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The map label for this gene is petA [H]

Identifier: 110634515

GI number: 110634515

Start: 2316034

End: 2316606

Strand: Reverse

Name: petA [H]

Synonym: Meso_2166

Alternate gene names: 110634515

Gene position: 2316606-2316034 (Counterclockwise)

Preceding gene: 110634516

Following gene: 110634514

Centisome position: 52.5

GC content: 63.7

Gene sequence:

>573_bases
GTGAGCGATACCGATTCGACCCACATCCCGGAACACAGCCGTCGCGATTTCCTTTACGTAGCCACCGGCATGGCCGGGGC
CGTCGGTGCGGCTGCAGTCGCATGGCCGTTCATCGACCAGATGCGTCCCGATGCCTCCACGCTCGCTCTGGCGTCCATCC
AGGTGGATGTGTCGGCCGTGCAGCCTGGCATGTCGCTGACGGTCAAGTGGCGCGGCCATCCCGTTTTCATCCGCAATCGG
ACCGAGCAGGAAATTGCGGCGGCACAGGAAACGCCGCTCGATCAGCTCAAGGATCCGGTCGCGCGCAACGACAACCTTCC
GGCCGATACGCCGGCGACGGATCTTGCGCGTTCGGCAGGCGAGGGCAAGGAGAACTGGCTCGTCATGATCGGCGTGTGCA
CCCATCTTGGCTGCATTCCGCTTGGCCAGTCGGGTGAGTATGGCGGCTGGTTCTGCCCATGCCACGGTTCGGTCTACGAT
ACGGCAGGGCGCGTCCGCGGTGGACCTGCGCCGGAAAACATGGCCATTCCGGCCTTTCAGTTCATCTCCGACACGGTCGT
TCAGATCGGTTAG

Upstream 100 bases:

>100_bases
ATTGCCGGGGGAACACGTCCGCTCGTCGCGGAGACACTTGATGGGCGCGTGATTTTCCTCGCTTCTTCCGGCAGGCATGA
GGTGAAAGGACCACAGTCCC

Downstream 100 bases:

>100_bases
GCGAAGGGGGCGCATTTCATGAGCGGTGGACATTCTACCTATACACCCAAGACGGGCTTCGGCCGCTGGATAGACGCCCG
CCTTCCGCTGCCGCGTCTCA

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSDTDSTHIPEHSRRDFLYVATGMAGAVGAAAVAWPFIDQMRPDASTLALASIQVDVSAVQPGMSLTVKWRGHPVFIRNR
TEQEIAAAQETPLDQLKDPVARNDNLPADTPATDLARSAGEGKENWLVMIGVCTHLGCIPLGQSGEYGGWFCPCHGSVYD
TAGRVRGGPAPENMAIPAFQFISDTVVQIG

Sequences:

>Translated_190_residues
MSDTDSTHIPEHSRRDFLYVATGMAGAVGAAAVAWPFIDQMRPDASTLALASIQVDVSAVQPGMSLTVKWRGHPVFIRNR
TEQEIAAAQETPLDQLKDPVARNDNLPADTPATDLARSAGEGKENWLVMIGVCTHLGCIPLGQSGEYGGWFCPCHGSVYD
TAGRVRGGPAPENMAIPAFQFISDTVVQIG
>Mature_189_residues
SDTDSTHIPEHSRRDFLYVATGMAGAVGAAAVAWPFIDQMRPDASTLALASIQVDVSAVQPGMSLTVKWRGHPVFIRNRT
EQEIAAAQETPLDQLKDPVARNDNLPADTPATDLARSAGEGKENWLVMIGVCTHLGCIPLGQSGEYGGWFCPCHGSVYDT
AGRVRGGPAPENMAIPAFQFISDTVVQIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=193, Percent_Identity=38.860103626943, Blast_Score=160, Evalue=9e-40,
Organism=Caenorhabditis elegans, GI17540418, Length=192, Percent_Identity=35.4166666666667, Blast_Score=139, Evalue=8e-34,
Organism=Saccharomyces cerevisiae, GI6320811, Length=171, Percent_Identity=42.6900584795322, Blast_Score=163, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24580896, Length=154, Percent_Identity=42.2077922077922, Blast_Score=145, Evalue=1e-35,
Organism=Drosophila melanogaster, GI17864350, Length=110, Percent_Identity=37.2727272727273, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 20276; Mature: 20145

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTDSTHIPEHSRRDFLYVATGMAGAVGAAAVAWPFIDQMRPDASTLALASIQVDVSAV
CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHEEEEEEEEEHHHC
QPGMSLTVKWRGHPVFIRNRTEQEIAAAQETPLDQLKDPVARNDNLPADTPATDLARSAG
CCCCEEEEEECCCEEEEECCCHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCHHHHHHHCC
EGKENWLVMIGVCTHLGCIPLGQSGEYGGWFCPCHGSVYDTAGRVRGGPAPENMAIPAFQ
CCCCCEEEEEEEHHHCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
FISDTVVQIG
HHHHHHHCCC
>Mature Secondary Structure 
SDTDSTHIPEHSRRDFLYVATGMAGAVGAAAVAWPFIDQMRPDASTLALASIQVDVSAV
CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHEEEEEEEEEHHHC
QPGMSLTVKWRGHPVFIRNRTEQEIAAAQETPLDQLKDPVARNDNLPADTPATDLARSAG
CCCCEEEEEECCCEEEEECCCHHHHHHHHCCCHHHHHCCHHCCCCCCCCCCHHHHHHHCC
EGKENWLVMIGVCTHLGCIPLGQSGEYGGWFCPCHGSVYDTAGRVRGGPAPENMAIPAFQ
CCCCCEEEEEEEHHHCCCEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
FISDTVVQIG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2821268; 3004982; 2821272; 1323023; 1313292 [H]