Click here to switch to the map view.

The map label for this gene is 110634584

Identifier: 110634584

GI number: 110634584

Start: 2388345

End: 2390747

Strand: Reverse

Name: 110634584

Synonym: Meso_2236

Alternate gene names: NA

Gene position: 2390747-2388345 (Counterclockwise)

Preceding gene: 110634587

Following gene: 110634583

Centisome position: 54.18

GC content: 63.09

Gene sequence:

>2403_bases
ATGGATGTTGCCAAAACCGATGTCGGGACACCGAGCTTGTCAGAGTTTGAGGCGATCGACCGTTATTGGAGAGCGGCAAA
CTATATCTCGGTGGGCCAGATCTATCTCATGGACAACCCGCTGCTCCGCGAGCCGCTCACGGCGGAGCATGTCAAGCCCC
GGCTTCTGGGGCATTGGGGAACGACGCCGGGTCTGAACTTCGTCTACGTCCATCTGAACCGGGTCATCCGTGCGCGCGAC
CTGAACGTGATCTATGTCTGCGGTCCGGGGCACGGCGGCCCCGCGATGGTGGCCAACACCTATCTCGAAGGGACATACAG
CGAGATCTATCCGGATGTGCCCCAGGATGCGGAAGGCCTGAGAAGACTATTCCGCCAGTTCTCCTTTCCTGGCGGGGTTC
CCAGCCATGCTGCCCCGGAAACACCGGGCTCGATTCATGAGGGCGGAGAACTCGGCTACGCGCTGGCGCACGCCTACGGC
GCCGCTTTCGACAACCCCGACTTGCTGGTTGCGTGCGTGGTCGGCGACGGCGAGGCGGAAACCGGTCCCACCGCCGCCGC
GTGGCATTCCAACAAGTTCCTCAACCCGGCGCGAGACGGTGCCGTTCTGCCTGTTCTCCACTTGAACGGCTACAAGATCG
CCAATCCCACGATCCTCGGCCGGATGGAAGACGAGGAACTGCGCGCTCTCTTCACCGGCTATGGATATGAGCCGTTCTTC
GTGGAAGGCAGCGAGCCCGCCGAAATGCACCCGCTGATGGCGCGGACGCTCGACACGGCGCTCGACCGCATCTCCGCCAT
TCAGCAGCAGGCACGCGATCCGGCGTGGTCGGGAGAGCGCCTTCGCTGGCCCATGATCGTCCTGCGCAGCCCGAAGGGCT
GGACCGGGCCGAAAGAGGTGGACGGCAAGAAGGTCGAGGACTTCTGGCGTTCGCACCAGGTGCCGGTTGCCAACGCGCGG
GGCAATGACGAGCACCGGCGCGTGCTGCAGGACTGGATGCTGAGCTACAAGGCGCAGGAACTGTTCGACGAGAGCGGGCG
CCTTCGGCCGGAACTTGCGGCTCTCGCGCCTTCGGGAAACAAGCGCATGGGCGCCAATCCCCATGCCAATGGCGGGCTTC
TGAAGCGCGACCTCGTCCTGCCGGACTGGAAGGCATACGCCCTCGACGTGCGGCAGCCGGGAGGATTGAAGGGCGAGGCC
ACGCGCGTGATGGGCACCTATCTACGCGACGTGATGAAGCTCAACGTGGATAATTTCAGGCTGATGGGGCCGGACGAGAC
ATCGTCCAACCGGCTCGACGCCGTCTTCGATGTTACCGATCGTGTCTGGATGGAGAGGATCGAGCCCTACGACGTGCACC
TGACGCGCGACGGCCGTGTCATGGAGGTGTTGAGCGAACATCTCTGTCAGGGCTGGCTGGAGGGCTATCTGCTAACCGGC
CGGCATGGGCTCTTCTCCTGCTATGAAGCCTTCATCCATATCGTGGATTCCATGGTCAACCAGCACGCCAAATGGGTGAA
GGTCTCGCGCGAGCTCTCCTGGCGCAAGCCGATCGCTTCGCTCAATTACCTGCTTACCTCCCATGTCTGGAGGCAGGACC
ACAACGGCTTCAGCCATCAGGATCCCGGGTTCGCCGATTTCGTCGCCAACAAGAAGGCGGATACGATCCGCCTCTACTTC
CCGCCCGACGCGAACACCCTGCTGTGGGTGACCGACCACTGCCTCAAGACCTACAACCGCATCAACGTCATCACGGCCGG
CAAGCAGCCGGCGCCGCAATGGCTGAGCGCCGATGAGGCCGAGATCCACTGCAGGGCAGGGGCGGGCGTCTGGGAATGGG
CGGGGACGGTGGCTCGGGACGAAGAACCGGATGTGGTCATGGCCTGCGCCGGCGACGTGCCGACGCTGGAGACGCTGGCG
GCCGTGGATATTCTGCGCACGGATTTCCCTGACCTGAAGATCCGCGTCGTCAATGTGGTCGACCTGATGACGCTGCAATC
GGCGACAGAGCATCCGCATGGCCTTGACGATCAGGGCTTCGACGCCCTGTTCACGACGGACAAACCGGTGATCTTCGCCT
ATCACGGCTATCCCTATCTCATCCACCGCTTGACCTACAAACGCGCCAACCACGACAACATGCATGTGCACGGCTTTCGC
GAGGAAGGCACGACCACCACGCCCTTCGATATGGTCGTCATGAATTCGCTCGACCGGTTCCATCTCGCCATTGCCGCCGC
CACTCGCGTGACGCGGCTGGACGTCAAGGCGGACGAACTGGTCGCACGGCTCAACGACAAGCTCGTTGAGCACGCCGCCT
ATATCCGCCAGCACGGCGAGGACATGCCCGAGATCCGCGATTGGGGGTGGCCCTACAAGACGGCCGCCGAAGCCGGTGAC
TGA

Upstream 100 bases:

>100_bases
ACCGATCAACGTCTCCTCCGGGCGGACGTGGCATGTCTTTTCGCGAAAGCCTTTTCGTTCCGTGCCGCTGCCCCAGATTT
CTGCCGTGAGGAGTGCTCAA

Downstream 100 bases:

>100_bases
TGCCGAATACCATCCTCGCTCTCAATGCCGGCTCCTCGAGCCTCAAGTTCGGTCTCTACGAGGCTGGCTCTTCAGGAGAA
CCGCGCTCCATGGCCCGTGG

Product: putative phosphoketolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 800; Mature: 800

Protein sequence:

>800_residues
MDVAKTDVGTPSLSEFEAIDRYWRAANYISVGQIYLMDNPLLREPLTAEHVKPRLLGHWGTTPGLNFVYVHLNRVIRARD
LNVIYVCGPGHGGPAMVANTYLEGTYSEIYPDVPQDAEGLRRLFRQFSFPGGVPSHAAPETPGSIHEGGELGYALAHAYG
AAFDNPDLLVACVVGDGEAETGPTAAAWHSNKFLNPARDGAVLPVLHLNGYKIANPTILGRMEDEELRALFTGYGYEPFF
VEGSEPAEMHPLMARTLDTALDRISAIQQQARDPAWSGERLRWPMIVLRSPKGWTGPKEVDGKKVEDFWRSHQVPVANAR
GNDEHRRVLQDWMLSYKAQELFDESGRLRPELAALAPSGNKRMGANPHANGGLLKRDLVLPDWKAYALDVRQPGGLKGEA
TRVMGTYLRDVMKLNVDNFRLMGPDETSSNRLDAVFDVTDRVWMERIEPYDVHLTRDGRVMEVLSEHLCQGWLEGYLLTG
RHGLFSCYEAFIHIVDSMVNQHAKWVKVSRELSWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFADFVANKKADTIRLYF
PPDANTLLWVTDHCLKTYNRINVITAGKQPAPQWLSADEAEIHCRAGAGVWEWAGTVARDEEPDVVMACAGDVPTLETLA
AVDILRTDFPDLKIRVVNVVDLMTLQSATEHPHGLDDQGFDALFTTDKPVIFAYHGYPYLIHRLTYKRANHDNMHVHGFR
EEGTTTTPFDMVVMNSLDRFHLAIAAATRVTRLDVKADELVARLNDKLVEHAAYIRQHGEDMPEIRDWGWPYKTAAEAGD

Sequences:

>Translated_800_residues
MDVAKTDVGTPSLSEFEAIDRYWRAANYISVGQIYLMDNPLLREPLTAEHVKPRLLGHWGTTPGLNFVYVHLNRVIRARD
LNVIYVCGPGHGGPAMVANTYLEGTYSEIYPDVPQDAEGLRRLFRQFSFPGGVPSHAAPETPGSIHEGGELGYALAHAYG
AAFDNPDLLVACVVGDGEAETGPTAAAWHSNKFLNPARDGAVLPVLHLNGYKIANPTILGRMEDEELRALFTGYGYEPFF
VEGSEPAEMHPLMARTLDTALDRISAIQQQARDPAWSGERLRWPMIVLRSPKGWTGPKEVDGKKVEDFWRSHQVPVANAR
GNDEHRRVLQDWMLSYKAQELFDESGRLRPELAALAPSGNKRMGANPHANGGLLKRDLVLPDWKAYALDVRQPGGLKGEA
TRVMGTYLRDVMKLNVDNFRLMGPDETSSNRLDAVFDVTDRVWMERIEPYDVHLTRDGRVMEVLSEHLCQGWLEGYLLTG
RHGLFSCYEAFIHIVDSMVNQHAKWVKVSRELSWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFADFVANKKADTIRLYF
PPDANTLLWVTDHCLKTYNRINVITAGKQPAPQWLSADEAEIHCRAGAGVWEWAGTVARDEEPDVVMACAGDVPTLETLA
AVDILRTDFPDLKIRVVNVVDLMTLQSATEHPHGLDDQGFDALFTTDKPVIFAYHGYPYLIHRLTYKRANHDNMHVHGFR
EEGTTTTPFDMVVMNSLDRFHLAIAAATRVTRLDVKADELVARLNDKLVEHAAYIRQHGEDMPEIRDWGWPYKTAAEAGD
>Mature_800_residues
MDVAKTDVGTPSLSEFEAIDRYWRAANYISVGQIYLMDNPLLREPLTAEHVKPRLLGHWGTTPGLNFVYVHLNRVIRARD
LNVIYVCGPGHGGPAMVANTYLEGTYSEIYPDVPQDAEGLRRLFRQFSFPGGVPSHAAPETPGSIHEGGELGYALAHAYG
AAFDNPDLLVACVVGDGEAETGPTAAAWHSNKFLNPARDGAVLPVLHLNGYKIANPTILGRMEDEELRALFTGYGYEPFF
VEGSEPAEMHPLMARTLDTALDRISAIQQQARDPAWSGERLRWPMIVLRSPKGWTGPKEVDGKKVEDFWRSHQVPVANAR
GNDEHRRVLQDWMLSYKAQELFDESGRLRPELAALAPSGNKRMGANPHANGGLLKRDLVLPDWKAYALDVRQPGGLKGEA
TRVMGTYLRDVMKLNVDNFRLMGPDETSSNRLDAVFDVTDRVWMERIEPYDVHLTRDGRVMEVLSEHLCQGWLEGYLLTG
RHGLFSCYEAFIHIVDSMVNQHAKWVKVSRELSWRKPIASLNYLLTSHVWRQDHNGFSHQDPGFADFVANKKADTIRLYF
PPDANTLLWVTDHCLKTYNRINVITAGKQPAPQWLSADEAEIHCRAGAGVWEWAGTVARDEEPDVVMACAGDVPTLETLA
AVDILRTDFPDLKIRVVNVVDLMTLQSATEHPHGLDDQGFDALFTTDKPVIFAYHGYPYLIHRLTYKRANHDNMHVHGFR
EEGTTTTPFDMVVMNSLDRFHLAIAAATRVTRLDVKADELVARLNDKLVEHAAYIRQHGEDMPEIRDWGWPYKTAAEAGD

Specific function: Unknown

COG id: COG3957

COG function: function code G; Phosphoketolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the XFP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009014
- InterPro:   IPR005593
- InterPro:   IPR018969
- InterPro:   IPR019790
- InterPro:   IPR018970
- InterPro:   IPR019789 [H]

Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]

EC number: NA

Molecular weight: Translated: 89788; Mature: 89788

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVAKTDVGTPSLSEFEAIDRYWRAANYISVGQIYLMDNPLLREPLTAEHVKPRLLGHWG
CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECEEEEECCCHHCCCCCHHHCCCHHEECCC
TTPGLNFVYVHLNRVIRARDLNVIYVCGPGHGGPAMVANTYLEGTYSEIYPDVPQDAEGL
CCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHCCCCCCCHHHH
RRLFRQFSFPGGVPSHAAPETPGSIHEGGELGYALAHAYGAAFDNPDLLVACVVGDGEAE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
TGPTAAAWHSNKFLNPARDGAVLPVLHLNGYKIANPTILGRMEDEELRALFTGYGYEPFF
CCCCEEEECCCCCCCCCCCCCEEEEEEECCEEECCCEEEECCCHHHHHHHHHCCCCCEEE
VEGSEPAEMHPLMARTLDTALDRISAIQQQARDPAWSGERLRWPMIVLRSPKGWTGPKEV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCC
DGKKVEDFWRSHQVPVANARGNDEHRRVLQDWMLSYKAQELFDESGRLRPELAALAPSGN
CCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCC
KRMGANPHANGGLLKRDLVLPDWKAYALDVRQPGGLKGEATRVMGTYLRDVMKLNVDNFR
CCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
LMGPDETSSNRLDAVFDVTDRVWMERIEPYDVHLTRDGRVMEVLSEHLCQGWLEGYLLTG
EECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEC
RHGLFSCYEAFIHIVDSMVNQHAKWVKVSRELSWRKPIASLNYLLTSHVWRQDHNGFSHQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
DPGFADFVANKKADTIRLYFPPDANTLLWVTDHCLKTYNRINVITAGKQPAPQWLSADEA
CCCHHHHHCCCCCCEEEEEECCCCCEEEEEEHHHHHHHCCEEEEECCCCCCCHHCCCCCC
EIHCRAGAGVWEWAGTVARDEEPDVVMACAGDVPTLETLAAVDILRTDFPDLKIRVVNVV
EEEEECCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEHH
DLMTLQSATEHPHGLDDQGFDALFTTDKPVIFAYHGYPYLIHRLTYKRANHDNMHVHGFR
HHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEC
EEGTTTTPFDMVVMNSLDRFHLAIAAATRVTRLDVKADELVARLNDKLVEHAAYIRQHGE
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
DMPEIRDWGWPYKTAAEAGD
CCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDVAKTDVGTPSLSEFEAIDRYWRAANYISVGQIYLMDNPLLREPLTAEHVKPRLLGHWG
CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECEEEEECCCHHCCCCCHHHCCCHHEECCC
TTPGLNFVYVHLNRVIRARDLNVIYVCGPGHGGPAMVANTYLEGTYSEIYPDVPQDAEGL
CCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHCCCCCCCHHHH
RRLFRQFSFPGGVPSHAAPETPGSIHEGGELGYALAHAYGAAFDNPDLLVACVVGDGEAE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
TGPTAAAWHSNKFLNPARDGAVLPVLHLNGYKIANPTILGRMEDEELRALFTGYGYEPFF
CCCCEEEECCCCCCCCCCCCCEEEEEEECCEEECCCEEEECCCHHHHHHHHHCCCCCEEE
VEGSEPAEMHPLMARTLDTALDRISAIQQQARDPAWSGERLRWPMIVLRSPKGWTGPKEV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEECCCCCCCCCCC
DGKKVEDFWRSHQVPVANARGNDEHRRVLQDWMLSYKAQELFDESGRLRPELAALAPSGN
CCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCC
KRMGANPHANGGLLKRDLVLPDWKAYALDVRQPGGLKGEATRVMGTYLRDVMKLNVDNFR
CCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
LMGPDETSSNRLDAVFDVTDRVWMERIEPYDVHLTRDGRVMEVLSEHLCQGWLEGYLLTG
EECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEC
RHGLFSCYEAFIHIVDSMVNQHAKWVKVSRELSWRKPIASLNYLLTSHVWRQDHNGFSHQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCC
DPGFADFVANKKADTIRLYFPPDANTLLWVTDHCLKTYNRINVITAGKQPAPQWLSADEA
CCCHHHHHCCCCCCEEEEEECCCCCEEEEEEHHHHHHHCCEEEEECCCCCCCHHCCCCCC
EIHCRAGAGVWEWAGTVARDEEPDVVMACAGDVPTLETLAAVDILRTDFPDLKIRVVNVV
EEEEECCCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEHH
DLMTLQSATEHPHGLDDQGFDALFTTDKPVIFAYHGYPYLIHRLTYKRANHDNMHVHGFR
HHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEC
EEGTTTTPFDMVVMNSLDRFHLAIAAATRVTRLDVKADELVARLNDKLVEHAAYIRQHGE
CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
DMPEIRDWGWPYKTAAEAGD
CCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]