDSVRHRVWGEVRQLIGEVLMRERVDLVHLHGLDFHAYLPESALTVATLHLPLDW CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCEEEEEEEECCCC YPGWIFESRANLFLHCVSEIQHRTAPVGAPLLPPIPNGVPLELFLTRQRKRDHAIVLSRI CCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHCCCHHHHHHHHH CPEKGIHMAIQACRLADAALLIGGQVFPYEAHERYFKEELAPFLDSRRRFLGPLVFNRKR CCCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLASARCALVPSLVAETSSLTAMEALACGTPVIAFENGALPGVVENGRTGFLVKNVSEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHH AEAIMAASSLDPQVCRDAAWQLFSPQRMEQRYLDLYQGLAGMARPRQSSAEFAAGTIKQQ HHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AQAHPSFR HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA