| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634618
Identifier: 110634618
GI number: 110634618
Start: 2424664
End: 2425677
Strand: Direct
Name: 110634618
Synonym: Meso_2272
Alternate gene names: NA
Gene position: 2424664-2425677 (Clockwise)
Preceding gene: 110634617
Following gene: 110634620
Centisome position: 54.95
GC content: 60.65
Gene sequence:
>1014_bases ATGGAACGCGTCATACCGATCAGGACAGGCATCAAGGCGGGAACGGCGGCCGGTTTCATCGTCATCGGCGTTCTCCTCTA CCTTCTTCTCCTTGCCGGCTCCGAATACCTCGTCCATCGCAACGGCCACATGAACCCGATCTTCAAGATCGACGCTGCGG ATCGCGAGCGCTTCGACTGGGTGATCCTCGGTGCGTCTCACGCCATGCCGCTCGATTTCGGCGACTTCAACAGCGAGATG GAGGAACAAACCGGCGCCAGTATCCTCAACCTTGCGGGGCCCGGCACCGGACCTCTCTACAACCGCTTCGTTCTGGAACA TTTCCTGCGGGAGCATTCAACGGACAACATCCTCTATGTGGCGGACGGCTTCGCCTTCCGCTCGCCCATGTGGAACGAGG ATCGCCTTGCCGACGGCGCGTTGCTGGCCAGGACACCCTTCCATCTGCCGCTCGCATTAAGTCTCGTGGGCTACGTCCTT GCTGAAGGCGTCGATCCCCGCGCGCTTCTCGACTATCTGACCGGCTTTTCAAAGCTCAACAACCGGGAGCGCTTCCGCCC CGATATCTGGGAAGGAGAGATGATCTTCGACCGCACCTTCAAACCGTCCGCCTTGGCCGAGAGGAAGCGGGCTGAATACC TCCACCCAGCGGTCGCGGATGAGGAGGCCGCGCGCGAGCGTTACCTTGAAGAGTTCGCCGAACTCGTCGAGCTGGCGAAG CAGAACAGAGCCAGGGTCGTGGTGGCCAAGTTCCCACTGCCTTCGCGCTTTGCGGCGCTGCTGCCGAACGAGGCGGAGTT CAATGCCGCATTGCAGTCGCGGGCGGTGCAGTACGGCTTCACGTTCATGGATTTCTCCGGCGCGATGGACGAGCCGCAAT TCTACGCCGACACGGATCATCTCAATCGTGCCGGCGTGACGGAATTCTTTGAGCGGCATCTTAAGCCGATCCTCGCTCGG AAGCAGGCTCCGCTCAATTCGTCTTGGGATAGCCAATTGGCTGGACGAAGGTGA
Upstream 100 bases:
>100_bases CGCTGCGATGGGGCGCCTACTACGCGGGCATTTTCACCCTGGTGCTCCTCGGCCGCTGGCAGGCGGGCGAATTCATCTAC ATGCAGTTCTGAGGTTCGTC
Downstream 100 bases:
>100_bases CCAGCTTCGTGTCGGGCAGCCTCAAGAGCGCCTTGAGCCCCTCCTTGTCCGCGCCGCCTACCAGGCACGTTCCGAGCCCG GCGGACGCACAGTATAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MERVIPIRTGIKAGTAAGFIVIGVLLYLLLLAGSEYLVHRNGHMNPIFKIDAADRERFDWVILGASHAMPLDFGDFNSEM EEQTGASILNLAGPGTGPLYNRFVLEHFLREHSTDNILYVADGFAFRSPMWNEDRLADGALLARTPFHLPLALSLVGYVL AEGVDPRALLDYLTGFSKLNNRERFRPDIWEGEMIFDRTFKPSALAERKRAEYLHPAVADEEAARERYLEEFAELVELAK QNRARVVVAKFPLPSRFAALLPNEAEFNAALQSRAVQYGFTFMDFSGAMDEPQFYADTDHLNRAGVTEFFERHLKPILAR KQAPLNSSWDSQLAGRR
Sequences:
>Translated_337_residues MERVIPIRTGIKAGTAAGFIVIGVLLYLLLLAGSEYLVHRNGHMNPIFKIDAADRERFDWVILGASHAMPLDFGDFNSEM EEQTGASILNLAGPGTGPLYNRFVLEHFLREHSTDNILYVADGFAFRSPMWNEDRLADGALLARTPFHLPLALSLVGYVL AEGVDPRALLDYLTGFSKLNNRERFRPDIWEGEMIFDRTFKPSALAERKRAEYLHPAVADEEAARERYLEEFAELVELAK QNRARVVVAKFPLPSRFAALLPNEAEFNAALQSRAVQYGFTFMDFSGAMDEPQFYADTDHLNRAGVTEFFERHLKPILAR KQAPLNSSWDSQLAGRR >Mature_337_residues MERVIPIRTGIKAGTAAGFIVIGVLLYLLLLAGSEYLVHRNGHMNPIFKIDAADRERFDWVILGASHAMPLDFGDFNSEM EEQTGASILNLAGPGTGPLYNRFVLEHFLREHSTDNILYVADGFAFRSPMWNEDRLADGALLARTPFHLPLALSLVGYVL AEGVDPRALLDYLTGFSKLNNRERFRPDIWEGEMIFDRTFKPSALAERKRAEYLHPAVADEEAARERYLEEFAELVELAK QNRARVVVAKFPLPSRFAALLPNEAEFNAALQSRAVQYGFTFMDFSGAMDEPQFYADTDHLNRAGVTEFFERHLKPILAR KQAPLNSSWDSQLAGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38037; Mature: 38037
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVIPIRTGIKAGTAAGFIVIGVLLYLLLLAGSEYLVHRNGHMNPIFKIDAADRERFDW CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCCE VILGASHAMPLDFGDFNSEMEEQTGASILNLAGPGTGPLYNRFVLEHFLREHSTDNILYV EEEECCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE ADGFAFRSPMWNEDRLADGALLARTPFHLPLALSLVGYVLAEGVDPRALLDYLTGFSKLN ECCCEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC NRERFRPDIWEGEMIFDRTFKPSALAERKRAEYLHPAVADEEAARERYLEEFAELVELAK CCHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QNRARVVVAKFPLPSRFAALLPNEAEFNAALQSRAVQYGFTFMDFSGAMDEPQFYADTDH CCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCEECCCCC LNRAGVTEFFERHLKPILARKQAPLNSSWDSQLAGRR CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC >Mature Secondary Structure MERVIPIRTGIKAGTAAGFIVIGVLLYLLLLAGSEYLVHRNGHMNPIFKIDAADRERFDW CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCCE VILGASHAMPLDFGDFNSEMEEQTGASILNLAGPGTGPLYNRFVLEHFLREHSTDNILYV EEEECCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEE ADGFAFRSPMWNEDRLADGALLARTPFHLPLALSLVGYVLAEGVDPRALLDYLTGFSKLN ECCCEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC NRERFRPDIWEGEMIFDRTFKPSALAERKRAEYLHPAVADEEAARERYLEEFAELVELAK CCHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH QNRARVVVAKFPLPSRFAALLPNEAEFNAALQSRAVQYGFTFMDFSGAMDEPQFYADTDH CCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCEECCCCC LNRAGVTEFFERHLKPILARKQAPLNSSWDSQLAGRR CCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA