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The map label for this gene is 110634620

Identifier: 110634620

GI number: 110634620

Start: 2426481

End: 2426810

Strand: Direct

Name: 110634620

Synonym: Meso_2274

Alternate gene names: NA

Gene position: 2426481-2426810 (Clockwise)

Preceding gene: 110634618

Following gene: 110634621

Centisome position: 54.99

GC content: 60.91

Gene sequence:

>330_bases
ATGCAAAGCCCGCCGAAAGTAACATTCCGCAACATGGAACGATCGGACGCGATCGAGGGCCATGTGATGCGCCGTGTCGA
GGAGGTCGAAAAGTGCTTCGACCGTGTCATCGGCTGTGACGTCGTCATCGAGGCGGCACAGAAGAGGAAGCTCTCGGGGC
GCGCTTTCAAGGTGCATGTCGCTCTGCAGATTCCGGGCCCGGACGTCGTCGTGACGCGTCTGGTTGCTCGAAGCAAAGCC
GCCGAAAACGTCAACCTCGCCATCCATGAGGCGTTCAGCGCCGCGACGCGGCGGCTCCTCGCGCGCAAAGATCAGATGAC
AGGTCATTGA

Upstream 100 bases:

>100_bases
CGAAACGGCGTGTCCCGCCACCGTCCGCGCATGCGTTGATCTCAATCAATGTCCCTACCCGGCGAGCCTCTAGGCTTTGC
AGCCGAATATGGAGACCGAT

Downstream 100 bases:

>100_bases
GTACCAGCCTGAAGCGGCAATGTTGAAGGAACCTCACGATTGGGAGCCGGACCCATGGCGATCACGCCCGAACAATGCCA
AGCCGCACGAATCCTGACAC

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: Cold-Shock Domain-Containing Protein; Sigma-54 Modulation Protein; SSU Ribosomal Modulation Protein

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MQSPPKVTFRNMERSDAIEGHVMRRVEEVEKCFDRVIGCDVVIEAAQKRKLSGRAFKVHVALQIPGPDVVVTRLVARSKA
AENVNLAIHEAFSAATRRLLARKDQMTGH

Sequences:

>Translated_109_residues
MQSPPKVTFRNMERSDAIEGHVMRRVEEVEKCFDRVIGCDVVIEAAQKRKLSGRAFKVHVALQIPGPDVVVTRLVARSKA
AENVNLAIHEAFSAATRRLLARKDQMTGH
>Mature_109_residues
MQSPPKVTFRNMERSDAIEGHVMRRVEEVEKCFDRVIGCDVVIEAAQKRKLSGRAFKVHVALQIPGPDVVVTRLVARSKA
AENVNLAIHEAFSAATRRLLARKDQMTGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12191; Mature: 12191

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPPKVTFRNMERSDAIEGHVMRRVEEVEKCFDRVIGCDVVIEAAQKRKLSGRAFKVHV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ALQIPGPDVVVTRLVARSKAAENVNLAIHEAFSAATRRLLARKDQMTGH
EEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQSPPKVTFRNMERSDAIEGHVMRRVEEVEKCFDRVIGCDVVIEAAQKRKLSGRAFKVHV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ALQIPGPDVVVTRLVARSKAAENVNLAIHEAFSAATRRLLARKDQMTGH
EEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA