| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is gsiB [H]
Identifier: 110634718
GI number: 110634718
Start: 2528875
End: 2530419
Strand: Direct
Name: gsiB [H]
Synonym: Meso_2375
Alternate gene names: 110634718
Gene position: 2528875-2530419 (Clockwise)
Preceding gene: 110634710
Following gene: 110634720
Centisome position: 57.31
GC content: 58.25
Gene sequence:
>1545_bases ATGGTGAATCGCCGGCAACTGATGTTTGGGGCCGCAGCCATGGGATTAACCGGCTCGCTCGCATTTCGGGCTTACGCTCA GAGTGCAGCGGCAGGCGAAGGCACACTTACTTTCGGAACGCTTGGTCTTCTCGCCGGGCTTGATCCGCATGTTGCCGCCA GCTCGGTGTGGCGCAAGACCACGACGATGATTTACGATCGGCTGCTCGGCTACGACACGACTGGAAAGTTGCAGGGCGAG CTCGCCGAAAGCTGGGAGTTCAGCGATCCGACCACCTTCGTCGTCAAGCTGAAACCGGGCGTGACCTTCCACAAGGGGCA GCGGTTCAGTGCCGCAGACGTCGTTTACACGTTCTCGCGTATACAGGATCCTGCGGTGGGTGCGACGTTAGCAAAGCCGC TGGAGGGCGTCGAAGTGGAATCGCGTGATGACGCGACCGTTGTCTTCAAGCTGCCGCAACCCGACGTGAGTTTTCCAAGC CTGCTCGCCTCGGAAGAGGTGGCGATCGTTTCAGCCGAATGGATGGCCGGTTCGCCGAACGTCTCGGTTGAAGCGAACGG AACCGGTCCATTCATGCTCGAAAGCTTCGATCCGAAAGTCCAGACGGTGGTCAAGCGCAATCCCGACTTCTATGATGGTC CGGCCAAGCTGGAAAGCATCATCTTCCGCTCGATCGCCGACGACAGCGCTCGAATAAACGCGCTCAAGACCGGCAGTGTG GATCTGATCGACACAGTCCCATGGAATCAGATCGATGGTTTGAAGAATGCGCCCGGATTAACTGTGTTCTCGGCGCCGGC AGCATTCATGAGCCTTTGGTGCAACGTCTCTCGTCCGGTAATGGCCGACCCGAGAGTCCGTCGCGCAATCGCCTATGCGA TCGACCGCAACGCAGTGTCGACGGCAGCCTTTTTTGGCTACGGCGCGCCATTGGGCGGGCTTCCCATGCCGGAGACGTCG CCTTTTCATAATCCGGAATCGGCAGAAATCTTCAACTACGATCCGGAAAAGGCACGTGCTCTGTTGAAGGAAGCCGGCGC GGAAGGACTGGAGATCGAATTCCTCGTCTCTCAGGCTCCGGCAGTCTATGTGGTGGTGGGGCAGATCGTCGCCGCGAATC TGGCTGCGGTGGGCATCAAGGCGAATATCCAGTTGGTTGATTTCCCCACCGTGGTCGAGCGGAAGAACTCTGGCAACTAC GATCTCGTTATCTATGGCACGAACATCCGCGGCCCAGACCCGAACCTTGCCTATTCCTATTTCTTCGAGCCTGGTACCGG CTTCTGGGCTAACGGCGCCAAGTTCCAGGACCCCAAGGTGAGTGATCTCCTGGCGAGGGGCCGGTCCGAACTCGACTCCG AGAAGCGGAAGGAAGTCTACAAGGAGCTCGAACTTTACCTGCTGGAGATCAGCCCTTGGATCTTCATCACCTGGCGCGAC GACGCCATGGCATACAAATCATCGCTGCAGGGAATGGCACATCTCGAGGGAGCTCTGAACGTCGTCAGCGTTTCCATTTC CGCACCGCACCTATTCTGGTCATAA
Upstream 100 bases:
>100_bases ATTGACCTCTCGATCGCGCCCTTGACAACAGCACCACTCATCCATTAATAGAAACACTGTAACGATAATAGCAACAATAT GCCAGGTAGGGGACTTTCAA
Downstream 100 bases:
>100_bases TGACCCCGACAGGGCCGGACGCATTGTGCGTCCGGTTCCTTTGGCGAGAGTGACCATGACTGCATCTGAAACAGTTCTCC AGGTCAAGAACCTGAGCATG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MVNRRQLMFGAAAMGLTGSLAFRAYAQSAAAGEGTLTFGTLGLLAGLDPHVAASSVWRKTTTMIYDRLLGYDTTGKLQGE LAESWEFSDPTTFVVKLKPGVTFHKGQRFSAADVVYTFSRIQDPAVGATLAKPLEGVEVESRDDATVVFKLPQPDVSFPS LLASEEVAIVSAEWMAGSPNVSVEANGTGPFMLESFDPKVQTVVKRNPDFYDGPAKLESIIFRSIADDSARINALKTGSV DLIDTVPWNQIDGLKNAPGLTVFSAPAAFMSLWCNVSRPVMADPRVRRAIAYAIDRNAVSTAAFFGYGAPLGGLPMPETS PFHNPESAEIFNYDPEKARALLKEAGAEGLEIEFLVSQAPAVYVVVGQIVAANLAAVGIKANIQLVDFPTVVERKNSGNY DLVIYGTNIRGPDPNLAYSYFFEPGTGFWANGAKFQDPKVSDLLARGRSELDSEKRKEVYKELELYLLEISPWIFITWRD DAMAYKSSLQGMAHLEGALNVVSVSISAPHLFWS
Sequences:
>Translated_514_residues MVNRRQLMFGAAAMGLTGSLAFRAYAQSAAAGEGTLTFGTLGLLAGLDPHVAASSVWRKTTTMIYDRLLGYDTTGKLQGE LAESWEFSDPTTFVVKLKPGVTFHKGQRFSAADVVYTFSRIQDPAVGATLAKPLEGVEVESRDDATVVFKLPQPDVSFPS LLASEEVAIVSAEWMAGSPNVSVEANGTGPFMLESFDPKVQTVVKRNPDFYDGPAKLESIIFRSIADDSARINALKTGSV DLIDTVPWNQIDGLKNAPGLTVFSAPAAFMSLWCNVSRPVMADPRVRRAIAYAIDRNAVSTAAFFGYGAPLGGLPMPETS PFHNPESAEIFNYDPEKARALLKEAGAEGLEIEFLVSQAPAVYVVVGQIVAANLAAVGIKANIQLVDFPTVVERKNSGNY DLVIYGTNIRGPDPNLAYSYFFEPGTGFWANGAKFQDPKVSDLLARGRSELDSEKRKEVYKELELYLLEISPWIFITWRD DAMAYKSSLQGMAHLEGALNVVSVSISAPHLFWS >Mature_514_residues MVNRRQLMFGAAAMGLTGSLAFRAYAQSAAAGEGTLTFGTLGLLAGLDPHVAASSVWRKTTTMIYDRLLGYDTTGKLQGE LAESWEFSDPTTFVVKLKPGVTFHKGQRFSAADVVYTFSRIQDPAVGATLAKPLEGVEVESRDDATVVFKLPQPDVSFPS LLASEEVAIVSAEWMAGSPNVSVEANGTGPFMLESFDPKVQTVVKRNPDFYDGPAKLESIIFRSIADDSARINALKTGSV DLIDTVPWNQIDGLKNAPGLTVFSAPAAFMSLWCNVSRPVMADPRVRRAIAYAIDRNAVSTAAFFGYGAPLGGLPMPETS PFHNPESAEIFNYDPEKARALLKEAGAEGLEIEFLVSQAPAVYVVVGQIVAANLAAVGIKANIQLVDFPTVVERKNSGNY DLVIYGTNIRGPDPNLAYSYFFEPGTGFWANGAKFQDPKVSDLLARGRSELDSEKRKEVYKELELYLLEISPWIFITWRD DAMAYKSSLQGMAHLEGALNVVSVSISAPHLFWS
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=506, Percent_Identity=29.2490118577075, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI1789966, Length=496, Percent_Identity=26.8145161290323, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1787762, Length=519, Percent_Identity=24.2774566473988, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1787551, Length=494, Percent_Identity=26.3157894736842, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1789887, Length=448, Percent_Identity=22.3214285714286, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1787495, Length=512, Percent_Identity=22.4609375, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1789397, Length=463, Percent_Identity=21.5982721382289, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI87081878, Length=466, Percent_Identity=22.5321888412017, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 55750; Mature: 55750
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNRRQLMFGAAAMGLTGSLAFRAYAQSAAAGEGTLTFGTLGLLAGLDPHVAASSVWRKT CCCCCEEEHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHH TTMIYDRLLGYDTTGKLQGELAESWEFSDPTTFVVKLKPGVTFHKGQRFSAADVVYTFSR HHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHH IQDPAVGATLAKPLEGVEVESRDDATVVFKLPQPDVSFPSLLASEEVAIVSAEWMAGSPN CCCCCCCHHHHCCCCCCEECCCCCCEEEEECCCCCCCCHHHHCCCCEEEEEEEEECCCCC VSVEANGTGPFMLESFDPKVQTVVKRNPDFYDGPAKLESIIFRSIADDSARINALKTGSV EEEEECCCCCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCE DLIDTVPWNQIDGLKNAPGLTVFSAPAAFMSLWCNVSRPVMADPRVRRAIAYAIDRNAVS EEEECCCCHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHH TAAFFGYGAPLGGLPMPETSPFHNPESAEIFNYDPEKARALLKEAGAEGLEIEFLVSQAP HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEEECCCC AVYVVVGQIVAANLAAVGIKANIQLVDFPTVVERKNSGNYDLVIYGTNIRGPDPNLAYSY EEEEEHHHHHHHHHHEEEEEEEEEEEECCHHHCCCCCCCEEEEEEECCCCCCCCCCEEEE FFEPGTGFWANGAKFQDPKVSDLLARGRSELDSEKRKEVYKELELYLLEISPWIFITWRD EECCCCCCCCCCCCCCCCCHHHHHHCCHHHCCHHHHHHHHHHHEEEEEEECCEEEEEECC DAMAYKSSLQGMAHLEGALNVVSVSISAPHLFWS HHHHHHHHHCHHHHHCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MVNRRQLMFGAAAMGLTGSLAFRAYAQSAAAGEGTLTFGTLGLLAGLDPHVAASSVWRKT CCCCCEEEHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCHHHHHHHHHH TTMIYDRLLGYDTTGKLQGELAESWEFSDPTTFVVKLKPGVTFHKGQRFSAADVVYTFSR HHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHH IQDPAVGATLAKPLEGVEVESRDDATVVFKLPQPDVSFPSLLASEEVAIVSAEWMAGSPN CCCCCCCHHHHCCCCCCEECCCCCCEEEEECCCCCCCCHHHHCCCCEEEEEEEEECCCCC VSVEANGTGPFMLESFDPKVQTVVKRNPDFYDGPAKLESIIFRSIADDSARINALKTGSV EEEEECCCCCEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCE DLIDTVPWNQIDGLKNAPGLTVFSAPAAFMSLWCNVSRPVMADPRVRRAIAYAIDRNAVS EEEECCCCHHCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHH TAAFFGYGAPLGGLPMPETSPFHNPESAEIFNYDPEKARALLKEAGAEGLEIEFLVSQAP HHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCEEEEEECCCC AVYVVVGQIVAANLAAVGIKANIQLVDFPTVVERKNSGNYDLVIYGTNIRGPDPNLAYSY EEEEEHHHHHHHHHHEEEEEEEEEEEECCHHHCCCCCCCEEEEEEECCCCCCCCCCEEEE FFEPGTGFWANGAKFQDPKVSDLLARGRSELDSEKRKEVYKELELYLLEISPWIFITWRD EECCCCCCCCCCCCCCCCCHHHHHHCCHHHCCHHHHHHHHHHHEEEEEEECCEEEEEECC DAMAYKSSLQGMAHLEGALNVVSVSISAPHLFWS HHHHHHHHHCHHHHHCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA