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The map label for this gene is rnk [C]

Identifier: 110634552

GI number: 110634552

Start: 2351719

End: 2352249

Strand: Direct

Name: rnk [C]

Synonym: Meso_2203

Alternate gene names: 110634552

Gene position: 2351719-2352249 (Clockwise)

Preceding gene: 110634551

Following gene: 110634556

Centisome position: 53.3

GC content: 59.13

Gene sequence:

>531_bases
GTGTGGGGAAAACGGGGCTGTACGCTTACAACAAGGGACTTTGAGACACTCCAGCAGATGTTCGAGGAACATCGCGACCG
CAACGAAGCGATGACCATGCTTTTGCGTCACAAGCTTGAAACGGCGCGCGTGACGCGGCCGGAAGTCACACCGGACGACG
TCGTGACGCTCAACAGCCGCATCAGCTTTCGCGTGGGTAACGGTATGCCGGAGACACGCATAATATGCCGTGACCGGTCG
CGCGGTCCGCTCGGCTATTTCCTGCCGATCACGACCATACGCGGACTGGCGCTATTGGGATTGACTGAAGGACAGATGAC
ACCCGTTTCCCGAGGCCGGTCGCTCGTCGAAATCCTTCAGGTAACCGCCATCCACTATCAGCCGGAGCGCGCCGCAAGAA
TAAGGGACTTGGATGCAGCTAAGGGCTCCAGGTTCCGCGTTAGCGAAGGTGGAAATCAGGCGGAAACCGGCCTTCACCAG
AAGTCTCTAAAGCGTCCGGACGGAGATGATCCGGGCCCAAACGCGGCCTGA

Upstream 100 bases:

>100_bases
CGGCAACAAGCCCCTGCGCCGATAAACGCTGGCGCAGGGGTGGTCTCACCAGTTTGTCAACTTACGGTCCGCGCCAAACC
GCGGGGCCTTGGAGATTGTC

Downstream 100 bases:

>100_bases
CCTATTGTTCTGATTAAAAAAGACCTTCTATGTAGCCGGCCTCATTGAGAAATATCTTCTCGGCCGAGGGCGCGCGCGGC
AGGCCCGGCATGGTCATGAT

Product: GreA/GreB family elongation factor

Products: NA

Alternate protein names: Nucleoside Diphosphate Kinase Regulator Rnk

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MWGKRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSRISFRVGNGMPETRIICRDRS
RGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQVTAIHYQPERAARIRDLDAAKGSRFRVSEGGNQAETGLHQ
KSLKRPDGDDPGPNAA

Sequences:

>Translated_176_residues
MWGKRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSRISFRVGNGMPETRIICRDRS
RGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQVTAIHYQPERAARIRDLDAAKGSRFRVSEGGNQAETGLHQ
KSLKRPDGDDPGPNAA
>Mature_176_residues
MWGKRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSRISFRVGNGMPETRIICRDRS
RGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQVTAIHYQPERAARIRDLDAAKGSRFRVSEGGNQAETGLHQ
KSLKRPDGDDPGPNAA

Specific function: Rnk And Sspa Can Functionally Replace P.Aeruginosa Alginate Regulatory Gene Algr2. [C]

COG id: COG0782

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19755; Mature: 19755

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGKRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSR
CCCCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCE
ISFRVGNGMPETRIICRDRSRGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQ
EEEEECCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
VTAIHYQPERAARIRDLDAAKGSRFRVSEGGNQAETGLHQKSLKRPDGDDPGPNAA
HHHHEECCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MWGKRGCTLTTRDFETLQQMFEEHRDRNEAMTMLLRHKLETARVTRPEVTPDDVVTLNSR
CCCCCCCEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCE
ISFRVGNGMPETRIICRDRSRGPLGYFLPITTIRGLALLGLTEGQMTPVSRGRSLVEILQ
EEEEECCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
VTAIHYQPERAARIRDLDAAKGSRFRVSEGGNQAETGLHQKSLKRPDGDDPGPNAA
HHHHEECCHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA