| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634736
Identifier: 110634736
GI number: 110634736
Start: 2550589
End: 2551665
Strand: Reverse
Name: 110634736
Synonym: Meso_2394
Alternate gene names: NA
Gene position: 2551665-2550589 (Counterclockwise)
Preceding gene: 110634737
Following gene: 110634735
Centisome position: 57.83
GC content: 62.3
Gene sequence:
>1077_bases ATGGGCAGCCAGGTCGACATCCTGTTTTCAGGAACGGGCTACTTCACTGAGATCATGCTTGGCGACATCGCCGCGACTGC GAAGTCTCCGCTGCGCATTGTTATCGGCGGGCGTAATCCCGTTAGAATGAAATGGCTTGTGGATGCCTGCCAGTCGCGAG CGACGATCTACGGTACCAGCGCCACGTTCGAGAGCGTTCATCTCGATTCGAGTTCGCCTGAGGCGTTGGCCGAGCCGCTC TCAAAATTGCGGCCGCGAGTCGTTGTCCAGTCGGCCTCGATCCAGTCACCGTGGCGCGTCGACAACGGAGAAAGCCGATG GTCCGACCTTGTGGCGAGCGCCGGGTTTGGGTCGACAATTGCCTTCCACACGCTGCTCGCTTGGCGAATGGCCTCCGCGC TCGAAATGCTGGGCTTAGATAGCCTTTTCGTCAACACGTGCTATCCAGACGGCGTCAACCAAGTGCTCGCCGCCGCTGGA AAGCCGCTCACCACCGGGGTGGGAAATGTTGGCATTTTCCCGGCGCTGATCGGCGGGCGGCTGCCTGTGGAGCAACGTGC TGATTTGCGTGTGCTTGGTCACCATCGGCACCTGGTCGAGTGGCGCAAGCCCGTTGGGACCCGCGGGGGCAAGCCTGTGC GCGCGTGGCTCGGTGACGAGGAAATCGCGGACACGGAAGCCATAACTCGTGATATCCAGCTTCCTTACCGTGATTTGAAC CTAATTTCGGGGGCGAGTGCGGTGCCGGTGCTTCTTGCCCTGGCTGGAGAGGGGCGGCGGCGCGCGCATGTTCCCGGCCC GCAAGGCCGACCCGGCGGGTATCCCGTCATGGTCGATCGAGACGGGGTCACCCTCGATCTGCCCAAAGGACTGACCGAGC ATGAGGCGATCGCCTGGAACCGTCAGTTCGAAGATGCCGATGGCGTCAGTGTGAAAGAGGGCAGGGTGGTTTACGCCGAG CATACTCAGGAGGCGCTTCGCGCCCATGATCCGGATATCGCGAACGGCTTTGCCGTGACGGAGGTAGAGGACGCGGCAGC AGCCATTGGAGCATTGCGCGAGCGGCTGGGAGGCTGA
Upstream 100 bases:
>100_bases GGACGTGTTGCACGTTACCGCGACGGGTTCTCAGCTCCTTTCCGACTATTCCAACACCGACGTTCTCATCCGGATCGACT AAGTGGAAGGAGCGTTTGCA
Downstream 100 bases:
>100_bases CCGGCGAAAAAGGAAACCTAATATGAAAGTGCTTGTAATAGGCGCCGGCAATGGAGGCGCGGCCGCGGCAGTCGAGCTGA CGCAAGCCGGTCACAATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MGSQVDILFSGTGYFTEIMLGDIAATAKSPLRIVIGGRNPVRMKWLVDACQSRATIYGTSATFESVHLDSSSPEALAEPL SKLRPRVVVQSASIQSPWRVDNGESRWSDLVASAGFGSTIAFHTLLAWRMASALEMLGLDSLFVNTCYPDGVNQVLAAAG KPLTTGVGNVGIFPALIGGRLPVEQRADLRVLGHHRHLVEWRKPVGTRGGKPVRAWLGDEEIADTEAITRDIQLPYRDLN LISGASAVPVLLALAGEGRRRAHVPGPQGRPGGYPVMVDRDGVTLDLPKGLTEHEAIAWNRQFEDADGVSVKEGRVVYAE HTQEALRAHDPDIANGFAVTEVEDAAAAIGALRERLGG
Sequences:
>Translated_358_residues MGSQVDILFSGTGYFTEIMLGDIAATAKSPLRIVIGGRNPVRMKWLVDACQSRATIYGTSATFESVHLDSSSPEALAEPL SKLRPRVVVQSASIQSPWRVDNGESRWSDLVASAGFGSTIAFHTLLAWRMASALEMLGLDSLFVNTCYPDGVNQVLAAAG KPLTTGVGNVGIFPALIGGRLPVEQRADLRVLGHHRHLVEWRKPVGTRGGKPVRAWLGDEEIADTEAITRDIQLPYRDLN LISGASAVPVLLALAGEGRRRAHVPGPQGRPGGYPVMVDRDGVTLDLPKGLTEHEAIAWNRQFEDADGVSVKEGRVVYAE HTQEALRAHDPDIANGFAVTEVEDAAAAIGALRERLGG >Mature_357_residues GSQVDILFSGTGYFTEIMLGDIAATAKSPLRIVIGGRNPVRMKWLVDACQSRATIYGTSATFESVHLDSSSPEALAEPLS KLRPRVVVQSASIQSPWRVDNGESRWSDLVASAGFGSTIAFHTLLAWRMASALEMLGLDSLFVNTCYPDGVNQVLAAAGK PLTTGVGNVGIFPALIGGRLPVEQRADLRVLGHHRHLVEWRKPVGTRGGKPVRAWLGDEEIADTEAITRDIQLPYRDLNL ISGASAVPVLLALAGEGRRRAHVPGPQGRPGGYPVMVDRDGVTLDLPKGLTEHEAIAWNRQFEDADGVSVKEGRVVYAEH TQEALRAHDPDIANGFAVTEVEDAAAAIGALRERLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38391; Mature: 38260
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSQVDILFSGTGYFTEIMLGDIAATAKSPLRIVIGGRNPVRMKWLVDACQSRATIYGTS CCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHCCCEEEECC ATFESVHLDSSSPEALAEPLSKLRPRVVVQSASIQSPWRVDNGESRWSDLVASAGFGSTI CCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHH AFHTLLAWRMASALEMLGLDSLFVNTCYPDGVNQVLAAAGKPLTTGVGNVGIFPALIGGR HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC LPVEQRADLRVLGHHRHLVEWRKPVGTRGGKPVRAWLGDEEIADTEAITRDIQLPYRDLN CCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHH LISGASAVPVLLALAGEGRRRAHVPGPQGRPGGYPVMVDRDGVTLDLPKGLTEHEAIAWN HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCHHEEEC RQFEDADGVSVKEGRVVYAEHTQEALRAHDPDIANGFAVTEVEDAAAAIGALRERLGG CCCCCCCCCEECCCEEEEEHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure GSQVDILFSGTGYFTEIMLGDIAATAKSPLRIVIGGRNPVRMKWLVDACQSRATIYGTS CCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHCCCEEEECC ATFESVHLDSSSPEALAEPLSKLRPRVVVQSASIQSPWRVDNGESRWSDLVASAGFGSTI CCEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHH AFHTLLAWRMASALEMLGLDSLFVNTCYPDGVNQVLAAAGKPLTTGVGNVGIFPALIGGR HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC LPVEQRADLRVLGHHRHLVEWRKPVGTRGGKPVRAWLGDEEIADTEAITRDIQLPYRDLN CCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHH LISGASAVPVLLALAGEGRRRAHVPGPQGRPGGYPVMVDRDGVTLDLPKGLTEHEAIAWN HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCHHEEEC RQFEDADGVSVKEGRVVYAEHTQEALRAHDPDIANGFAVTEVEDAAAAIGALRERLGG CCCCCCCCCEECCCEEEEEHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA