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The map label for this gene is potH [H]

Identifier: 110634714

GI number: 110634714

Start: 2524057

End: 2524884

Strand: Reverse

Name: potH [H]

Synonym: Meso_2371

Alternate gene names: 110634714

Gene position: 2524884-2524057 (Counterclockwise)

Preceding gene: 110634715

Following gene: 110634713

Centisome position: 57.22

GC content: 56.88

Gene sequence:

>828_bases
TTGTACTTTATACTGCCATTGCTGATCTATATGGCCGCCGTCTTCCTGTTGCCATTGCTGTTCGTGCTGTTCACCAGCGT
GGTGTCCGAAACCAGCGGCCAGCTCACGCTGGAGTTCTTCGAGCGGTTCTTCACGCACGGCCTTTATCTGCGTGTCTTGA
AGACCACGTTGGAGATCTCGCTGATCGGGACGGCGCTCACGCTGCTGATCGCGTATCCGATAGCCTACTACCTCGCCAAG
CAGACGCCGAAACGGCGCTCGTATCTGACGCTGCTTATCCTGCTGCCCTTTTATACGAGCATTTTGGTGAAGGCCTTCGC
CTTCATGGTGGTGCTGGGCTACAACGGTGTCGTCAATGATGCCATCCGTTTGGTGCTGGGCGAAGACTTCGTTTTGCCGC
TGCTGTTCAATCGTTTTGGCGTCATGATCGGCGTGGTCCATGACATGGTGCCGTTCATGGTCTTTCCGATTGTGATCAAT
CTGCTGGCCCAGAACTCCTCGATCCACAAGGCGGCAGAGATCATGGGCGCGACCAGGACCCGCATCTTCTGGTCCATCAT
CTTTCCGCTCAGTTTGCCCGCGGTGGCTGCCGGAAGCCTGCTGGTGATCATTCGCCTCATGGGGCAGTTCGTTACGCCGG
CGCTGCTCGGCGGACGCACCGACATAATGATGTCGAACCTGATCAGCTTTCACATCAAGGATGCGCTGGACTGGAACATG
GCTGCGGCCGTTTCCATCGTTCTGCTGCTCCTGTCATGTCTGATTTTGCTTGCCCTCACCCGGGTGAGGGGGGCTCAACT
GTTTGGGGAGCAGCCGCGCCATGGATAA

Upstream 100 bases:

>100_bases
ATTGCGGGCGAGCGTCGGCTCGCCCGTTTCTCAATGTAAACACCGCCGCCCCGTCTGACGGCGGGCGCCGCCTTGCAAGC
CACTTTGCGCCGAGGGACAA

Downstream 100 bases:

>100_bases
AGAACGCGACGTTGAGGCGCTGGGCGGCTCGGCGCCATCCCCCCTGGTCGCCACCGCCGCTTGGCTGGGGTTCGTCTACC
TTCTCCTCCCAAGCCTCATC

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MYFILPLLIYMAAVFLLPLLFVLFTSVVSETSGQLTLEFFERFFTHGLYLRVLKTTLEISLIGTALTLLIAYPIAYYLAK
QTPKRRSYLTLLILLPFYTSILVKAFAFMVVLGYNGVVNDAIRLVLGEDFVLPLLFNRFGVMIGVVHDMVPFMVFPIVIN
LLAQNSSIHKAAEIMGATRTRIFWSIIFPLSLPAVAAGSLLVIIRLMGQFVTPALLGGRTDIMMSNLISFHIKDALDWNM
AAAVSIVLLLLSCLILLALTRVRGAQLFGEQPRHG

Sequences:

>Translated_275_residues
MYFILPLLIYMAAVFLLPLLFVLFTSVVSETSGQLTLEFFERFFTHGLYLRVLKTTLEISLIGTALTLLIAYPIAYYLAK
QTPKRRSYLTLLILLPFYTSILVKAFAFMVVLGYNGVVNDAIRLVLGEDFVLPLLFNRFGVMIGVVHDMVPFMVFPIVIN
LLAQNSSIHKAAEIMGATRTRIFWSIIFPLSLPAVAAGSLLVIIRLMGQFVTPALLGGRTDIMMSNLISFHIKDALDWNM
AAAVSIVLLLLSCLILLALTRVRGAQLFGEQPRHG
>Mature_275_residues
MYFILPLLIYMAAVFLLPLLFVLFTSVVSETSGQLTLEFFERFFTHGLYLRVLKTTLEISLIGTALTLLIAYPIAYYLAK
QTPKRRSYLTLLILLPFYTSILVKAFAFMVVLGYNGVVNDAIRLVLGEDFVLPLLFNRFGVMIGVVHDMVPFMVFPIVIN
LLAQNSSIHKAAEIMGATRTRIFWSIIFPLSLPAVAAGSLLVIIRLMGQFVTPALLGGRTDIMMSNLISFHIKDALDWNM
AAAVSIVLLLLSCLILLALTRVRGAQLFGEQPRHG

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=232, Percent_Identity=35.7758620689655, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787369, Length=250, Percent_Identity=31.6, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787713, Length=254, Percent_Identity=25.5905511811024, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30647; Mature: 30647

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFILPLLIYMAAVFLLPLLFVLFTSVVSETSGQLTLEFFERFFTHGLYLRVLKTTLEIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIGTALTLLIAYPIAYYLAKQTPKRRSYLTLLILLPFYTSILVKAFAFMVVLGYNGVVND
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AIRLVLGEDFVLPLLFNRFGVMIGVVHDMVPFMVFPIVINLLAQNSSIHKAAEIMGATRT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RIFWSIIFPLSLPAVAAGSLLVIIRLMGQFVTPALLGGRTDIMMSNLISFHIKDALDWNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHH
AAAVSIVLLLLSCLILLALTRVRGAQLFGEQPRHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYFILPLLIYMAAVFLLPLLFVLFTSVVSETSGQLTLEFFERFFTHGLYLRVLKTTLEIS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIGTALTLLIAYPIAYYLAKQTPKRRSYLTLLILLPFYTSILVKAFAFMVVLGYNGVVND
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AIRLVLGEDFVLPLLFNRFGVMIGVVHDMVPFMVFPIVINLLAQNSSIHKAAEIMGATRT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
RIFWSIIFPLSLPAVAAGSLLVIIRLMGQFVTPALLGGRTDIMMSNLISFHIKDALDWNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHH
AAAVSIVLLLLSCLILLALTRVRGAQLFGEQPRHG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]