BacMap

Definition	Mesorhizobium sp. BNC1, complete genome.
Accession	NC_008254
Length	4,412,446

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The map label for this gene is oppD [H]

Identifier: 110634726

GI number: 110634726

Start: 2539205

End: 2540245

Strand: Direct

Name: oppD [H]

Synonym: Meso_2384

Alternate gene names: 110634726

Gene position: 2539205-2540245 (Clockwise)

Preceding gene: 110634725

Following gene: 110634728

Centisome position: 57.55

GC content: 62.06

Gene sequence:

>1041_bases
ATGACGACAGCCAGCTCAAAACCATCTGCAAGCGCACCGCTGCTGTCAGTGCGGGACCTCTCTGTGCAATTCGCACGCAA
GGACGGAGGTCTGGCTCCCGCAGTTCGCTCGCTGTCGTTTGATCTGCGGCGCGGCGAAGTCCTTGCTCTGGTCGGCGAGT
CCGGATGCGGCAAATCGGCCACCGCGCTCGCGCTAATCGGGCTCCTTGCCCGAAATGCCCGGGTGGGCGGGAGCGTTGAG
TTCGACGGAAGAAACCTGCTCTCGCTGCCCGAGCGCGAATGGGAGACGATACGCGGCCGGCGGATCGCAATGATCTTCCA
GGATCCGATGACGGCGCTCGACCCGCTCTACCGCATCGGCGAACAGATAGCAGAGGCGCTGCGACGCCATCTCGATCTCT
CCTCCGTCGCTTTAAGGACCCGGGTCAACGAACTTCTCACGCTTGTCGGCATCGATGATCCCGAACTCAGAGTCCGCCAA
TTTCCACACCAGCTCTCCGGGGGGTTGCGCCAGCGGGTCGTGATCGCCATTGCCCTTGCCTGCAATCCGGAAGTCGTCAT
AGCCGACGAGCCGACCACAGCTCTGGATGTAACCATCCAAGCCCAGATCGTGAAGTTGCTGGCCGATCTCAACAGAAAGG
TCGGCATGGGCATGATCTTCATCTCACACGATCTTGGGGTGGTTTCACAGATCGCAGACAAGATCGCAGTGATGTATGCC
GGGCAGGTGGTGGAAAGCGGCCCCCGCGCCGAGTTGCTGCGCGACCCGAGGCACCCCTACACCAAGGCCCTGCTGGCGTC
GGTACCGAATCCTGCAATGGCGCCCAAGCAATTCCTGAACGCCATTCTGGGAACCGTACCCGACATGGCGCGTCTGGAGG
CTGGCTGCACTTTCCGCAACCGTTGCCCCCAAGCCCAAGAGGGCTGCCACGCCGAGCCCGGGCTCACCGGGATTTCGCCC
TCGCGGTTCGCACGCTGCTGGTTTGCTGAAACAGGGAGCTATGAGGGAATGGAACGGCAAGCAATCCGCCCATTCTCCTA
G

Upstream 100 bases:

>100_bases
GGCCCATCGTCTTTCCGTCGCTGATGATCTTTTTCGTGATCATGGCCGTCAACGTGCTGGGCGACTGGTTCCAAGACTAT
GTAAACCCCGAGGTGCGGCG

Downstream 100 bases:

>100_bases
CTGCGCAACCGCTAGAGTTCCAACGGTTGGAGCCCGTTAAAACGTGCTTTCTGAGTAAGCGCCTACCTCACATAGGGGCT
GGTGTGAAATCGCCATACAT

Product: oligopeptide/dipeptide ABC transporter, ATPase subunit

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KD [H]

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MTTASSKPSASAPLLSVRDLSVQFARKDGGLAPAVRSLSFDLRRGEVLALVGESGCGKSATALALIGLLARNARVGGSVE
FDGRNLLSLPEREWETIRGRRIAMIFQDPMTALDPLYRIGEQIAEALRRHLDLSSVALRTRVNELLTLVGIDDPELRVRQ
FPHQLSGGLRQRVVIAIALACNPEVVIADEPTTALDVTIQAQIVKLLADLNRKVGMGMIFISHDLGVVSQIADKIAVMYA
GQVVESGPRAELLRDPRHPYTKALLASVPNPAMAPKQFLNAILGTVPDMARLEAGCTFRNRCPQAQEGCHAEPGLTGISP
SRFARCWFAETGSYEGMERQAIRPFS

Sequences:

>Translated_346_residues
MTTASSKPSASAPLLSVRDLSVQFARKDGGLAPAVRSLSFDLRRGEVLALVGESGCGKSATALALIGLLARNARVGGSVE
FDGRNLLSLPEREWETIRGRRIAMIFQDPMTALDPLYRIGEQIAEALRRHLDLSSVALRTRVNELLTLVGIDDPELRVRQ
FPHQLSGGLRQRVVIAIALACNPEVVIADEPTTALDVTIQAQIVKLLADLNRKVGMGMIFISHDLGVVSQIADKIAVMYA
GQVVESGPRAELLRDPRHPYTKALLASVPNPAMAPKQFLNAILGTVPDMARLEAGCTFRNRCPQAQEGCHAEPGLTGISP
SRFARCWFAETGSYEGMERQAIRPFS
>Mature_345_residues
TTASSKPSASAPLLSVRDLSVQFARKDGGLAPAVRSLSFDLRRGEVLALVGESGCGKSATALALIGLLARNARVGGSVEF
DGRNLLSLPEREWETIRGRRIAMIFQDPMTALDPLYRIGEQIAEALRRHLDLSSVALRTRVNELLTLVGIDDPELRVRQF
PHQLSGGLRQRVVIAIALACNPEVVIADEPTTALDVTIQAQIVKLLADLNRKVGMGMIFISHDLGVVSQIADKIAVMYAG
QVVESGPRAELLRDPRHPYTKALLASVPNPAMAPKQFLNAILGTVPDMARLEAGCTFRNRCPQAQEGCHAEPGLTGISPS
RFARCWFAETGSYEGMERQAIRPFS

Specific function: Part of the binding protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system. Required for sporulation and competence [H]

COG id: COG0444

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9665248, Length=268, Percent_Identity=30.5970149253731, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI42741659, Length=268, Percent_Identity=29.1044776119403, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI148612844, Length=239, Percent_Identity=34.3096234309623, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI255708477, Length=268, Percent_Identity=33.2089552238806, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI9961252, Length=226, Percent_Identity=33.1858407079646, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4505771, Length=226, Percent_Identity=33.1858407079646, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI9961250, Length=229, Percent_Identity=33.1877729257642, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI134142335, Length=249, Percent_Identity=28.9156626506024, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI134142337, Length=249, Percent_Identity=28.9156626506024, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI171184400, Length=260, Percent_Identity=31.1538461538462, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI150417984, Length=247, Percent_Identity=27.9352226720648, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI42490749, Length=254, Percent_Identity=29.1338582677165, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI46592964, Length=277, Percent_Identity=30.3249097472924, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI46592971, Length=277, Percent_Identity=30.3249097472924, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI46592915, Length=277, Percent_Identity=30.3249097472924, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI46592956, Length=277, Percent_Identity=30.3249097472924, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI46592898, Length=277, Percent_Identity=30.3249097472924, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI46592978, Length=277, Percent_Identity=30.3249097472924, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI215820660, Length=246, Percent_Identity=28.8617886178862, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI20143975, Length=246, Percent_Identity=28.8617886178862, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI156105685, Length=231, Percent_Identity=32.034632034632, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI48994883, Length=314, Percent_Identity=47.7707006369427, Blast_Score=297, Evalue=6e-82,
Organism=Escherichia coli, GI1789963, Length=317, Percent_Identity=46.3722397476341, Blast_Score=277, Evalue=7e-76,
Organism=Escherichia coli, GI1787759, Length=324, Percent_Identity=43.2098765432099, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI145693107, Length=267, Percent_Identity=49.063670411985, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1787500, Length=307, Percent_Identity=42.9967426710098, Blast_Score=230, Evalue=9e-62,
Organism=Escherichia coli, GI1787548, Length=324, Percent_Identity=41.9753086419753, Blast_Score=230, Evalue=9e-62,
Organism=Escherichia coli, GI1788506, Length=259, Percent_Identity=45.1737451737452, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1789962, Length=304, Percent_Identity=36.5131578947368, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1787758, Length=325, Percent_Identity=36.6153846153846, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1787547, Length=257, Percent_Identity=36.9649805447471, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1789890, Length=254, Percent_Identity=35.8267716535433, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI48994997, Length=263, Percent_Identity=34.9809885931559, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1789891, Length=239, Percent_Identity=36.4016736401674, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786398, Length=235, Percent_Identity=37.0212765957447, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI87081791, Length=273, Percent_Identity=32.967032967033, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789032, Length=244, Percent_Identity=33.1967213114754, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1787370, Length=264, Percent_Identity=28.030303030303, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788450, Length=237, Percent_Identity=30.8016877637131, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1788761, Length=242, Percent_Identity=28.099173553719, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790162, Length=269, Percent_Identity=27.1375464684015, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=34.7826086956522, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081709, Length=254, Percent_Identity=26.7716535433071, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789873, Length=214, Percent_Identity=35.5140186915888, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787712, Length=237, Percent_Identity=32.0675105485232, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1787029, Length=255, Percent_Identity=29.8039215686275, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790467, Length=251, Percent_Identity=29.4820717131474, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786872, Length=218, Percent_Identity=30.2752293577982, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786703, Length=206, Percent_Identity=34.4660194174757, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788225, Length=234, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789586, Length=245, Percent_Identity=31.0204081632653, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87082267, Length=245, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787089, Length=220, Percent_Identity=32.2727272727273, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787105, Length=239, Percent_Identity=31.7991631799163, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1789672, Length=263, Percent_Identity=27.7566539923954, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788644, Length=266, Percent_Identity=29.3233082706767, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786563, Length=225, Percent_Identity=30.2222222222222, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI48994943, Length=247, Percent_Identity=28.7449392712551, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790739, Length=244, Percent_Identity=30.327868852459, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI48995001, Length=219, Percent_Identity=30.5936073059361, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786803, Length=230, Percent_Identity=29.5652173913043, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787792, Length=249, Percent_Identity=30.1204819277108, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786345, Length=253, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=28.2407407407407, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788472, Length=244, Percent_Identity=26.2295081967213, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1788053, Length=189, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=27.1111111111111, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787972, Length=252, Percent_Identity=30.5555555555556, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789991, Length=215, Percent_Identity=27.906976744186, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787112, Length=259, Percent_Identity=29.7297297297297, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788002, Length=235, Percent_Identity=30.2127659574468, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790544, Length=249, Percent_Identity=27.3092369477912, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790525, Length=234, Percent_Identity=27.3504273504274, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789593, Length=225, Percent_Identity=28, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789864, Length=254, Percent_Identity=26.3779527559055, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786981, Length=237, Percent_Identity=29.535864978903, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788210, Length=243, Percent_Identity=30.0411522633745, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787143, Length=240, Percent_Identity=28.3333333333333, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786653, Length=226, Percent_Identity=28.3185840707965, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=250, Percent_Identity=35.2, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI193202349, Length=244, Percent_Identity=31.5573770491803, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI193209708, Length=260, Percent_Identity=32.3076923076923, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI71992290, Length=251, Percent_Identity=31.4741035856574, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193208177, Length=266, Percent_Identity=29.3233082706767, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17558664, Length=259, Percent_Identity=30.8880308880309, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI212646699, Length=233, Percent_Identity=30.0429184549356, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193211015, Length=248, Percent_Identity=30.6451612903226, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=236, Percent_Identity=30.9322033898305, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=248, Percent_Identity=30.6451612903226, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71984940, Length=252, Percent_Identity=29.3650793650794, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=246, Percent_Identity=29.6747967479675, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17567265, Length=229, Percent_Identity=33.1877729257642, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17511077, Length=232, Percent_Identity=31.8965517241379, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115534520, Length=243, Percent_Identity=28.3950617283951, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17567269, Length=254, Percent_Identity=30.7086614173228, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17569143, Length=237, Percent_Identity=29.535864978903, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=260, Percent_Identity=30.3846153846154, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=243, Percent_Identity=30.8641975308642, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=260, Percent_Identity=30, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17539902, Length=249, Percent_Identity=24.4979919678715, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=241, Percent_Identity=30.7053941908714, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=246, Percent_Identity=28.0487804878049, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17552010, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=243, Percent_Identity=31.6872427983539, Blast_Score=73, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6322640, Length=247, Percent_Identity=29.5546558704453, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324498, Length=274, Percent_Identity=26.6423357664234, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319856, Length=246, Percent_Identity=28.4552845528455, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI85726357, Length=259, Percent_Identity=30.8880308880309, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24641565, Length=227, Percent_Identity=32.5991189427313, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI161076682, Length=246, Percent_Identity=29.6747967479675, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI161076684, Length=246, Percent_Identity=29.6747967479675, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581617, Length=246, Percent_Identity=29.6747967479675, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581615, Length=246, Percent_Identity=29.6747967479675, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI17136662, Length=224, Percent_Identity=33.0357142857143, Blast_Score=79, Evalue=6e-15,
Organism=Drosophila melanogaster, GI28574533, Length=210, Percent_Identity=30.4761904761905, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281363262, Length=225, Percent_Identity=32, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24653245, Length=225, Percent_Identity=32, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI19920532, Length=240, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24580930, Length=240, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI23397593, Length=226, Percent_Identity=33.1858407079646, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24659289, Length=249, Percent_Identity=30.9236947791165, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24643674, Length=238, Percent_Identity=23.109243697479, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 37512; Mature: 37381

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTASSKPSASAPLLSVRDLSVQFARKDGGLAPAVRSLSFDLRRGEVLALVGESGCGKSA
CCCCCCCCCCCCCEEEEHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
TALALIGLLARNARVGGSVEFDGRNLLSLPEREWETIRGRRIAMIFQDPMTALDPLYRIG
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
EQIAEALRRHLDLSSVALRTRVNELLTLVGIDDPELRVRQFPHQLSGGLRQRVVIAIALA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHEEEEEEEEE
CNPEVVIADEPTTALDVTIQAQIVKLLADLNRKVGMGMIFISHDLGVVSQIADKIAVMYA
CCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH
GQVVESGPRAELLRDPRHPYTKALLASVPNPAMAPKQFLNAILGTVPDMARLEAGCTFRN
HHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCHHH
RCPQAQEGCHAEPGLTGISPSRFARCWFAETGSYEGMERQAIRPFS
CCCCHHCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
TTASSKPSASAPLLSVRDLSVQFARKDGGLAPAVRSLSFDLRRGEVLALVGESGCGKSA
CCCCCCCCCCCCEEEEHHHHHEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
TALALIGLLARNARVGGSVEFDGRNLLSLPEREWETIRGRRIAMIFQDPMTALDPLYRIG
HHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
EQIAEALRRHLDLSSVALRTRVNELLTLVGIDDPELRVRQFPHQLSGGLRQRVVIAIALA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHEEEEEEEEE
CNPEVVIADEPTTALDVTIQAQIVKLLADLNRKVGMGMIFISHDLGVVSQIADKIAVMYA
CCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH
GQVVESGPRAELLRDPRHPYTKALLASVPNPAMAPKQFLNAILGTVPDMARLEAGCTFRN
HHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCHHH
RCPQAQEGCHAEPGLTGISPSRFARCWFAETGSYEGMERQAIRPFS
CCCCHHCCCCCCCCCCCCCHHHHHEEEEECCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]