| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is argH1 [H]
Identifier: 110634734
GI number: 110634734
Start: 2547932
End: 2549431
Strand: Reverse
Name: argH1 [H]
Synonym: Meso_2392
Alternate gene names: 110634734
Gene position: 2549431-2547932 (Counterclockwise)
Preceding gene: 110634735
Following gene: 110634732
Centisome position: 57.78
GC content: 61.07
Gene sequence:
>1500_bases ATGTCCCTTGCACTAAACGAAGCACGGTTGGGCAAGGCTGCCCACCCCAGCCTCGTGGAGGCCATGTATGAGCCTCTCAT CGCGCAGGACATCGAGATGTTCGATGCTTATCTGGCCGTCGATCTGGCCCATGTCATCATGCTTGCCGACAGAGGCATCA TAGGGCCTGATCCGGCACGTGCCTTGGTCGGCGTCCTCTCGAAATTGCGGTCCGATGGGCCGGCATCGATCAAAATCGAC GCATCGTTCGGGGGCTTTCTGCTGCAGGTCGAGCGGCATATCGCGTCCGTATCCGGTCCGGATGCGGCGGGAATGCTTCA ACTGGGACGAAGCCGGATCGATCAGAACGCTGCCGTGGCCCGCGTCTACGCGCGCAATTCGCTCATCTCAGTCATGAATC AGCTCGTCGACCTCCAGGGCGTGGTGCTTGATCGCGCGCGGGAGTGGAAGGCGGTAATCATGCCTGGTTACACGCATTTG CAGCACGCGCAGCCCTGGGTGCTCGGACACTATCTTCTAGGCCAGCATGATGTCTTTCAACGCGATTTCCAACGGCTGGT CGGGGTCTACGGACGAACCAATCTGGGATCGCTGGGTGGGGTCGCCCTTTCAGGCACATCCTGGCCGATCGATAGGCGCT ACACGGCAGAGTTGCTGGGCCATGCGGGAATAGTTCGAAATTCGAAGGACGCGGGCAATTTCGTGATGGATCACCAGCCC GAGCTCGCTGCCATGCTCTCGATCCTGATGAGCGCGCTGGGACGTTTGGCATCGGAACTCTACATATGGTCGTCTTGGGA ATTCGGCCTCGTGGAACTGGATGAAAGCCTTTGTGGTACCTCCAGCATCATGCCGCAGAAGAAGAATCCCTATGCCCTGG AGCGTATTCGCGCCTTGGCGGGAGAGGCGATTGGTTGGCTGCCCGGCCAACTGGGGCTGTTCAAGACACCCACGACCAGC GATTGCGACCGCTCCTTCTCGTCCGGCATCACGCCCTGCTTCAAGGCCACGCGATGGGGCCTCCTGCTGATGAGCGAGGC GCTGCGCACGATGCGAATCGACGAAAACCGGATGAGGGAGCGCGCAGGGGCTTTCTGGAGCACAGCGAGCAACCTTGCCG ATCTCATCGTACGTGAAAGGGGGCTGGATTTCCGTCGCGCCCATCATGTGGTCGGCGCCCTGGTCAAGACGGCCGTTGCG GACGGGCTTCGGCCGAGCGATGTCGGAGCGGCAGAGGTCGACGCAGCGGCCAAGGCTGTGCTTAGCCGATCCCTGGACTT TACCGACGAGCAAATATCGACGGCTCTCAACTCCGCCGAATTCGTTGCCACGCGGGTGAGCGAAGGAAGCATCGGTCCGC AGGAAATAGAGAAGCAACTGAACCTGGCGATGGAGGATCATGCTGCCGCCCGTTCATGGATGGAGGAAGAGCGCGCCAGG CTGAGCGCCGCGGAAGACAGGCTGGCGGCGGCTGCGTCCCGCATCATAGCCGCTGCTTGA
Upstream 100 bases:
>100_bases AACGCGACGATGGATATGTTGCAAAGGCGCGCCGGGATCAGGTGAACCGCCGATCATCACTTGAGGCCGTGCCGGTGATT TGTGACGAGGAGTTGGAACC
Downstream 100 bases:
>100_bases CGCTCACCGGGGTATGGTCTCGCTTCGCTGGCCTACATAGCTCGCGCGCGGCCGGATGACCCGGCCGTCACTGTGCTGCT CAAGCGCGTGCGCGATCCAG
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL 1; Arginosuccinase 1 [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MSLALNEARLGKAAHPSLVEAMYEPLIAQDIEMFDAYLAVDLAHVIMLADRGIIGPDPARALVGVLSKLRSDGPASIKID ASFGGFLLQVERHIASVSGPDAAGMLQLGRSRIDQNAAVARVYARNSLISVMNQLVDLQGVVLDRAREWKAVIMPGYTHL QHAQPWVLGHYLLGQHDVFQRDFQRLVGVYGRTNLGSLGGVALSGTSWPIDRRYTAELLGHAGIVRNSKDAGNFVMDHQP ELAAMLSILMSALGRLASELYIWSSWEFGLVELDESLCGTSSIMPQKKNPYALERIRALAGEAIGWLPGQLGLFKTPTTS DCDRSFSSGITPCFKATRWGLLLMSEALRTMRIDENRMRERAGAFWSTASNLADLIVRERGLDFRRAHHVVGALVKTAVA DGLRPSDVGAAEVDAAAKAVLSRSLDFTDEQISTALNSAEFVATRVSEGSIGPQEIEKQLNLAMEDHAAARSWMEEERAR LSAAEDRLAAAASRIIAAA
Sequences:
>Translated_499_residues MSLALNEARLGKAAHPSLVEAMYEPLIAQDIEMFDAYLAVDLAHVIMLADRGIIGPDPARALVGVLSKLRSDGPASIKID ASFGGFLLQVERHIASVSGPDAAGMLQLGRSRIDQNAAVARVYARNSLISVMNQLVDLQGVVLDRAREWKAVIMPGYTHL QHAQPWVLGHYLLGQHDVFQRDFQRLVGVYGRTNLGSLGGVALSGTSWPIDRRYTAELLGHAGIVRNSKDAGNFVMDHQP ELAAMLSILMSALGRLASELYIWSSWEFGLVELDESLCGTSSIMPQKKNPYALERIRALAGEAIGWLPGQLGLFKTPTTS DCDRSFSSGITPCFKATRWGLLLMSEALRTMRIDENRMRERAGAFWSTASNLADLIVRERGLDFRRAHHVVGALVKTAVA DGLRPSDVGAAEVDAAAKAVLSRSLDFTDEQISTALNSAEFVATRVSEGSIGPQEIEKQLNLAMEDHAAARSWMEEERAR LSAAEDRLAAAASRIIAAA >Mature_498_residues SLALNEARLGKAAHPSLVEAMYEPLIAQDIEMFDAYLAVDLAHVIMLADRGIIGPDPARALVGVLSKLRSDGPASIKIDA SFGGFLLQVERHIASVSGPDAAGMLQLGRSRIDQNAAVARVYARNSLISVMNQLVDLQGVVLDRAREWKAVIMPGYTHLQ HAQPWVLGHYLLGQHDVFQRDFQRLVGVYGRTNLGSLGGVALSGTSWPIDRRYTAELLGHAGIVRNSKDAGNFVMDHQPE LAAMLSILMSALGRLASELYIWSSWEFGLVELDESLCGTSSIMPQKKNPYALERIRALAGEAIGWLPGQLGLFKTPTTSD CDRSFSSGITPCFKATRWGLLLMSEALRTMRIDENRMRERAGAFWSTASNLADLIVRERGLDFRRAHHVVGALVKTAVAD GLRPSDVGAAEVDAAAKAVLSRSLDFTDEQISTALNSAEFVATRVSEGSIGPQEIEKQLNLAMEDHAAARSWMEEERARL SAAEDRLAAAASRIIAAA
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily [H]
Homologues:
Organism=Homo sapiens, GI31541964, Length=315, Percent_Identity=33.015873015873, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI68303542, Length=315, Percent_Identity=33.015873015873, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI68303547, Length=313, Percent_Identity=31.9488817891374, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI68303549, Length=315, Percent_Identity=30.1587301587302, Blast_Score=110, Evalue=3e-24, Organism=Escherichia coli, GI1790398, Length=360, Percent_Identity=31.6666666666667, Blast_Score=166, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6321806, Length=326, Percent_Identity=34.6625766871166, Blast_Score=163, Evalue=5e-41, Organism=Drosophila melanogaster, GI221473854, Length=365, Percent_Identity=32.0547945205479, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI78706858, Length=365, Percent_Identity=32.0547945205479, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR008948 - InterPro: IPR022761 [H]
Pfam domain/function: PF00206 Lyase_1 [H]
EC number: =4.3.2.1 [H]
Molecular weight: Translated: 54209; Mature: 54077
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLALNEARLGKAAHPSLVEAMYEPLIAQDIEMFDAYLAVDLAHVIMLADRGIIGPDPAR CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ALVGVLSKLRSDGPASIKIDASFGGFLLQVERHIASVSGPDAAGMLQLGRSRIDQNAAVA HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH RVYARNSLISVMNQLVDLQGVVLDRAREWKAVIMPGYTHLQHAQPWVLGHYLLGQHDVFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHHCCHHHHH RDFQRLVGVYGRTNLGSLGGVALSGTSWPIDRRYTAELLGHAGIVRNSKDAGNFVMDHQP HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH ELAAMLSILMSALGRLASELYIWSSWEFGLVELDESLCGTSSIMPQKKNPYALERIRALA HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH GEAIGWLPGQLGLFKTPTTSDCDRSFSSGITPCFKATRWGLLLMSEALRTMRIDENRMRE HHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RAGAFWSTASNLADLIVRERGLDFRRAHHVVGALVKTAVADGLRPSDVGAAEVDAAAKAV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LSRSLDFTDEQISTALNSAEFVATRVSEGSIGPQEIEKQLNLAMEDHAAARSWMEEERAR HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSAAEDRLAAAASRIIAAA HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLALNEARLGKAAHPSLVEAMYEPLIAQDIEMFDAYLAVDLAHVIMLADRGIIGPDPAR CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ALVGVLSKLRSDGPASIKIDASFGGFLLQVERHIASVSGPDAAGMLQLGRSRIDQNAAVA HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH RVYARNSLISVMNQLVDLQGVVLDRAREWKAVIMPGYTHLQHAQPWVLGHYLLGQHDVFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCHHHHHHHHCCHHHHH RDFQRLVGVYGRTNLGSLGGVALSGTSWPIDRRYTAELLGHAGIVRNSKDAGNFVMDHQP HHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH ELAAMLSILMSALGRLASELYIWSSWEFGLVELDESLCGTSSIMPQKKNPYALERIRALA HHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH GEAIGWLPGQLGLFKTPTTSDCDRSFSSGITPCFKATRWGLLLMSEALRTMRIDENRMRE HHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RAGAFWSTASNLADLIVRERGLDFRRAHHVVGALVKTAVADGLRPSDVGAAEVDAAAKAV HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH LSRSLDFTDEQISTALNSAEFVATRVSEGSIGPQEIEKQLNLAMEDHAAARSWMEEERAR HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSAAEDRLAAAASRIIAAA HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA