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The map label for this gene is 110634819

Identifier: 110634819

GI number: 110634819

Start: 2656750

End: 2657124

Strand: Direct

Name: 110634819

Synonym: Meso_2478

Alternate gene names: NA

Gene position: 2656750-2657124 (Clockwise)

Preceding gene: 110634818

Following gene: 110634823

Centisome position: 60.21

GC content: 59.2

Gene sequence:

>375_bases
ATGGCAACGCATACGGAGCAGACCGGTCACGGATATTCGCAGACCGCCATCGCCGCCCACGCAGAGAGCCAGCAGCACCC
GATCAGGATTTATCTGATCGTCTGGTTCTGGCTGTTCGTCTTGAGCGCCTGTTCTTATCTCATCGATTATATCGGCCTGC
AGGGCATGCTGCGTTGGAGCCTGATCATCACCTTCATGCTGCTGAAGGCGGGGCTGATCGTGGCGGTGTTCATGCACATG
GTGTGGGAGCGCCTGGCGCTGGTCTACGCGATCCTGCTGCCGCCGCTCGCGGTACTCGTGTTCGTCATCATCATGGCGAT
CGAATCCGATTACACCGCGCTCACCCGCATGATGTCCTTCGTCAACGGCGGCTGA

Upstream 100 bases:

>100_bases
CGATTATGAGCACGTGGAGATCATGGGCCTCTACTGGCACTTCGTCGATCTCGTCTGGGTATTCATTTTCGCATTCTTCT
ATCTCTGGTGAGGAACGGCT

Downstream 100 bases:

>100_bases
TACGACGCAGGCGATCCCCGCTGACTGCGGGGACCGACGCGCTGCGTTGTTACAATGACTGGCGGTTGGCGCGCTGCTCC
GGCGACAGGACCACAGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Small Integral Membrane Protein; Bb3-Type Cytochrome Oxidase Subunit IV; Cytochrome Oxidase Subunit IV; Integral Membrane Protein; Cytochrome Oxidase Subunit Iv

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MATHTEQTGHGYSQTAIAAHAESQQHPIRIYLIVWFWLFVLSACSYLIDYIGLQGMLRWSLIITFMLLKAGLIVAVFMHM
VWERLALVYAILLPPLAVLVFVIIMAIESDYTALTRMMSFVNGG

Sequences:

>Translated_124_residues
MATHTEQTGHGYSQTAIAAHAESQQHPIRIYLIVWFWLFVLSACSYLIDYIGLQGMLRWSLIITFMLLKAGLIVAVFMHM
VWERLALVYAILLPPLAVLVFVIIMAIESDYTALTRMMSFVNGG
>Mature_123_residues
ATHTEQTGHGYSQTAIAAHAESQQHPIRIYLIVWFWLFVLSACSYLIDYIGLQGMLRWSLIITFMLLKAGLIVAVFMHMV
WERLALVYAILLPPLAVLVFVIIMAIESDYTALTRMMSFVNGG

Specific function: Unknown

COG id: COG5605

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14036; Mature: 13905

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATHTEQTGHGYSQTAIAAHAESQQHPIRIYLIVWFWLFVLSACSYLIDYIGLQGMLRWS
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIITFMLLKAGLIVAVFMHMVWERLALVYAILLPPLAVLVFVIIMAIESDYTALTRMMSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VNGG
HCCC
>Mature Secondary Structure 
ATHTEQTGHGYSQTAIAAHAESQQHPIRIYLIVWFWLFVLSACSYLIDYIGLQGMLRWS
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIITFMLLKAGLIVAVFMHMVWERLALVYAILLPPLAVLVFVIIMAIESDYTALTRMMSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VNGG
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA