| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634558
Identifier: 110634558
GI number: 110634558
Start: 2358078
End: 2359262
Strand: Reverse
Name: 110634558
Synonym: Meso_2209
Alternate gene names: NA
Gene position: 2359262-2358078 (Counterclockwise)
Preceding gene: 110634559
Following gene: 110634555
Centisome position: 53.47
GC content: 61.43
Gene sequence:
>1185_bases GTGATTGAAAACACCCTTTTCTTCGCTCTCGGTTTCCTGGTCTCGGCGACTCTCGCGCTGTTCCTGTCGCCTGTCCTGTG GCGCCGCGCGGGCGAGCTCATGCGCCGTCGCATCGAGGCGACCCTGCCGATGACGCGCGAGGAGCTGGAGGCCGAGATCG ATGCCGTCAAGGCCGAGCATGTGATGGCCATGCGCCTTCTCGAGATGAAGAACGAATCCCTGAGAAGAAAAGCGGCGGAC GATCTCGTTGAACTGAATGTCCTGCGGGAGAAGGTGGAGAAGCTGAAGGAATATGATGCGGCGATGGTCGCGCTGGAGGC GGAACGCAACGATCTTACGGCGCAGCTTGCCGAACGGGATGCGGAACTGCAGAAGAGGGCGAAAAAGATCGCGCAGTTGG AGCGCCAACTTCAGAAGCGCGAGAGGGAGATTGAAGAGCTTTCAAGCCTGTATGAGGAAGCAAGCCTGACGGCGAGCACA CGGCAGATCGATCTGGTGGCGCGGGAAGCCAGCATTGAGCAGCTCAACGACTCCGTCAGTCTCCTGCGCACCCAGCGCAA GGAAGCTGACCGGCTGATCCGCGACGCGATGGCGAAAAAGGCGGCCGCCGACGAGGCGCTGCTTATCGAGCGAGCTCGTG CCGACGATCTGGAACGCAAGCTGGACAGCATGATTGCCGCTCTTTCCACCCGTGAGGAGAAGCTCGAACGCAGGGAGAAA GAGTTGGCGCGCTTGAAGCGGAAGCTCGAAGCTATGGATGACAACAACACCGAAACGGAAGACGTGGGTGAAGAGAGGGC GCGGCTCGAAGCGCAGGTCGCCGAGCTTTCGTTGAAGCTTTCATCCTTGCTGGCCCCCAAAGGGAGGGGTGGAAAGCCAT CAGCCCTTCGAAAGCCAGAGATGGAACGGCTGCAGTCTCGGCTCGCCGTGCTGATGCGCGAGAACAAGAGACTTCGCGCG GAACTCGCCGGGGCCGCCCACAGCGATCAGGCGGACGACGGAGCGCTGCGCGAACGTGTTTCGGACCTCGCGGCCAATAT GGTTGATGTGGTGGCCACATTGGAAGGCCCGGATTCGCCAATCGAAAAAGCACTCTCCCAGCAGGAACCGAACGGGAAGG ACGATCGGCCGCTTAGCCTTGCCGATCGCGTGAGGAGTTTGCGCGGCCGCTCGGCGGCGGGGTGA
Upstream 100 bases:
>100_bases GCGGCCGACTTGGAATCCCTTCTGATATGCAAATAAGCAACTGAATTTCTGGCGTCGTCATGGCACACTACTGAAACCAA CGCCCCCGGATCCTTCGCCC
Downstream 100 bases:
>100_bases TCATCGCCACAGCCGATGAAGAGCAATGGCAGTGGCCGCTGCGACGTTGAGGCTATCGAAATCATTTCGCATCGGAATTC GTACGGAGGGCAAGCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MIENTLFFALGFLVSATLALFLSPVLWRRAGELMRRRIEATLPMTREELEAEIDAVKAEHVMAMRLLEMKNESLRRKAAD DLVELNVLREKVEKLKEYDAAMVALEAERNDLTAQLAERDAELQKRAKKIAQLERQLQKREREIEELSSLYEEASLTAST RQIDLVAREASIEQLNDSVSLLRTQRKEADRLIRDAMAKKAAADEALLIERARADDLERKLDSMIAALSTREEKLERREK ELARLKRKLEAMDDNNTETEDVGEERARLEAQVAELSLKLSSLLAPKGRGGKPSALRKPEMERLQSRLAVLMRENKRLRA ELAGAAHSDQADDGALRERVSDLAANMVDVVATLEGPDSPIEKALSQQEPNGKDDRPLSLADRVRSLRGRSAAG
Sequences:
>Translated_394_residues MIENTLFFALGFLVSATLALFLSPVLWRRAGELMRRRIEATLPMTREELEAEIDAVKAEHVMAMRLLEMKNESLRRKAAD DLVELNVLREKVEKLKEYDAAMVALEAERNDLTAQLAERDAELQKRAKKIAQLERQLQKREREIEELSSLYEEASLTAST RQIDLVAREASIEQLNDSVSLLRTQRKEADRLIRDAMAKKAAADEALLIERARADDLERKLDSMIAALSTREEKLERREK ELARLKRKLEAMDDNNTETEDVGEERARLEAQVAELSLKLSSLLAPKGRGGKPSALRKPEMERLQSRLAVLMRENKRLRA ELAGAAHSDQADDGALRERVSDLAANMVDVVATLEGPDSPIEKALSQQEPNGKDDRPLSLADRVRSLRGRSAAG >Mature_394_residues MIENTLFFALGFLVSATLALFLSPVLWRRAGELMRRRIEATLPMTREELEAEIDAVKAEHVMAMRLLEMKNESLRRKAAD DLVELNVLREKVEKLKEYDAAMVALEAERNDLTAQLAERDAELQKRAKKIAQLERQLQKREREIEELSSLYEEASLTAST RQIDLVAREASIEQLNDSVSLLRTQRKEADRLIRDAMAKKAAADEALLIERARADDLERKLDSMIAALSTREEKLERREK ELARLKRKLEAMDDNNTETEDVGEERARLEAQVAELSLKLSSLLAPKGRGGKPSALRKPEMERLQSRLAVLMRENKRLRA ELAGAAHSDQADDGALRERVSDLAANMVDVVATLEGPDSPIEKALSQQEPNGKDDRPLSLADRVRSLRGRSAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44420; Mature: 44420
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIENTLFFALGFLVSATLALFLSPVLWRRAGELMRRRIEATLPMTREELEAEIDAVKAEH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VMAMRLLEMKNESLRRKAADDLVELNVLREKVEKLKEYDAAMVALEAERNDLTAQLAERD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELQKRAKKIAQLERQLQKREREIEELSSLYEEASLTASTRQIDLVAREASIEQLNDSVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRTQRKEADRLIRDAMAKKAAADEALLIERARADDLERKLDSMIAALSTREEKLERREK HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELARLKRKLEAMDDNNTETEDVGEERARLEAQVAELSLKLSSLLAPKGRGGKPSALRKPE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH MERLQSRLAVLMRENKRLRAELAGAAHSDQADDGALRERVSDLAANMVDVVATLEGPDSP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH IEKALSQQEPNGKDDRPLSLADRVRSLRGRSAAG HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MIENTLFFALGFLVSATLALFLSPVLWRRAGELMRRRIEATLPMTREELEAEIDAVKAEH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VMAMRLLEMKNESLRRKAADDLVELNVLREKVEKLKEYDAAMVALEAERNDLTAQLAERD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AELQKRAKKIAQLERQLQKREREIEELSSLYEEASLTASTRQIDLVAREASIEQLNDSVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLRTQRKEADRLIRDAMAKKAAADEALLIERARADDLERKLDSMIAALSTREEKLERREK HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELARLKRKLEAMDDNNTETEDVGEERARLEAQVAELSLKLSSLLAPKGRGGKPSALRKPE HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH MERLQSRLAVLMRENKRLRAELAGAAHSDQADDGALRERVSDLAANMVDVVATLEGPDSP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH IEKALSQQEPNGKDDRPLSLADRVRSLRGRSAAG HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA