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The map label for this gene is 110634843

Identifier: 110634843

GI number: 110634843

Start: 2680400

End: 2681830

Strand: Direct

Name: 110634843

Synonym: Meso_2502

Alternate gene names: NA

Gene position: 2680400-2681830 (Clockwise)

Preceding gene: 110634842

Following gene: 110634850

Centisome position: 60.75

GC content: 64.22

Gene sequence:

>1431_bases
ATGCTGTCCATACCTCTCGGGGAAGATTGCAGCGTGGAAGAGTTCCGTGCGGCCGCGCGGCACTGCCTTGCACGCGGTAT
TGCGCCCGAGGATGTTCACTTCAGCGTGGGTGGCACCTTGCCGCTGTTCGCGGAGGAGGCGCCGGAACGCGTTTCAGTTG
CGAACGTAAGAGTTCCGCGTGGCTATGCAAATCTCGTCCCCAAAATTGTCTGCCACAGCGAAGCGGACCGTTTCGCGCTG
CTCTATCGGCTGCTGTGGCGCATCCATCGCGGCGAGCGCCACGTGCTCGACAACCCGGCCGATCCCGACGCCGCCAAGGC
GCAGCGCTACGCAAAGGCGGTCGACAAGGATATCTACCGCATGCAGGCCTATGTGCGCTTCGCCGAGCGGGAAATTGATG
GCGCGCGGATTTTCGTTGCCTGGCATGAACCGCAGCATCGCATGCTTCGGTTGGCCGCGCCATTTTTCGTGGACCGGTTC
AGCAATATGGACTGGCTGATCGCAACGCCGATCGGGACCATAGCCTGGCAAGGGGGCGTTCTGGCTTTCGGCCCGCCGGC
AGCGCGGCCTGCCGAGGCGGGCGATACGGTCCTTGATGAGCTGTGGACGGCATATTTTCGTGCCACTTTCAACCCGGCTC
GCCTGCGCGTGAAGGCCATGGTGGCGCAGATGCCAAAGCGGCATTGGGCGACGATGCCCGAGACGGCGTTGATCCCCGAT
ATGGTGCGGGCAGCGGGCGCTCGCGTCGCCGAAATGGAGACCACCGCGCCAGAAACCCCGCCACGTTTCGCGGAGAGACT
TGCAGAGCGAATGGCATCAATCTCCGCGCAATCTGGCGAGCTCCTGCCGCTCGACGTCCTGCGAGAGGAGATCCAATCCT
GCAGACTGTGCCCGCTGCACGGGCCGGCGACCCAAGCCGTGCCCGGCGAGGGCGCACCCGAGGCCGAGATCATGTTTGTG
GGCGAGCAGCCAGGCGACCAAGAGGACCTTGCCGGCAGGCCTTTTGTCGGCCCCGCCGGCCAGGTGTTCGAGCGCGCGCT
TCTCGAAGCGGGAATTGCGCGGCAGAAGACTTACGTCACCAATGCCGTGAAGCATTTCAAGTTTGAGCCGCGCGGAAAAA
GGCGCGTGCATATGAAGCCGAGCGGCGGTGAGGTGTCGAAGTGCCGCTTCTGGCTGGACCGCGAGATCAGCGCCGTCAAG
CCGAAGCTCGTGGTCGCTCTGGGCGCTACCGCCATGCTGGGTCTCACCGGCCGCCCCGTGCCTGTCACCAAGGCCCGTGG
GCAGGTGATTGCTGCCGACAGCTTCTCCATCCTCGTTACCGTGCATCCGTCCTATCTCCTGCGGCTGCCCGAAAAGGAAC
GCGCCGAGGCTGAATACGAACGCTTCGTCGAGGATCTGCGGAAGGCGAGAGACTGGTGCGAGGCCGCTTGA

Upstream 100 bases:

>100_bases
TTTGTACTGACACCCGATTGGCAGCCGGGCAGCCTGCTTGAGCAACCAAGGCTGAGGCAGCGTTTGGTCGCTCCGCAGCA
GCTTTCCCTGGGGCTCTGAA

Downstream 100 bases:

>100_bases
GCCGGAAGGGAATCGGCAGGCGGATCAACATCGCATGTGGTGCGTTCCTGCACGATGGATCGCGCGCGTAACACACTCGC
CTTGGGGCGAAGGCAACTGT

Product: phage SPO1 DNA polymerase-related protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Superfamily; Phage SPO1 DNA Polymerase-Like Protein; DNA-Directed DNA Polymerase Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Helicase/Glycosylase; Phage Related DNA Polymerase; DNA Glycosylase; Uracil DNA Glycosylase Protein; Uracil DNA Glycosylase; DNA-Directed DNA Polymerase Bacteriophage-Type; N-Terminus Of Bacteriophage-Type DNA Polymerase; Uracil DNA Glycosylase Superfamily; Phage Shock Protein E; Phage DNA Polymerase; Phage SPO1 DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; N-Terminus Of Phage SPO1 DNA Polymerase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MLSIPLGEDCSVEEFRAAARHCLARGIAPEDVHFSVGGTLPLFAEEAPERVSVANVRVPRGYANLVPKIVCHSEADRFAL
LYRLLWRIHRGERHVLDNPADPDAAKAQRYAKAVDKDIYRMQAYVRFAEREIDGARIFVAWHEPQHRMLRLAAPFFVDRF
SNMDWLIATPIGTIAWQGGVLAFGPPAARPAEAGDTVLDELWTAYFRATFNPARLRVKAMVAQMPKRHWATMPETALIPD
MVRAAGARVAEMETTAPETPPRFAERLAERMASISAQSGELLPLDVLREEIQSCRLCPLHGPATQAVPGEGAPEAEIMFV
GEQPGDQEDLAGRPFVGPAGQVFERALLEAGIARQKTYVTNAVKHFKFEPRGKRRVHMKPSGGEVSKCRFWLDREISAVK
PKLVVALGATAMLGLTGRPVPVTKARGQVIAADSFSILVTVHPSYLLRLPEKERAEAEYERFVEDLRKARDWCEAA

Sequences:

>Translated_476_residues
MLSIPLGEDCSVEEFRAAARHCLARGIAPEDVHFSVGGTLPLFAEEAPERVSVANVRVPRGYANLVPKIVCHSEADRFAL
LYRLLWRIHRGERHVLDNPADPDAAKAQRYAKAVDKDIYRMQAYVRFAEREIDGARIFVAWHEPQHRMLRLAAPFFVDRF
SNMDWLIATPIGTIAWQGGVLAFGPPAARPAEAGDTVLDELWTAYFRATFNPARLRVKAMVAQMPKRHWATMPETALIPD
MVRAAGARVAEMETTAPETPPRFAERLAERMASISAQSGELLPLDVLREEIQSCRLCPLHGPATQAVPGEGAPEAEIMFV
GEQPGDQEDLAGRPFVGPAGQVFERALLEAGIARQKTYVTNAVKHFKFEPRGKRRVHMKPSGGEVSKCRFWLDREISAVK
PKLVVALGATAMLGLTGRPVPVTKARGQVIAADSFSILVTVHPSYLLRLPEKERAEAEYERFVEDLRKARDWCEAA
>Mature_476_residues
MLSIPLGEDCSVEEFRAAARHCLARGIAPEDVHFSVGGTLPLFAEEAPERVSVANVRVPRGYANLVPKIVCHSEADRFAL
LYRLLWRIHRGERHVLDNPADPDAAKAQRYAKAVDKDIYRMQAYVRFAEREIDGARIFVAWHEPQHRMLRLAAPFFVDRF
SNMDWLIATPIGTIAWQGGVLAFGPPAARPAEAGDTVLDELWTAYFRATFNPARLRVKAMVAQMPKRHWATMPETALIPD
MVRAAGARVAEMETTAPETPPRFAERLAERMASISAQSGELLPLDVLREEIQSCRLCPLHGPATQAVPGEGAPEAEIMFV
GEQPGDQEDLAGRPFVGPAGQVFERALLEAGIARQKTYVTNAVKHFKFEPRGKRRVHMKPSGGEVSKCRFWLDREISAVK
PKLVVALGATAMLGLTGRPVPVTKARGQVIAADSFSILVTVHPSYLLRLPEKERAEAEYERFVEDLRKARDWCEAA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 52907; Mature: 52907

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIPLGEDCSVEEFRAAARHCLARGIAPEDVHFSVGGTLPLFAEEAPERVSVANVRVPR
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCEEEEEEECCC
GYANLVPKIVCHSEADRFALLYRLLWRIHRGERHVLDNPADPDAAKAQRYAKAVDKDIYR
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MQAYVRFAEREIDGARIFVAWHEPQHRMLRLAAPFFVDRFSNMDWLIATPIGTIAWQGGV
HHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHEECCCE
LAFGPPAARPAEAGDTVLDELWTAYFRATFNPARLRVKAMVAQMPKRHWATMPETALIPD
EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHH
MVRAAGARVAEMETTAPETPPRFAERLAERMASISAQSGELLPLDVLREEIQSCRLCPLH
HHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
GPATQAVPGEGAPEAEIMFVGEQPGDQEDLAGRPFVGPAGQVFERALLEAGIARQKTYVT
CCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NAVKHFKFEPRGKRRVHMKPSGGEVSKCRFWLDREISAVKPKLVVALGATAMLGLTGRPV
HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHCCEEEEEECCHHHHCCCCCCC
PVTKARGQVIAADSFSILVTVHPSYLLRLPEKERAEAEYERFVEDLRKARDWCEAA
CCCCCCCCEEEECCEEEEEEECHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSIPLGEDCSVEEFRAAARHCLARGIAPEDVHFSVGGTLPLFAEEAPERVSVANVRVPR
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCCCEEEEEEECCC
GYANLVPKIVCHSEADRFALLYRLLWRIHRGERHVLDNPADPDAAKAQRYAKAVDKDIYR
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
MQAYVRFAEREIDGARIFVAWHEPQHRMLRLAAPFFVDRFSNMDWLIATPIGTIAWQGGV
HHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHEECCCE
LAFGPPAARPAEAGDTVLDELWTAYFRATFNPARLRVKAMVAQMPKRHWATMPETALIPD
EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCHHHHHH
MVRAAGARVAEMETTAPETPPRFAERLAERMASISAQSGELLPLDVLREEIQSCRLCPLH
HHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
GPATQAVPGEGAPEAEIMFVGEQPGDQEDLAGRPFVGPAGQVFERALLEAGIARQKTYVT
CCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NAVKHFKFEPRGKRRVHMKPSGGEVSKCRFWLDREISAVKPKLVVALGATAMLGLTGRPV
HHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHCCEEEEEECCHHHHCCCCCCC
PVTKARGQVIAADSFSILVTVHPSYLLRLPEKERAEAEYERFVEDLRKARDWCEAA
CCCCCCCCEEEECCEEEEEEECHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA