| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634546
Identifier: 110634546
GI number: 110634546
Start: 2345231
End: 2345647
Strand: Direct
Name: 110634546
Synonym: Meso_2197
Alternate gene names: NA
Gene position: 2345231-2345647 (Clockwise)
Preceding gene: 110634545
Following gene: 110634550
Centisome position: 53.15
GC content: 59.23
Gene sequence:
>417_bases ATGCGTTACATGATGCTGATGATCCCGAAAGGCTACGAAGCGGCCGAGCCCGGCACTCTTCCAGAGGCCGATGCCGTCGG GCCGATGATGCACTACAACGAGGAACTTCAGAAGGCTGGCATCCTCGTTTCCGCGGAAGGTCTGCACCCACCCTCCATGG GTGCGCGGGTCTCCTTCGCACATGGCCTTCCGGAGGTGACAGACGGCCCGTTCGCCGAGGCTAAGGAAGTGTTGGGCGGC TTCTGGATCATTGATGTAGGCTCGCTGGAAGAGGCGATCGAATGGGCCAAGCGCTGCCCCGGCAGCCCCAATGAGACCAT CGAGATCCGGAAGATCATGGAGATGGACGATTTTCCGGAGGACTTACGTGCAGTGGCAGATGGCTTCGAGACGATGCAGA CCAAGAAGGCGAAATAA
Upstream 100 bases:
>100_bases CTACCTTTCCTCGTCCTTTGGTTGCCGGGCGGCAGCGCACCTCGCTATTTTGCTGTTACGCTGTGCCGGCAATCACGAGG CCAATCGTTAGGAGCAAACG
Downstream 100 bases:
>100_bases GCTTCGCCCCTCTCAAGCGTGCTTGGCCTTATGCGCCGGCTCCACATGGATGACAACGCGCGTTCCCGGCATCTCCCTGC CCAGCGCGTGTTCGATGCGG
Product: DGPFAETKE domain-containing protein
Products: NA
Alternate protein names: YCII-Related Protein; YCII-Like Protein; YCII-Related; DGPF Domain-Containing Protein; DGPFAETKE Domain-Containing Protein; Dgpfaetke Family Protein; Dgpfaetke; DGPF Domain-Containing; DGPF Protein; Dgpf Domain Protein; Histidine Kinase; DGPF Domain Family; DGPF Domain Protein; Dgpfaetke-Domain Containing Protein; Dgpfaetke Domain; Dgpf Family Protein; Transcription Regulation Protein; DGPF Domain Superfamily; Dgpfaetke Domain-Containing Protein; Glutathione S-Transferase
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRYMMLMIPKGYEAAEPGTLPEADAVGPMMHYNEELQKAGILVSAEGLHPPSMGARVSFAHGLPEVTDGPFAEAKEVLGG FWIIDVGSLEEAIEWAKRCPGSPNETIEIRKIMEMDDFPEDLRAVADGFETMQTKKAK
Sequences:
>Translated_138_residues MRYMMLMIPKGYEAAEPGTLPEADAVGPMMHYNEELQKAGILVSAEGLHPPSMGARVSFAHGLPEVTDGPFAEAKEVLGG FWIIDVGSLEEAIEWAKRCPGSPNETIEIRKIMEMDDFPEDLRAVADGFETMQTKKAK >Mature_138_residues MRYMMLMIPKGYEAAEPGTLPEADAVGPMMHYNEELQKAGILVSAEGLHPPSMGARVSFAHGLPEVTDGPFAEAKEVLGG FWIIDVGSLEEAIEWAKRCPGSPNETIEIRKIMEMDDFPEDLRAVADGFETMQTKKAK
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15169; Mature: 15169
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 7.2 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYMMLMIPKGYEAAEPGTLPEADAVGPMMHYNEELQKAGILVSAEGLHPPSMGARVSFA CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEECC HGLPEVTDGPFAEAKEVLGGFWIIDVGSLEEAIEWAKRCPGSPNETIEIRKIMEMDDFPE CCCCCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCH DLRAVADGFETMQTKKAK HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRYMMLMIPKGYEAAEPGTLPEADAVGPMMHYNEELQKAGILVSAEGLHPPSMGARVSFA CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCEEECC HGLPEVTDGPFAEAKEVLGGFWIIDVGSLEEAIEWAKRCPGSPNETIEIRKIMEMDDFPE CCCCCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCH DLRAVADGFETMQTKKAK HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA