Click here to switch to the map view.

The map label for this gene is odh [H]

Identifier: 110634735

GI number: 110634735

Start: 2549487

End: 2550566

Strand: Reverse

Name: odh [H]

Synonym: Meso_2393

Alternate gene names: 110634735

Gene position: 2550566-2549487 (Counterclockwise)

Preceding gene: 110634736

Following gene: 110634734

Centisome position: 57.8

GC content: 63.33

Gene sequence:

>1080_bases
ATGAAAGTGCTTGTAATAGGCGCCGGCAATGGAGGCGCGGCCGCGGCAGTCGAGCTGACGCAAGCCGGTCACAATGTGAC
GCTTTATGCGCGTTCAGAAGAAACGCTGGCCCCTTTTCGCCGGGACGGCATTCGTTTTGCGGGTGTGCTGGGGGAAGGGC
GCGTGCGACCTGCTGCCATTACCACCGGTCTTGGCGAGGCTGTGCGGGACCAGCATGCGGCAGTCGTCGCGCTACCTACT
TTTGCGCATGCCGGAGTTGCCCAGGCGCTCCACGCGGCGGGCTGGGACGCTCGGCGCCCGATCATTCTTAATCCGGGGCA
TACTGGGGGAGCCCTCGAGGTTGAGACTGTGTTCCGACGGCTTAGCGCCGCCGTTCCTCCGATCGTGGAATTTGCGACCC
TGAGCTATGTCGCGCGCAAGCCGGAACCTGATTTCGTCAACGTCACCGGCCGTGCGAAGGCTTTGCGCGCAGCGGCGCTG
CCCGGCTGTTCCGACGCGCTTGAAATTGCCTGCGCGCTTTTTCCCGGCGCCTACGATACAGGCGACGTAATTGCCAGCGA
CCTAAGCAACGTCAACATGGTCATCCATCCGCCAGGGGCGATGCTTGGGGCAGCCTGGGTCGAGGCGACGGGGGGCGACT
TCACCTTTTATGTGCAAGGCATGACGCCGGGGGTGATCGGGGTCATGCGCGGACTGGACGCGGAACGCAGAGCAATCGCA
CGCGCTTTCGGTCACGAATTGCCGACGATAATCGCAGAGATGCGTGCGATCGGGACCGTGCCGCCCGACGCCCAGGACGA
CGATTACTTGGCGATCGCCGCTGGAGAGGCCAACCGGAAGATCAAGGCGCCTGATAGCCTGCGCCATCGGTACTACATGG
AGGATTTTGCGCACGGGCTCGTGCCGCTGCTGGTTTATGCGCGATTGGCCGATGTCCCCACGCCGACGGCGTCGGCGCTT
GTGGAACTCCACGCAAGCATGACAAGGGACCTGCCCAAACCAGCAATGCGCGATGCGGCGGCAATGGGGCTTGAGAACGC
GACGATGGATATGTTGCAAAGGCGCGCCGGGATCAGGTGA

Upstream 100 bases:

>100_bases
GCGAACGGCTTTGCCGTGACGGAGGTAGAGGACGCGGCAGCAGCCATTGGAGCATTGCGCGAGCGGCTGGGAGGCTGACC
GGCGAAAAAGGAAACCTAAT

Downstream 100 bases:

>100_bases
ACCGCCGATCATCACTTGAGGCCGTGCCGGTGATTTGTGACGAGGAGTTGGAACCATGTCCCTTGCACTAAACGAAGCAC
GGTTGGGCAAGGCTGCCCAC

Product: NAD/NADP octopine/nopaline dehydrogenase

Products: NA

Alternate protein names: N-(1-D-carboxyethyl)-L-norvaline dehydrogenase [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKVLVIGAGNGGAAAAVELTQAGHNVTLYARSEETLAPFRRDGIRFAGVLGEGRVRPAAITTGLGEAVRDQHAAVVALPT
FAHAGVAQALHAAGWDARRPIILNPGHTGGALEVETVFRRLSAAVPPIVEFATLSYVARKPEPDFVNVTGRAKALRAAAL
PGCSDALEIACALFPGAYDTGDVIASDLSNVNMVIHPPGAMLGAAWVEATGGDFTFYVQGMTPGVIGVMRGLDAERRAIA
RAFGHELPTIIAEMRAIGTVPPDAQDDDYLAIAAGEANRKIKAPDSLRHRYYMEDFAHGLVPLLVYARLADVPTPTASAL
VELHASMTRDLPKPAMRDAAAMGLENATMDMLQRRAGIR

Sequences:

>Translated_359_residues
MKVLVIGAGNGGAAAAVELTQAGHNVTLYARSEETLAPFRRDGIRFAGVLGEGRVRPAAITTGLGEAVRDQHAAVVALPT
FAHAGVAQALHAAGWDARRPIILNPGHTGGALEVETVFRRLSAAVPPIVEFATLSYVARKPEPDFVNVTGRAKALRAAAL
PGCSDALEIACALFPGAYDTGDVIASDLSNVNMVIHPPGAMLGAAWVEATGGDFTFYVQGMTPGVIGVMRGLDAERRAIA
RAFGHELPTIIAEMRAIGTVPPDAQDDDYLAIAAGEANRKIKAPDSLRHRYYMEDFAHGLVPLLVYARLADVPTPTASAL
VELHASMTRDLPKPAMRDAAAMGLENATMDMLQRRAGIR
>Mature_359_residues
MKVLVIGAGNGGAAAAVELTQAGHNVTLYARSEETLAPFRRDGIRFAGVLGEGRVRPAAITTGLGEAVRDQHAAVVALPT
FAHAGVAQALHAAGWDARRPIILNPGHTGGALEVETVFRRLSAAVPPIVEFATLSYVARKPEPDFVNVTGRAKALRAAAL
PGCSDALEIACALFPGAYDTGDVIASDLSNVNMVIHPPGAMLGAAWVEATGGDFTFYVQGMTPGVIGVMRGLDAERRAIA
RAFGHELPTIIAEMRAIGTVPPDAQDDDYLAIAAGEANRKIKAPDSLRHRYYMEDFAHGLVPLLVYARLADVPTPTASAL
VELHASMTRDLPKPAMRDAAAMGLENATMDMLQRRAGIR

Specific function: In the forward direction acts also on secondary amine dicarboxylates such as N-(1-carboxyethyl)methionine and N-(1- carboxyethyl)phenylalanine. In the reverse direction, the enzyme also acts on neutral amino acids as an amino donor. They include L-amino a

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysopine/nopaline/octopine/opine/vitopine dehydrogenases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR011128
- InterPro:   IPR016040
- InterPro:   IPR003421 [H]

Pfam domain/function: PF01210 NAD_Gly3P_dh_N; PF02317 Octopine_DH [H]

EC number: =1.5.1.28 [H]

Molecular weight: Translated: 37823; Mature: 37823

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVIGAGNGGAAAAVELTQAGHNVTLYARSEETLAPFRRDGIRFAGVLGEGRVRPAAI
CEEEEEECCCCCCEEEEEEECCCCEEEEEECCCHHHCHHHHCCCEEEEEECCCCCCCHHH
TTGLGEAVRDQHAAVVALPTFAHAGVAQALHAAGWDARRPIILNPGHTGGALEVETVFRR
HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEHHHHHHH
LSAAVPPIVEFATLSYVARKPEPDFVNVTGRAKALRAAALPGCSDALEIACALFPGAYDT
HHHCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
GDVIASDLSNVNMVIHPPGAMLGAAWVEATGGDFTFYVQGMTPGVIGVMRGLDAERRAIA
HHHHHHHHCCCEEEEECCCHHHHHHHHEECCCCEEEEEECCCCHHHHHHHCCCHHHHHHH
RAFGHELPTIIAEMRAIGTVPPDAQDDDYLAIAAGEANRKIKAPDSLRHRYYMEDFAHGL
HHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
VPLLVYARLADVPTPTASALVELHASMTRDLPKPAMRDAAAMGLENATMDMLQRRAGIR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVLVIGAGNGGAAAAVELTQAGHNVTLYARSEETLAPFRRDGIRFAGVLGEGRVRPAAI
CEEEEEECCCCCCEEEEEEECCCCEEEEEECCCHHHCHHHHCCCEEEEEECCCCCCCHHH
TTGLGEAVRDQHAAVVALPTFAHAGVAQALHAAGWDARRPIILNPGHTGGALEVETVFRR
HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEHHHHHHH
LSAAVPPIVEFATLSYVARKPEPDFVNVTGRAKALRAAALPGCSDALEIACALFPGAYDT
HHHCCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC
GDVIASDLSNVNMVIHPPGAMLGAAWVEATGGDFTFYVQGMTPGVIGVMRGLDAERRAIA
HHHHHHHHCCCEEEEECCCHHHHHHHHEECCCCEEEEEECCCCHHHHHHHCCCHHHHHHH
RAFGHELPTIIAEMRAIGTVPPDAQDDDYLAIAAGEANRKIKAPDSLRHRYYMEDFAHGL
HHHCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
VPLLVYARLADVPTPTASALVELHASMTRDLPKPAMRDAAAMGLENATMDMLQRRAGIR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7487048; 2753861; 9665174 [H]