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The map label for this gene is 110634477

Identifier: 110634477

GI number: 110634477

Start: 2282693

End: 2283913

Strand: Reverse

Name: 110634477

Synonym: Meso_2128

Alternate gene names: NA

Gene position: 2283913-2282693 (Counterclockwise)

Preceding gene: 110634480

Following gene: 110634476

Centisome position: 51.76

GC content: 59.13

Gene sequence:

>1221_bases
ATGAAGATTGCTGTTCTCGGCGGCGACGGATTTGTCGGCTGGCCGACTTCCCTCCATCTTTCCGCACGAGGCCATGAAGT
CCATATCCTCGACAATCTCTCCCGTCGCTGGATAGACACCGAACTCGGCGTGCAATCGCTGACGCCGATGGATTCGATTC
AGGAGCGTACGCGAATTTGGCACCAGGAAACGGGTCGTCGCATTCGTTTCCATTTGATCGATCTTGCGGGGGACTATGAG
ATCCTGAAGCGCTGGCTTGCCGAGCATCGCCCGGACGCCGTCATTCACTTCGCCGAGCAGCGCGCAGCGCCTTATTCGAT
GAAGAGCGACCGCCACAAGAACTACACGGTGAACAATAACGTCAACGCAACCCATAACCTCCTGAATGCGCTGGTCGAGG
TCGGGCTCGATGCGCATCTCGTGCATTTGGGCACGATGGGCGTCTACGGATATTCGAGCGTCGGCGCGGCCATCCCCGAA
GGCTATCTGCCGGTCGGCGTCGAGACGCTTTCGGGCGAAACGGCCACGCAGGAAATCCTCTATCCCGCCAATCCAGGCTC
CATTTACCACATGACCAAATGCCTGGATCAGCTCCTGTTCCAGTTCTATGCCAAGAATGACGGCCTTAGGATCACCGATC
TCCATCAGGGCATCGTCTGGGGCACCCATACGCAGGAAACCAAGCTGCACGCGCAGCTTATCAACCGCTTCGATTATGAC
GGGGACTACGGCACCGTCCTCAACCGGTTCCTCATTCAGGCGGCGATCGGTTATCCGCTCACTGTGCATGGTACCGGCGG
GCAGACCAGAGCGTTCATCCACATTCAGGATTCCGTACGCTGCATTGAGCTTGCTCTGACGAATCCTCCGAAGCGGGGAG
ACCGCGTGAAGATCTTCAACCAGATGACGGAAACGCACCGGGTCCGCGATCTGGCCGAGCTTATCGCCCGCATGACCGGG
GCCAAGGTCGCCTATCTTCCCAACCCCCGCAAGGAAGCGCCGGAGAACGATCTGGTGGTGGAGAACGAGCAATTCCTTAA
GCTCGGCCTCAATCCGACAACCCTGGCGGAGGGGCTGCTGTCCGAGGTGGTCGACGTGGCGAAGAAATTTGCTTACCGCG
TAGACCGCAGCCGAATCCCTTGCGTCTCGGCTTGGACCAAGGACCTGGCGCCTACGCTCGAACGCGACCCGGAAGGCAAG
CGGCTGAAAAGCGTCGGGTGA

Upstream 100 bases:

>100_bases
GCTCGAAGCTTCGCTTTTCAACCCCGCAAGCAGAGGCATAGAATTCCTGTCACAAATAGCGGATAAGCCGCCTAATGATT
GGCGATAGAGGTTCGATTCG

Downstream 100 bases:

>100_bases
GGGCGGGTCGAGGGTGGTGAAAGAACGTTCTGCTTTGCCCAATGGCTAAGGAATACGCCTACGTCACCCTCGTCACCAAT
GCCGACTATGCGATGGGCGC

Product: UDP-sulfoquinovose synthase

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase; Sulfolipid Biosynthesis Protein; NAD Dependent Epimerase/Dehydratase Family; Sulfolipid Biosynthesis Protein SqdB; Epimerase; UDP Sulfoquinovose Synthase; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKIAVLGGDGFVGWPTSLHLSARGHEVHILDNLSRRWIDTELGVQSLTPMDSIQERTRIWHQETGRRIRFHLIDLAGDYE
ILKRWLAEHRPDAVIHFAEQRAAPYSMKSDRHKNYTVNNNVNATHNLLNALVEVGLDAHLVHLGTMGVYGYSSVGAAIPE
GYLPVGVETLSGETATQEILYPANPGSIYHMTKCLDQLLFQFYAKNDGLRITDLHQGIVWGTHTQETKLHAQLINRFDYD
GDYGTVLNRFLIQAAIGYPLTVHGTGGQTRAFIHIQDSVRCIELALTNPPKRGDRVKIFNQMTETHRVRDLAELIARMTG
AKVAYLPNPRKEAPENDLVVENEQFLKLGLNPTTLAEGLLSEVVDVAKKFAYRVDRSRIPCVSAWTKDLAPTLERDPEGK
RLKSVG

Sequences:

>Translated_406_residues
MKIAVLGGDGFVGWPTSLHLSARGHEVHILDNLSRRWIDTELGVQSLTPMDSIQERTRIWHQETGRRIRFHLIDLAGDYE
ILKRWLAEHRPDAVIHFAEQRAAPYSMKSDRHKNYTVNNNVNATHNLLNALVEVGLDAHLVHLGTMGVYGYSSVGAAIPE
GYLPVGVETLSGETATQEILYPANPGSIYHMTKCLDQLLFQFYAKNDGLRITDLHQGIVWGTHTQETKLHAQLINRFDYD
GDYGTVLNRFLIQAAIGYPLTVHGTGGQTRAFIHIQDSVRCIELALTNPPKRGDRVKIFNQMTETHRVRDLAELIARMTG
AKVAYLPNPRKEAPENDLVVENEQFLKLGLNPTTLAEGLLSEVVDVAKKFAYRVDRSRIPCVSAWTKDLAPTLERDPEGK
RLKSVG
>Mature_406_residues
MKIAVLGGDGFVGWPTSLHLSARGHEVHILDNLSRRWIDTELGVQSLTPMDSIQERTRIWHQETGRRIRFHLIDLAGDYE
ILKRWLAEHRPDAVIHFAEQRAAPYSMKSDRHKNYTVNNNVNATHNLLNALVEVGLDAHLVHLGTMGVYGYSSVGAAIPE
GYLPVGVETLSGETATQEILYPANPGSIYHMTKCLDQLLFQFYAKNDGLRITDLHQGIVWGTHTQETKLHAQLINRFDYD
GDYGTVLNRFLIQAAIGYPLTVHGTGGQTRAFIHIQDSVRCIELALTNPPKRGDRVKIFNQMTETHRVRDLAELIARMTG
AKVAYLPNPRKEAPENDLVVENEQFLKLGLNPTTLAEGLLSEVVDVAKKFAYRVDRSRIPCVSAWTKDLAPTLERDPEGK
RLKSVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45581; Mature: 45581

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVLGGDGFVGWPTSLHLSARGHEVHILDNLSRRWIDTELGVQSLTPMDSIQERTRIW
CEEEEEECCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHCCHHHCCCHHHHHHHHHHH
HQETGRRIRFHLIDLAGDYEILKRWLAEHRPDAVIHFAEQRAAPYSMKSDRHKNYTVNNN
HHHCCCEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCCCEEECCC
VNATHNLLNALVEVGLDAHLVHLGTMGVYGYSSVGAAIPEGYLPVGVETLSGETATQEIL
CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCEEECCCCCCHHHEE
YPANPGSIYHMTKCLDQLLFQFYAKNDGLRITDLHQGIVWGTHTQETKLHAQLINRFDYD
ECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHCCCC
GDYGTVLNRFLIQAAIGYPLTVHGTGGQTRAFIHIQDSVRCIELALTNPPKRGDRVKIFN
CCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEHHHH
QMTETHRVRDLAELIARMTGAKVAYLPNPRKEAPENDLVVENEQFLKLGLNPTTLAEGLL
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEECCCHHEEECCCHHHHHHHHH
SEVVDVAKKFAYRVDRSRIPCVSAWTKDLAPTLERDPEGKRLKSVG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHCCCCCCCHHCCCC
>Mature Secondary Structure
MKIAVLGGDGFVGWPTSLHLSARGHEVHILDNLSRRWIDTELGVQSLTPMDSIQERTRIW
CEEEEEECCCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHCCHHHCCCHHHHHHHHHHH
HQETGRRIRFHLIDLAGDYEILKRWLAEHRPDAVIHFAEQRAAPYSMKSDRHKNYTVNNN
HHHCCCEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCCCEEECCC
VNATHNLLNALVEVGLDAHLVHLGTMGVYGYSSVGAAIPEGYLPVGVETLSGETATQEIL
CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCEEECCCCCCHHHEE
YPANPGSIYHMTKCLDQLLFQFYAKNDGLRITDLHQGIVWGTHTQETKLHAQLINRFDYD
ECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHCCCC
GDYGTVLNRFLIQAAIGYPLTVHGTGGQTRAFIHIQDSVRCIELALTNPPKRGDRVKIFN
CCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEHHHH
QMTETHRVRDLAELIARMTGAKVAYLPNPRKEAPENDLVVENEQFLKLGLNPTTLAEGLL
HHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEECCCHHEEECCCHHHHHHHHH
SEVVDVAKKFAYRVDRSRIPCVSAWTKDLAPTLERDPEGKRLKSVG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA