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The map label for this gene is yfiH [C]

Identifier: 110634501

GI number: 110634501

Start: 2303310

End: 2304104

Strand: Direct

Name: yfiH [C]

Synonym: Meso_2152

Alternate gene names: 110634501

Gene position: 2303310-2304104 (Clockwise)

Preceding gene: 110634500

Following gene: 110634502

Centisome position: 52.2

GC content: 62.89

Gene sequence:

>795_bases
ATGCTTGACATGACCAGACCGGAGCCCGTCCGGTCACCCCTCCTTGGCGCTCGTGCCGGGGGTGTAAGGCATGGCTTTTT
TACCCGCCGCGGCGGTGTATCCACAGGGATTTTCGACAGCCTCAATGTCGGCCTCGGCTCGACCGATTCTCCTGAAGCGG
TTCGTGAAAACAGGCGCCGGGTGGCTGCGGCCATGGGTGTACCGGCGGAGCGCCTGGTTACAATCCATCAATGCCATTCG
GCGGAAGTGGTAACGGTCGAGGATCCGTTTCCCATCGATTCCCGCCCCAATGCCGACGGGTTGGTGACGCGCAAGCCCGG
TGTTGCGCTCGGCGTGCTTGCAGCCGACTGCGGGCCGGTTCTCTTTGCGGATACGCAGGCAGGGGTGATCGGTGCTGCCC
ATGCCGGCTGGAAAGGCGCCTTGACCGGTATACTTGAAAACACGATCGACGCCATGGAACGGCTCGGCGCCCGCCGAGAG
CATATCGCAGCCGTGCTTGGCCCCTCGATCAGCCAGGAAAACTATGAAGTCGGGCCGGAATATATACAGCGCTTCATCGG
GGCGGACGAGGATAACGCCCGCTATTTCCGGGACTCCGGCAAGTCCGGCCACGCGCTGTTCGACCTCAATCTCTACACCA
TAGACCGTCTCACCCGGGCCGGGATTAAGGCCGAAGCGCTCGGGCGCTGCACCTATGCGCAGGAGGACGATTTCTTCTCC
TACCGCAGGGCCGCCCACCGCGGCGAACCGGACTACGGACGCCAGATCTCGGCGATTTGCCTGGAGGTATCCTGA

Upstream 100 bases:

>100_bases
TTGGCTGTCGAGAGCATTAGACTGCAAGATCAAACCTGATTGACATTGCCCCTTTCCTTCCCCCACGATCCGCGCTCCGA
AACAGACCGGAAGGCAGCGC

Downstream 100 bases:

>100_bases
TGGCCTTGCATTTCGAACGTGCCGAATTCGACGCACGCCGCGACAGGCTGCTCATAGAAATGTCGGAACGCAAACTGGAT
GCCATGCTGCTCTTCGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLDMTRPEPVRSPLLGARAGGVRHGFFTRRGGVSTGIFDSLNVGLGSTDSPEAVRENRRRVAAAMGVPAERLVTIHQCHS
AEVVTVEDPFPIDSRPNADGLVTRKPGVALGVLAADCGPVLFADTQAGVIGAAHAGWKGALTGILENTIDAMERLGARRE
HIAAVLGPSISQENYEVGPEYIQRFIGADEDNARYFRDSGKSGHALFDLNLYTIDRLTRAGIKAEALGRCTYAQEDDFFS
YRRAAHRGEPDYGRQISAICLEVS

Sequences:

>Translated_264_residues
MLDMTRPEPVRSPLLGARAGGVRHGFFTRRGGVSTGIFDSLNVGLGSTDSPEAVRENRRRVAAAMGVPAERLVTIHQCHS
AEVVTVEDPFPIDSRPNADGLVTRKPGVALGVLAADCGPVLFADTQAGVIGAAHAGWKGALTGILENTIDAMERLGARRE
HIAAVLGPSISQENYEVGPEYIQRFIGADEDNARYFRDSGKSGHALFDLNLYTIDRLTRAGIKAEALGRCTYAQEDDFFS
YRRAAHRGEPDYGRQISAICLEVS
>Mature_264_residues
MLDMTRPEPVRSPLLGARAGGVRHGFFTRRGGVSTGIFDSLNVGLGSTDSPEAVRENRRRVAAAMGVPAERLVTIHQCHS
AEVVTVEDPFPIDSRPNADGLVTRKPGVALGVLAADCGPVLFADTQAGVIGAAHAGWKGALTGILENTIDAMERLGARRE
HIAAVLGPSISQENYEVGPEYIQRFIGADEDNARYFRDSGKSGHALFDLNLYTIDRLTRAGIKAEALGRCTYAQEDDFFS
YRRAAHRGEPDYGRQISAICLEVS

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=250, Percent_Identity=32.4, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI190194372, Length=250, Percent_Identity=32.4, Blast_Score=99, Evalue=5e-21,
Organism=Escherichia coli, GI1788945, Length=236, Percent_Identity=36.0169491525424, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28464; Mature: 28464

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDMTRPEPVRSPLLGARAGGVRHGFFTRRGGVSTGIFDSLNVGLGSTDSPEAVRENRRR
CCCCCCCCCHHCCHHHCCCCCCCCCCEECCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH
VAAAMGVPAERLVTIHQCHSAEVVTVEDPFPIDSRPNADGLVTRKPGVALGVLAADCGPV
HHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCE
LFADTQAGVIGAAHAGWKGALTGILENTIDAMERLGARREHIAAVLGPSISQENYEVGPE
EEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHH
YIQRFIGADEDNARYFRDSGKSGHALFDLNLYTIDRLTRAGIKAEALGRCTYAQEDDFFS
HHHHHHCCCCCCCHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHCCCCCCCCCHHH
YRRAAHRGEPDYGRQISAICLEVS
HHHHHHCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MLDMTRPEPVRSPLLGARAGGVRHGFFTRRGGVSTGIFDSLNVGLGSTDSPEAVRENRRR
CCCCCCCCCHHCCHHHCCCCCCCCCCEECCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHH
VAAAMGVPAERLVTIHQCHSAEVVTVEDPFPIDSRPNADGLVTRKPGVALGVLAADCGPV
HHHHHCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCE
LFADTQAGVIGAAHAGWKGALTGILENTIDAMERLGARREHIAAVLGPSISQENYEVGPE
EEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHH
YIQRFIGADEDNARYFRDSGKSGHALFDLNLYTIDRLTRAGIKAEALGRCTYAQEDDFFS
HHHHHHCCCCCCCHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHCCCCCCCCCHHH
YRRAAHRGEPDYGRQISAICLEVS
HHHHHHCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]