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The map label for this gene is ydfH [C]

Identifier: 110634910

GI number: 110634910

Start: 2757986

End: 2758741

Strand: Reverse

Name: ydfH [C]

Synonym: Meso_2569

Alternate gene names: 110634910

Gene position: 2758741-2757986 (Counterclockwise)

Preceding gene: 110634912

Following gene: 110634909

Centisome position: 62.52

GC content: 60.32

Gene sequence:

>756_bases
TTGCGCGGCATCGGTGAGAAGAAGACAAAGGGCCGGCTGGGCGCGGCCGCTGCAGCCCAGCCAGGAAGCGAGCGGGTCAG
GGGCGCGGGAGGCCAGGCCGTTTACCACGCGCTGCGAAAGGCAATTCTGGAGCTTGAGCTCGCGCCCGGCACAGGGCTCG
ATGAGGTGAGGCTCTCCGAGCAATTCCAAATGTCGCGTACGCCCATTCGCGAGGCGCTGGTGCGGCTTGCGGCCGAAGGG
CTCGTTCATACGCTGCCCAACCGCAACACCATCGTTGCACCAATCGATTTCGTGCGGCTTCCTGTCTATTTCGAAGCGCT
GACGCTGATGTACCGCGTCACCACACTTTCCGCGGCGCGTCACCATAAGCCGGAGCACCTAGCAAAAATTCGCAGCCTTC
AGGCGCATTTTGCCGACTCCGTCCGCCGCCGCAATGCACTCGCCATGATCGATGCAAACCGGAATTTCCATGTGGCGATA
GCCGAAGCAGGGGGAAACCACTATTTCACAACGCTCTTTGCGCGGCTGCTCGATGAAGGCCGTAGGATCCTGCGGGTCTA
TTATTCATCCTTCGATGACCGTCTGCCGAAGCAATATGTGGAAGAGCACGATGCGATAATCGCCGCAATCGAGGCTGGGG
ATGCTGAGCTCTGCGATAAGCTGGCTACTGCGCATGCCGCACAGATCGTGCGGCAGATTCAGAGCTATATCGTTCGCGAT
GGGGCGTCCCACATAACGCTCGACCAGCAGGCCTAG

Upstream 100 bases:

>100_bases
AGGATCATCAGGCACGGCCATAAAAACCCGATTGTTGAGCAGAGGGCGGGGACGTGCTTAATGGGCTGAAGCCATTCAAG
ACCTAAGCAGAGAACTGCCA

Downstream 100 bases:

>100_bases
CGCCCTGGAATTGGGTGCCACTGGCCTACAGCTGCGATTCCAACATTTGTATCAGCCCGCCGACATCGCCGCGCATCCGG
CACGCATCGGTTTTGTGTCG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR Family Regulatory Protein; GntR Domain-Containing Protein; Regulatory Protein; Transcriptional Regulator Gntr Family; Transcriptional Regulator Protein; GntR-Family Transcriptional Regulator; Mn-Dependent Transcriptional Regulator; Transcriptional Regulator GntR; GntR-Like; Regulatory Protein GntR; Transcription Regulator Family Protein; Transcription Regulator Protein; FCD Domain Protein; GntR Domain Protein; Transcription Regulator; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator YdhC; GntR Family Transcription Regulator Protein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRGIGEKKTKGRLGAAAAAQPGSERVRGAGGQAVYHALRKAILELELAPGTGLDEVRLSEQFQMSRTPIREALVRLAAEG
LVHTLPNRNTIVAPIDFVRLPVYFEALTLMYRVTTLSAARHHKPEHLAKIRSLQAHFADSVRRRNALAMIDANRNFHVAI
AEAGGNHYFTTLFARLLDEGRRILRVYYSSFDDRLPKQYVEEHDAIIAAIEAGDAELCDKLATAHAAQIVRQIQSYIVRD
GASHITLDQQA

Sequences:

>Translated_251_residues
MRGIGEKKTKGRLGAAAAAQPGSERVRGAGGQAVYHALRKAILELELAPGTGLDEVRLSEQFQMSRTPIREALVRLAAEG
LVHTLPNRNTIVAPIDFVRLPVYFEALTLMYRVTTLSAARHHKPEHLAKIRSLQAHFADSVRRRNALAMIDANRNFHVAI
AEAGGNHYFTTLFARLLDEGRRILRVYYSSFDDRLPKQYVEEHDAIIAAIEAGDAELCDKLATAHAAQIVRQIQSYIVRD
GASHITLDQQA
>Mature_251_residues
MRGIGEKKTKGRLGAAAAAQPGSERVRGAGGQAVYHALRKAILELELAPGTGLDEVRLSEQFQMSRTPIREALVRLAAEG
LVHTLPNRNTIVAPIDFVRLPVYFEALTLMYRVTTLSAARHHKPEHLAKIRSLQAHFADSVRRRNALAMIDANRNFHVAI
AEAGGNHYFTTLFARLLDEGRRILRVYYSSFDDRLPKQYVEEHDAIIAAIEAGDAELCDKLATAHAAQIVRQIQSYIVRD
GASHITLDQQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27823; Mature: 27823

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIGEKKTKGRLGAAAAAQPGSERVRGAGGQAVYHALRKAILELELAPGTGLDEVRLSE
CCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHH
QFQMSRTPIREALVRLAAEGLVHTLPNRNTIVAPIDFVRLPVYFEALTLMYRVTTLSAAR
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
HHKPEHLAKIRSLQAHFADSVRRRNALAMIDANRNFHVAIAEAGGNHYFTTLFARLLDEG
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHH
RRILRVYYSSFDDRLPKQYVEEHDAIIAAIEAGDAELCDKLATAHAAQIVRQIQSYIVRD
HHHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GASHITLDQQA
CCCEEECCCCC
>Mature Secondary Structure
MRGIGEKKTKGRLGAAAAAQPGSERVRGAGGQAVYHALRKAILELELAPGTGLDEVRLSE
CCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHH
QFQMSRTPIREALVRLAAEGLVHTLPNRNTIVAPIDFVRLPVYFEALTLMYRVTTLSAAR
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
HHKPEHLAKIRSLQAHFADSVRRRNALAMIDANRNFHVAIAEAGGNHYFTTLFARLLDEG
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHH
RRILRVYYSSFDDRLPKQYVEEHDAIIAAIEAGDAELCDKLATAHAAQIVRQIQSYIVRD
HHHHHHHHHHHHHCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GASHITLDQQA
CCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA