BacMap

Definition	Mesorhizobium sp. BNC1, complete genome.
Accession	NC_008254
Length	4,412,446

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The map label for this gene is gabD [H]

Identifier: 110634758

GI number: 110634758

Start: 2589242

End: 2590819

Strand: Reverse

Name: gabD [H]

Synonym: Meso_2417

Alternate gene names: 110634758

Gene position: 2590819-2589242 (Counterclockwise)

Preceding gene: 110634762

Following gene: 110634757

Centisome position: 58.72

GC content: 65.02

Gene sequence:

>1578_bases
GTGACCATTCGTGCCGAGCCGGTTCCTGCTCGTAACCTGTCCGATCAGATTTCAGTTTTGCGGTGTCCTTCCAAGAGGCT
TTCCATGAATGCTGCCACGGCCAAGATCGATTTATCCGCGAAGCTCGACCTGCTCCATGACAAAAGCCTGCTGCGCGAGC
TGGCCTATGTCGACGGTCGCTGGGTAACGGGCCACGAGCCGGTCAACTTCGAGGTCCGCGATCCCGCCACCGGCGCTGTG
CTCGCCTATGTCGCTTCCCTTAACGCGGCACAGGTCGACTCCGCGATCGATGCGGCCGCCCGCGCCTTTCTGTCGTGGAA
GAGGCTCTTGCCTCAGGAACGCGCCGCAACCTTGCGCGCCTGGTACGAACTCATCGTCGCCGCCAAGGAAGACCTGGCGC
TGCTGATGACGTTGGAACAGGGCAAGCCGCTGGCGGAATCGCGCGGCGAGATCGATTATGCCGCTTCCTTCGTCGAATGG
TATGCCGAGGAAGCAAAGCGCCTCAACGTCGAGAGCGTGACCAGCCATTTACCCGGTGCCGAGATGATGGTTCGGCGCGA
GCCGCTCGGCGTCGTTGGCGTGGTAACGCCCTGGAACTTTCCGTCGGCCATGCTGACGCGCAAGGCGGCCGCAGCTTTAG
CCGCCGGCTGCACGATCGTCGCCCATCCTTCTTCCGAGACGCCGCTGTCGGCCCTTGCGCTGGCCGAACTCGGCGAACGA
GCCGGGTTGCCGGCCGGCGTGTTAAACGTCGTCACGGGCGATGCCGCGACCATCGTAGGTCGCATGTGCGGGGATTCCCG
CATCCGTGCCATGAGCTTCACCGGCTCGACCGAGATCGGACGGCTGATCGCCGCGCAATGCGCGCCTACTATGAAGCGCC
TCGTGATGGAGCTTGGCGGCCATGCGCCCCTGATCGTGTTCGAAGACGCCCCGCTCGACAAAGCCGTCGATATCGCGATC
GGCGCGAAATTCGCGACCTCGGGCCAGGACTGCCTCGCCGCCAACCGGATATATGTGCAGCGGGGAATCTATGGCGCCTT
CTGCGAAGCCTTTGCCGCGCGGATCGCGACCCTGAAGGTGTCGGACGGACTCGACGAGACCGGTGATATCGGCCCGCTGA
TGCATGAGCGGGCAATAGCAAAGGTCGAGGAGCAGGTCACCGATGCGCTCGGGCGCGGCGCGCGCTGCCTGATCGGCGGC
GAACGTCATCCGGCCGGCCGGCTGTTCTACCAGCCGACCCTGCTGGCCGATGTACCCGACGCGGCGCTGATCATGCGCGA
GGAGACTTTCGGGCCGGTTGCCGCCGCGGTCCCCTTCGACACCGAGGACGAGGTCGTGCGCCGCGCCAACAACACCGAAT
ACGGGCTCGTCGCCTATGTCGTCACCGAAAACGGAGCTCGCCAACTGCGCATGGGCCGCGCGCTGGATTACGGCATGGTC
GCCATCAACCGCGTGAAGATCACCGGCGCCCCCATCCCCTTCGGCGGCGTCAAGCAGTCCGGCATAGGGCGCGAAGGCGC
CCGCCACGGGCTGGAGGCCTTCACCGATCTCAAATATCTGTGCCTCGACGCAGCCTGA

Upstream 100 bases:

>100_bases
GTAAAAACATGCCGATGAGAGCCGAAATTCGGCGCATGTCCCATTTTAGCGCCGAAAACCGTCCATGGGATAGGATAATC
TGCATGGGGACTGACCGATT

Downstream 100 bases:

>100_bases
AAAAAAGGAAGCAGGAATCCGCCATGACCGACCGCTCGAACGAACTCAACGCCTGGGATCGCGACCATTTCTTCCATCCC
TCGACCCATATGGGCACGCA

Product: succinate semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MTIRAEPVPARNLSDQISVLRCPSKRLSMNAATAKIDLSAKLDLLHDKSLLRELAYVDGRWVTGHEPVNFEVRDPATGAV
LAYVASLNAAQVDSAIDAAARAFLSWKRLLPQERAATLRAWYELIVAAKEDLALLMTLEQGKPLAESRGEIDYAASFVEW
YAEEAKRLNVESVTSHLPGAEMMVRREPLGVVGVVTPWNFPSAMLTRKAAAALAAGCTIVAHPSSETPLSALALAELGER
AGLPAGVLNVVTGDAATIVGRMCGDSRIRAMSFTGSTEIGRLIAAQCAPTMKRLVMELGGHAPLIVFEDAPLDKAVDIAI
GAKFATSGQDCLAANRIYVQRGIYGAFCEAFAARIATLKVSDGLDETGDIGPLMHERAIAKVEEQVTDALGRGARCLIGG
ERHPAGRLFYQPTLLADVPDAALIMREETFGPVAAAVPFDTEDEVVRRANNTEYGLVAYVVTENGARQLRMGRALDYGMV
AINRVKITGAPIPFGGVKQSGIGREGARHGLEAFTDLKYLCLDAA

Sequences:

>Translated_525_residues
MTIRAEPVPARNLSDQISVLRCPSKRLSMNAATAKIDLSAKLDLLHDKSLLRELAYVDGRWVTGHEPVNFEVRDPATGAV
LAYVASLNAAQVDSAIDAAARAFLSWKRLLPQERAATLRAWYELIVAAKEDLALLMTLEQGKPLAESRGEIDYAASFVEW
YAEEAKRLNVESVTSHLPGAEMMVRREPLGVVGVVTPWNFPSAMLTRKAAAALAAGCTIVAHPSSETPLSALALAELGER
AGLPAGVLNVVTGDAATIVGRMCGDSRIRAMSFTGSTEIGRLIAAQCAPTMKRLVMELGGHAPLIVFEDAPLDKAVDIAI
GAKFATSGQDCLAANRIYVQRGIYGAFCEAFAARIATLKVSDGLDETGDIGPLMHERAIAKVEEQVTDALGRGARCLIGG
ERHPAGRLFYQPTLLADVPDAALIMREETFGPVAAAVPFDTEDEVVRRANNTEYGLVAYVVTENGARQLRMGRALDYGMV
AINRVKITGAPIPFGGVKQSGIGREGARHGLEAFTDLKYLCLDAA
>Mature_524_residues
TIRAEPVPARNLSDQISVLRCPSKRLSMNAATAKIDLSAKLDLLHDKSLLRELAYVDGRWVTGHEPVNFEVRDPATGAVL
AYVASLNAAQVDSAIDAAARAFLSWKRLLPQERAATLRAWYELIVAAKEDLALLMTLEQGKPLAESRGEIDYAASFVEWY
AEEAKRLNVESVTSHLPGAEMMVRREPLGVVGVVTPWNFPSAMLTRKAAAALAAGCTIVAHPSSETPLSALALAELGERA
GLPAGVLNVVTGDAATIVGRMCGDSRIRAMSFTGSTEIGRLIAAQCAPTMKRLVMELGGHAPLIVFEDAPLDKAVDIAIG
AKFATSGQDCLAANRIYVQRGIYGAFCEAFAARIATLKVSDGLDETGDIGPLMHERAIAKVEEQVTDALGRGARCLIGGE
RHPAGRLFYQPTLLADVPDAALIMREETFGPVAAAVPFDTEDEVVRRANNTEYGLVAYVVTENGARQLRMGRALDYGMVA
INRVKITGAPIPFGGVKQSGIGREGARHGLEAFTDLKYLCLDAA

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=518, Percent_Identity=43.6293436293436, Blast_Score=418, Evalue=1e-117,
Organism=Homo sapiens, GI25777721, Length=531, Percent_Identity=42.3728813559322, Blast_Score=409, Evalue=1e-114,
Organism=Homo sapiens, GI12007648, Length=482, Percent_Identity=35.6846473029046, Blast_Score=292, Evalue=7e-79,
Organism=Homo sapiens, GI25777730, Length=504, Percent_Identity=35.1190476190476, Blast_Score=274, Evalue=2e-73,
Organism=Homo sapiens, GI25777732, Length=469, Percent_Identity=36.4605543710021, Blast_Score=272, Evalue=7e-73,
Organism=Homo sapiens, GI153266822, Length=472, Percent_Identity=33.8983050847458, Blast_Score=268, Evalue=7e-72,
Organism=Homo sapiens, GI115387104, Length=458, Percent_Identity=36.0262008733624, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI25777724, Length=491, Percent_Identity=34.826883910387, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI238814322, Length=477, Percent_Identity=32.9140461215933, Blast_Score=266, Evalue=4e-71,
Organism=Homo sapiens, GI21614513, Length=477, Percent_Identity=32.4947589098532, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI21361176, Length=488, Percent_Identity=34.0163934426229, Blast_Score=251, Evalue=9e-67,
Organism=Homo sapiens, GI25952152, Length=474, Percent_Identity=32.9113924050633, Blast_Score=242, Evalue=7e-64,
Organism=Homo sapiens, GI25777728, Length=409, Percent_Identity=35.9413202933985, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI25777726, Length=491, Percent_Identity=31.9755600814664, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI301500698, Length=280, Percent_Identity=38.2142857142857, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI11095441, Length=475, Percent_Identity=28.2105263157895, Blast_Score=185, Evalue=1e-46,
Organism=Homo sapiens, GI188035924, Length=448, Percent_Identity=27.0089285714286, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI310128103, Length=448, Percent_Identity=27.0089285714286, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI310128093, Length=448, Percent_Identity=26.7857142857143, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI310128091, Length=402, Percent_Identity=28.3582089552239, Blast_Score=154, Evalue=1e-37,
Organism=Homo sapiens, GI223972651, Length=462, Percent_Identity=30.0865800865801, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI73466520, Length=370, Percent_Identity=26.4864864864865, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI4557303, Length=370, Percent_Identity=26.4864864864865, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI206597441, Length=437, Percent_Identity=28.604118993135, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI206597439, Length=437, Percent_Identity=28.604118993135, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI22907049, Length=437, Percent_Identity=28.604118993135, Blast_Score=134, Evalue=3e-31,
Organism=Homo sapiens, GI310128089, Length=276, Percent_Identity=30.4347826086957, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI310128097, Length=248, Percent_Identity=31.0483870967742, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI71773324, Length=361, Percent_Identity=25.207756232687, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI223972653, Length=465, Percent_Identity=28.1720430107527, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI4502043, Length=375, Percent_Identity=25.6, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI238814371, Length=375, Percent_Identity=25.6, Blast_Score=112, Evalue=7e-25,
Organism=Homo sapiens, GI73695881, Length=336, Percent_Identity=24.702380952381, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI73695879, Length=336, Percent_Identity=24.702380952381, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI310128087, Length=271, Percent_Identity=27.6752767527675, Blast_Score=106, Evalue=7e-23,
Organism=Homo sapiens, GI310128095, Length=276, Percent_Identity=28.2608695652174, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI25777736, Length=469, Percent_Identity=24.0938166311301, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI25777734, Length=469, Percent_Identity=24.0938166311301, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI238859541, Length=469, Percent_Identity=24.0938166311301, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI310128099, Length=214, Percent_Identity=25.2336448598131, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI310128101, Length=214, Percent_Identity=25.2336448598131, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1789015, Length=478, Percent_Identity=49.581589958159, Blast_Score=503, Evalue=1e-143,
Organism=Escherichia coli, GI87081896, Length=477, Percent_Identity=37.5262054507338, Blast_Score=280, Evalue=1e-76,
Organism=Escherichia coli, GI1787684, Length=471, Percent_Identity=35.244161358811, Blast_Score=279, Evalue=3e-76,
Organism=Escherichia coli, GI1787715, Length=466, Percent_Identity=37.9828326180258, Blast_Score=278, Evalue=5e-76,
Organism=Escherichia coli, GI1787558, Length=472, Percent_Identity=35.8050847457627, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI1786504, Length=486, Percent_Identity=37.037037037037, Blast_Score=255, Evalue=4e-69,
Organism=Escherichia coli, GI87081926, Length=450, Percent_Identity=34, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI87082295, Length=488, Percent_Identity=34.0163934426229, Blast_Score=221, Evalue=1e-58,
Organism=Escherichia coli, GI1788042, Length=472, Percent_Identity=32.6271186440678, Blast_Score=186, Evalue=4e-48,
Organism=Escherichia coli, GI1787250, Length=441, Percent_Identity=28.1179138321995, Blast_Score=148, Evalue=7e-37,
Organism=Escherichia coli, GI1787653, Length=306, Percent_Identity=26.1437908496732, Blast_Score=73, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17534119, Length=467, Percent_Identity=43.6830835117773, Blast_Score=377, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI133930964, Length=497, Percent_Identity=35.6136820925553, Blast_Score=303, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI17562198, Length=493, Percent_Identity=34.2799188640974, Blast_Score=268, Evalue=6e-72,
Organism=Caenorhabditis elegans, GI25144435, Length=473, Percent_Identity=34.46088794926, Blast_Score=264, Evalue=7e-71,
Organism=Caenorhabditis elegans, GI25143874, Length=506, Percent_Identity=33.596837944664, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI25143876, Length=488, Percent_Identity=34.2213114754098, Blast_Score=258, Evalue=6e-69,
Organism=Caenorhabditis elegans, GI71995606, Length=480, Percent_Identity=35.2083333333333, Blast_Score=251, Evalue=7e-67,
Organism=Caenorhabditis elegans, GI17551164, Length=461, Percent_Identity=32.9718004338395, Blast_Score=241, Evalue=5e-64,
Organism=Caenorhabditis elegans, GI32564736, Length=413, Percent_Identity=34.8668280871671, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI71995613, Length=419, Percent_Identity=34.6062052505967, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI115534176, Length=497, Percent_Identity=29.5774647887324, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI71986308, Length=472, Percent_Identity=29.2372881355932, Blast_Score=184, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI32566756, Length=424, Percent_Identity=27.5943396226415, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI25146391, Length=424, Percent_Identity=27.5943396226415, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI25146394, Length=424, Percent_Identity=27.5943396226415, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17564084, Length=421, Percent_Identity=27.3159144893112, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17534447, Length=481, Percent_Identity=25.7796257796258, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI32564151, Length=410, Percent_Identity=25.609756097561, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI115532534, Length=420, Percent_Identity=25.2380952380952, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71990744, Length=296, Percent_Identity=26.3513513513513, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319478, Length=481, Percent_Identity=45.7380457380457, Blast_Score=436, Evalue=1e-123,
Organism=Saccharomyces cerevisiae, GI6324950, Length=468, Percent_Identity=34.4017094017094, Blast_Score=283, Evalue=5e-77,
Organism=Saccharomyces cerevisiae, GI6320917, Length=468, Percent_Identity=34.8290598290598, Blast_Score=278, Evalue=2e-75,
Organism=Saccharomyces cerevisiae, GI6325196, Length=467, Percent_Identity=33.6188436830835, Blast_Score=271, Evalue=2e-73,
Organism=Saccharomyces cerevisiae, GI6323821, Length=482, Percent_Identity=31.9502074688797, Blast_Score=253, Evalue=5e-68,
Organism=Saccharomyces cerevisiae, GI6323822, Length=477, Percent_Identity=31.2368972746331, Blast_Score=244, Evalue=3e-65,
Organism=Saccharomyces cerevisiae, GI6321828, Length=490, Percent_Identity=27.3469387755102, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6321826, Length=529, Percent_Identity=26.8431001890359, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6323757, Length=332, Percent_Identity=27.710843373494, Blast_Score=101, Evalue=3e-22,
Organism=Drosophila melanogaster, GI281362580, Length=479, Percent_Identity=45.5114822546973, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI62472918, Length=479, Percent_Identity=45.5114822546973, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI62472926, Length=479, Percent_Identity=45.5114822546973, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI62472936, Length=479, Percent_Identity=45.5114822546973, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI21356737, Length=479, Percent_Identity=45.5114822546973, Blast_Score=447, Evalue=1e-126,
Organism=Drosophila melanogaster, GI24650465, Length=471, Percent_Identity=35.4564755838641, Blast_Score=292, Evalue=4e-79,
Organism=Drosophila melanogaster, GI24585660, Length=476, Percent_Identity=32.9831932773109, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI20129399, Length=478, Percent_Identity=34.9372384937238, Blast_Score=263, Evalue=3e-70,
Organism=Drosophila melanogaster, GI24666674, Length=477, Percent_Identity=27.8825995807128, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24638878, Length=478, Percent_Identity=28.0334728033473, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24638876, Length=478, Percent_Identity=28.0334728033473, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI281360299, Length=340, Percent_Identity=27.0588235294118, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI281360297, Length=340, Percent_Identity=27.0588235294118, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI281360295, Length=340, Percent_Identity=27.0588235294118, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24586250, Length=340, Percent_Identity=27.0588235294118, Blast_Score=123, Evalue=3e-28,
Organism=Drosophila melanogaster, GI281360301, Length=340, Percent_Identity=27.0588235294118, Blast_Score=123, Evalue=4e-28,
Organism=Drosophila melanogaster, GI45552499, Length=340, Percent_Identity=26.7647058823529, Blast_Score=122, Evalue=8e-28,
Organism=Drosophila melanogaster, GI281360303, Length=340, Percent_Identity=26.7647058823529, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24668425, Length=455, Percent_Identity=24.1758241758242, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24668417, Length=455, Percent_Identity=24.1758241758242, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24668413, Length=455, Percent_Identity=24.1758241758242, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28574525, Length=466, Percent_Identity=25.1072961373391, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28571806, Length=491, Percent_Identity=21.3849287169043, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571802, Length=491, Percent_Identity=21.3849287169043, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571800, Length=491, Percent_Identity=21.3849287169043, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571798, Length=491, Percent_Identity=21.3849287169043, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571796, Length=491, Percent_Identity=21.3849287169043, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571794, Length=491, Percent_Identity=21.3849287169043, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 56162; Mature: 56031

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRAEPVPARNLSDQISVLRCPSKRLSMNAATAKIDLSAKLDLLHDKSLLRELAYVDGR
CCCCCCCCCCCCCCCCHHEEECCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCE
WVTGHEPVNFEVRDPATGAVLAYVASLNAAQVDSAIDAAARAFLSWKRLLPQERAATLRA
EECCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
WYELIVAAKEDLALLMTLEQGKPLAESRGEIDYAASFVEWYAEEAKRLNVESVTSHLPGA
HHHHHHHCCCCEEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCH
EMMVRREPLGVVGVVTPWNFPSAMLTRKAAAALAAGCTIVAHPSSETPLSALALAELGER
HHEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHH
AGLPAGVLNVVTGDAATIVGRMCGDSRIRAMSFTGSTEIGRLIAAQCAPTMKRLVMELGG
CCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
HAPLIVFEDAPLDKAVDIAIGAKFATSGQDCLAANRIYVQRGIYGAFCEAFAARIATLKV
CCCEEEEECCCCCCCEEEEECCEECCCCCHHHHHCCEEEECCCHHHHHHHHHHHHEEEEE
SDGLDETGDIGPLMHERAIAKVEEQVTDALGRGARCLIGGERHPAGRLFYQPTLLADVPD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCEEECCCCC
AALIMREETFGPVAAAVPFDTEDEVVRRANNTEYGLVAYVVTENGARQLRMGRALDYGMV
HHEEEECCCCCCEEEECCCCCHHHHHHHCCCCCCEEEEEEEECCCHHHHHHCCCCCCCEE
AINRVKITGAPIPFGGVKQSGIGREGARHGLEAFTDLKYLCLDAA
EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEECCC
>Mature Secondary Structure 
TIRAEPVPARNLSDQISVLRCPSKRLSMNAATAKIDLSAKLDLLHDKSLLRELAYVDGR
CCCCCCCCCCCCCCCHHEEECCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCE
WVTGHEPVNFEVRDPATGAVLAYVASLNAAQVDSAIDAAARAFLSWKRLLPQERAATLRA
EECCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
WYELIVAAKEDLALLMTLEQGKPLAESRGEIDYAASFVEWYAEEAKRLNVESVTSHLPGA
HHHHHHHCCCCEEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCH
EMMVRREPLGVVGVVTPWNFPSAMLTRKAAAALAAGCTIVAHPSSETPLSALALAELGER
HHEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHH
AGLPAGVLNVVTGDAATIVGRMCGDSRIRAMSFTGSTEIGRLIAAQCAPTMKRLVMELGG
CCCCHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCC
HAPLIVFEDAPLDKAVDIAIGAKFATSGQDCLAANRIYVQRGIYGAFCEAFAARIATLKV
CCCEEEEECCCCCCCEEEEECCEECCCCCHHHHHCCEEEECCCHHHHHHHHHHHHEEEEE
SDGLDETGDIGPLMHERAIAKVEEQVTDALGRGARCLIGGERHPAGRLFYQPTLLADVPD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCEEECCCCC
AALIMREETFGPVAAAVPFDTEDEVVRRANNTEYGLVAYVVTENGARQLRMGRALDYGMV
HHEEEECCCCCCEEEECCCCCHHHHHHHCCCCCCEEEEEEEECCCHHHHHHCCCCCCCEE
AINRVKITGAPIPFGGVKQSGIGREGARHGLEAFTDLKYLCLDAA
EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]