| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is yflP [H]
Identifier: 110634850
GI number: 110634850
Start: 2688065
End: 2689018
Strand: Direct
Name: yflP [H]
Synonym: Meso_2509
Alternate gene names: 110634850
Gene position: 2688065-2689018 (Clockwise)
Preceding gene: 110634843
Following gene: 110634851
Centisome position: 60.92
GC content: 62.79
Gene sequence:
>954_bases ATGAATTTGAAGACGGCGCTTCTGCCGCTCGCCATGTTTGCTGCGCTGGCTACGGGAACTGCGCAGGCACAGGTCAATCT CATGCTGCCGGCCAATCCGGGCGGTGGATGGGATTCCACCGGGCGCCAGGCTTTTCAGGCCATGAACGAGGCCGGCATCT ATACCGGCGGTGTGAACTTTACGAACAAGGGCGGAGCCGGCGGCACGATCGGCCTTGCCGAGTTCCAGGGATCGCAGAGC GGCAAGCCCGATGCGCTTGCTGTCTTCGGCGCTATCACCGTGGGCTCGATTATCCTCAACAACTCGCCGATCGACCTTTC CCAATTTCGCCCGATTGCACGGCTGACCGCCGAATATCTGGTAATCGCGGTCTCCGCCGACTCGCCGCACCAGAGTCTGC AGGACCTGGTCGAGGCGGTGAAGGCCGATCCCGGCGCCAACGCCGTGGGCGGCGGCTCGGCGGGCGGCGTCGATCACATC GCGCTGGCGCTACTCGCACAGGCTGCGGATATTCCGGTCGCCGATCTCAATTATATTCCGCAGGCGAGCGGTGCGGAGAC GGTGACAGGCATAGTCAACGGAACGCTGGCGGCGGGTATTTCCGGCATCTCCGAGTTCCAGCAGTTCGCCGAGCAGGGCC GCATCCGCATTCTCGGCATCACCTCCGCCGAGCGGAAGGCCGGCCTCGACGTGCCCACCTTCAAGGAAGCGGGTTATGAC GTGGATATTGCCAACTGGCGTGGCTTTCTCGGCGCGCCTGGCATGCCCGAAGACAACTACCAGACATGGGTGGACCGCTT CACGCAGATGAACGGCAGCGAGCCCTGGCAGAAGGTGCTGGAAACGCAGGGCTGGGACCAGTTCTTCCTTTCCGGCGAAG AGTTCGGCACCTTCATCAAGGAAGAAAACGAGCGCATCGGCGCCATCCTGAAAGAGGCCGGCCTTGCCAAGTAA
Upstream 100 bases:
>100_bases GCCTTATATGAGACTCGTATCTGTCGACAACCTTGGTTGGGATGGGTCACTTCGTCGAGTGGGCACGATTGCTTGCCCAA AACCTAAGGGAGGAATTGCG
Downstream 100 bases:
>100_bases CTGGCCGCAAAGCGACACGGCGGGAGGCGGCGCTGCCGCCCCCCGCCCCTGGTGGCTGGGCGGCCTTGTCATAGCGCTTG GCTGCGTCTGCCTTTACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNLKTALLPLAMFAALATGTAQAQVNLMLPANPGGGWDSTGRQAFQAMNEAGIYTGGVNFTNKGGAGGTIGLAEFQGSQS GKPDALAVFGAITVGSIILNNSPIDLSQFRPIARLTAEYLVIAVSADSPHQSLQDLVEAVKADPGANAVGGGSAGGVDHI ALALLAQAADIPVADLNYIPQASGAETVTGIVNGTLAAGISGISEFQQFAEQGRIRILGITSAERKAGLDVPTFKEAGYD VDIANWRGFLGAPGMPEDNYQTWVDRFTQMNGSEPWQKVLETQGWDQFFLSGEEFGTFIKEENERIGAILKEAGLAK
Sequences:
>Translated_317_residues MNLKTALLPLAMFAALATGTAQAQVNLMLPANPGGGWDSTGRQAFQAMNEAGIYTGGVNFTNKGGAGGTIGLAEFQGSQS GKPDALAVFGAITVGSIILNNSPIDLSQFRPIARLTAEYLVIAVSADSPHQSLQDLVEAVKADPGANAVGGGSAGGVDHI ALALLAQAADIPVADLNYIPQASGAETVTGIVNGTLAAGISGISEFQQFAEQGRIRILGITSAERKAGLDVPTFKEAGYD VDIANWRGFLGAPGMPEDNYQTWVDRFTQMNGSEPWQKVLETQGWDQFFLSGEEFGTFIKEENERIGAILKEAGLAK >Mature_317_residues MNLKTALLPLAMFAALATGTAQAQVNLMLPANPGGGWDSTGRQAFQAMNEAGIYTGGVNFTNKGGAGGTIGLAEFQGSQS GKPDALAVFGAITVGSIILNNSPIDLSQFRPIARLTAEYLVIAVSADSPHQSLQDLVEAVKADPGANAVGGGSAGGVDHI ALALLAQAADIPVADLNYIPQASGAETVTGIVNGTLAAGISGISEFQQFAEQGRIRILGITSAERKAGLDVPTFKEAGYD VDIANWRGFLGAPGMPEDNYQTWVDRFTQMNGSEPWQKVLETQGWDQFFLSGEEFGTFIKEENERIGAILKEAGLAK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33075; Mature: 33075
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKTALLPLAMFAALATGTAQAQVNLMLPANPGGGWDSTGRQAFQAMNEAGIYTGGVNF CCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEECCCCC TNKGGAGGTIGLAEFQGSQSGKPDALAVFGAITVGSIILNNSPIDLSQFRPIARLTAEYL CCCCCCCCCEEEHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHEEE VIAVSADSPHQSLQDLVEAVKADPGANAVGGGSAGGVDHIALALLAQAADIPVADLNYIP EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCC QASGAETVTGIVNGTLAAGISGISEFQQFAEQGRIRILGITSAERKAGLDVPTFKEAGYD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCHHHCCCC VDIANWRGFLGAPGMPEDNYQTWVDRFTQMNGSEPWQKVLETQGWDQFFLSGEEFGTFIK EEHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHEEECCHHHHHHHH EENERIGAILKEAGLAK HCCHHHHHHHHHCCCCC >Mature Secondary Structure MNLKTALLPLAMFAALATGTAQAQVNLMLPANPGGGWDSTGRQAFQAMNEAGIYTGGVNF CCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEECCCCC TNKGGAGGTIGLAEFQGSQSGKPDALAVFGAITVGSIILNNSPIDLSQFRPIARLTAEYL CCCCCCCCCEEEHCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHEEE VIAVSADSPHQSLQDLVEAVKADPGANAVGGGSAGGVDHIALALLAQAADIPVADLNYIP EEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCC QASGAETVTGIVNGTLAAGISGISEFQQFAEQGRIRILGITSAERKAGLDVPTFKEAGYD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCHHHCCCC VDIANWRGFLGAPGMPEDNYQTWVDRFTQMNGSEPWQKVLETQGWDQFFLSGEEFGTFIK EEHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHEEECCHHHHHHHH EENERIGAILKEAGLAK HCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]