| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110634476
Identifier: 110634476
GI number: 110634476
Start: 2281836
End: 2282651
Strand: Reverse
Name: 110634476
Synonym: Meso_2127
Alternate gene names: NA
Gene position: 2282651-2281836 (Counterclockwise)
Preceding gene: 110634477
Following gene: 110634475
Centisome position: 51.73
GC content: 58.58
Gene sequence:
>816_bases ATGGCTAAGGAATACGCCTACGTCACCCTCGTCACCAATGCCGACTATGCGATGGGCGCAACGGCGCTGGTGCGTTCCCT TCAGCGCACGAATACGTCCGCCGAAATCGTGGTGATGCATACCGGAGGGGTGGATGCGGCTGCATTGGCGCCGCTTGGCA GGCTCGGCGCGCTGCTGCTCCAGGCGGAGCTCCTTCCCACTTCCGCGGCCTTCAACGAGCGCCATCAGCGCGCGCGGCTT CATTCGAACGCCCCTTTTACCAAAGGCAACAAGCCTGCCTTCCACACGCCGCTCGATAATTTCGCAAAGCTGCGCCTTTG GCAGCTCACGCAATATAAGCGCGTGGTCTTCATCGACGCCGATGCAATCGTCATCCGCAACATCGACCGGCTGTTTTCCT ATCCCGAGTTCTCCGCCGCGCCCAATGTCTATGAAAGCCTTGAGGATTTCCACCGGCTCAATTCCGGGGTTTTCGTAGCG CGGCCGTCGGCTGAAACCTTTCGGGCCATGCTCTCCGTCCTTGACCAGCCCGACGCATTCTGGCGCCGCACGGACCAAAC CTTTCTGCAGACATTTTTCCCGGACTGGCATGGCTTGCCCGTCTTTTTCAACATGCTCCAATATGTCTGGTTCAATCTGC CGGAGCTTTGGGACTGGAACTCGGTCTCGGTGGTTCATTATCAGTATGAAAAGCCGTGGGAGAGGGATCACGCCAAGGCG GAGGCGCTGAAGCCGCTGATTGACCTCTGGCATTCCTATTATTCCGGTGAAGACATTCCCGAGGCCGGATTGCTGGCCAA TCCGCTGAAGCCATGA
Upstream 100 bases:
>100_bases ACCTGGCGCCTACGCTCGAACGCGACCCGGAAGGCAAGCGGCTGAAAAGCGTCGGGTGAGGGCGGGTCGAGGGTGGTGAA AGAACGTTCTGCTTTGCCCA
Downstream 100 bases:
>100_bases GCGCAACGCGCAGCTTTGTTTCCGGCGGAACAGGCTATGTCGGCCGCTTCATCGTCGAGGAACTTTTAGCGGCCGGCCAC CAGGTCACGGTAATGGGGCG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase Protein; Glycosyltransferase Family 8 Protein; Glycosyl Transferase Protein; Glycosyl Transferase
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MAKEYAYVTLVTNADYAMGATALVRSLQRTNTSAEIVVMHTGGVDAAALAPLGRLGALLLQAELLPTSAAFNERHQRARL HSNAPFTKGNKPAFHTPLDNFAKLRLWQLTQYKRVVFIDADAIVIRNIDRLFSYPEFSAAPNVYESLEDFHRLNSGVFVA RPSAETFRAMLSVLDQPDAFWRRTDQTFLQTFFPDWHGLPVFFNMLQYVWFNLPELWDWNSVSVVHYQYEKPWERDHAKA EALKPLIDLWHSYYSGEDIPEAGLLANPLKP
Sequences:
>Translated_271_residues MAKEYAYVTLVTNADYAMGATALVRSLQRTNTSAEIVVMHTGGVDAAALAPLGRLGALLLQAELLPTSAAFNERHQRARL HSNAPFTKGNKPAFHTPLDNFAKLRLWQLTQYKRVVFIDADAIVIRNIDRLFSYPEFSAAPNVYESLEDFHRLNSGVFVA RPSAETFRAMLSVLDQPDAFWRRTDQTFLQTFFPDWHGLPVFFNMLQYVWFNLPELWDWNSVSVVHYQYEKPWERDHAKA EALKPLIDLWHSYYSGEDIPEAGLLANPLKP >Mature_270_residues AKEYAYVTLVTNADYAMGATALVRSLQRTNTSAEIVVMHTGGVDAAALAPLGRLGALLLQAELLPTSAAFNERHQRARLH SNAPFTKGNKPAFHTPLDNFAKLRLWQLTQYKRVVFIDADAIVIRNIDRLFSYPEFSAAPNVYESLEDFHRLNSGVFVAR PSAETFRAMLSVLDQPDAFWRRTDQTFLQTFFPDWHGLPVFFNMLQYVWFNLPELWDWNSVSVVHYQYEKPWERDHAKAE ALKPLIDLWHSYYSGEDIPEAGLLANPLKP
Specific function: Unknown
COG id: COG5597
COG function: function code M; Alpha-N-acetylglucosamine transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI296040505, Length=257, Percent_Identity=32.295719844358, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI20127457, Length=257, Percent_Identity=32.295719844358, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI296040507, Length=224, Percent_Identity=32.1428571428571, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI296040445, Length=239, Percent_Identity=30.5439330543933, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI119943093, Length=239, Percent_Identity=30.5439330543933, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI296040440, Length=239, Percent_Identity=30.5439330543933, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI119964690, Length=239, Percent_Identity=30.5439330543933, Blast_Score=85, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17564678, Length=237, Percent_Identity=29.957805907173, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17568217, Length=237, Percent_Identity=30.379746835443, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI25153118, Length=237, Percent_Identity=30.379746835443, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17568215, Length=237, Percent_Identity=30.379746835443, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI193210943, Length=201, Percent_Identity=23.8805970149254, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24656813, Length=239, Percent_Identity=31.3807531380753, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI281363907, Length=239, Percent_Identity=31.3807531380753, Blast_Score=100, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30974; Mature: 30843
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKEYAYVTLVTNADYAMGATALVRSLQRTNTSAEIVVMHTGGVDAAALAPLGRLGALLL CCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH QAELLPTSAAFNERHQRARLHSNAPFTKGNKPAFHTPLDNFAKLRLWQLTQYKRVVFIDA HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC DAIVIRNIDRLFSYPEFSAAPNVYESLEDFHRLNSGVFVARPSAETFRAMLSVLDQPDAF CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHH WRRTDQTFLQTFFPDWHGLPVFFNMLQYVWFNLPELWDWNSVSVVHYQYEKPWERDHAKA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHH EALKPLIDLWHSYYSGEDIPEAGLLANPLKP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKEYAYVTLVTNADYAMGATALVRSLQRTNTSAEIVVMHTGGVDAAALAPLGRLGALLL CCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH QAELLPTSAAFNERHQRARLHSNAPFTKGNKPAFHTPLDNFAKLRLWQLTQYKRVVFIDA HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC DAIVIRNIDRLFSYPEFSAAPNVYESLEDFHRLNSGVFVARPSAETFRAMLSVLDQPDAF CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHH WRRTDQTFLQTFFPDWHGLPVFFNMLQYVWFNLPELWDWNSVSVVHYQYEKPWERDHAKA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHH EALKPLIDLWHSYYSGEDIPEAGLLANPLKP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA